Gene
| Gene Model ID | habu1_s1961_g07145 |
|---|---|
| Locus | habu1_scaffold1961 : 864515 ... 870026 : - |
| To GenomeBrowser | habu1_scaffold1961:864515..870026 |
| Genes list of scaffold | habu1_scaffold1961 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| heat shock protein beta-2 | GO:0005212 GO:0007423 GO:0046872 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1961_g07145.t2 | 1 | 1 | Crystallin | 7 | 40 | 1.8e-06 | 28.0 | 8.1e-10 | 6.0e-06 | 26.3 |
| habu1_s1961_g07145.t2 | 1 | 1 | HSP20 | 54 | 148 | 9.4e-21 | 73.5 | 1.6e-24 | 1.2e-20 | 73.2 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 1.2 |
| Venom grand-1 | 34.7 |
| Pit, infrared sensing | 3.4 |
| Nose | 0.7 |
| Brain-1 | 0.4 |
| Eye | 2.9 |
| fetal fibroblast | 0.3 |
| venom gland-2 | 2.7 |
| Brain-2 | 0.5 |
| Spleen | 0.2 |
| Lung | 1.7 |
| Liver | 0.0 |
| Kidney | 0.3 |
| Pancreas | 0.0 |
| Small intestine | 0.6 |
| Large intestine | 3.2 |
| Stomach | 1.1 |
| heart | 129.1 |
| ovary | 2.7 |
| cheek muscle | 383.9 |
Transcript
| Transcript ID | habu1_s1961_g07145.t1 |
|---|---|
| Definition | - |
>habu1_s1961_g07145.t1 ttcggtccatcttttatcacttcctcctcccggtggaatttgctttccaagtgtcccaattggccagccagccggctggc tacagccttcccaaggaaggcgctggggagcaagcacatctacacagctttctcatcatggctcagcagcacagcctgcc ccacgcctaccccatgagcccggaatgcgagtttgccaaccccagcaagatttacgaccagaattttggagaaggccccg gattaacaaacagctggaacgagggatttcagaggtcaccctgaatgaacacaaattccaggtcttccttgatgtttgcc agttcacccccgatgaaatcgctgtccgcactgtggacaacctcctggaggtgacagcccagcatcctcagaaagttgac cgacatggattcatctcccgggaattcacccgaacctacatcctgcccttggatgtcgatcccttgtcagtcaaagccac tgtgacccacgatggcatcctgagcgttgaagtccggcggacgggaaaggaagtgaaggccaaagtcaacgaggtggaag tcaccagccaaggacaaccagaaaggaaagcaggaagttcaggagagacctcacatccctaaaacatccttctaggatgg cccattttgggatacgttgagtaggtgaatttggaagtggtctttcatggacaccaaaggccaggcctagttggtctcct tggcttcatcttttcctccccaaatatctagggttttcattccaagaagcttctcccacaaggtcttcagagctacagct tatccttttagatgtcttctaaccttcgttcatcaaaaatataattccccggattataatggaagacagtaaaggccact gcaccagtttgaaacctttttgtttctcactttgaacagggggcttaagtgcaacgcccattggagtccaaatggacatc tcttcagaagaacgtttcctgtggatctgaatggctggcggtgcagactctcaaacggttcccccaagtttatccattat tcagatgaccctcgttccattttcttgcaagagcaacacacccggttttccagatttatcctgacgaaatctcagcaggg agaatttggannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnggggggggggggagagggagat gtcaagtgaaaaattggacctgcgtctgttcgttaaaattcaaaattcaaccgctggtggttcatctatttgccataaat tggactttgctttcctggggt |
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| Transcript ID | habu1_s1961_g07145.t2 |
| Definition | - |
>habu1_s1961_g07145.t2 ttcggtccatcttttatcacttcctcctcccggtggaatttgctttccaagtgtcccaattggccagccagccggctggc tacagccttcccaaggaaggcgctggggagcaagcacatctacacagctttctcatcatggctcagcagcacagcctgcc ccacgcctaccccatgagcccggaatgcgagtttgccaaccccagcaagatttacgaccagaattttggagaaggccttt cccctggagatattctggctccaactttgtaccatggttattatatcaggccccggattaacaaacagctggaacgaggg atttcagaggtcaccctgaatgaacacaaattccaggtcttccttgatgtttgccagttcacccccgatgaaatcgctgt ccgcactgtggacaacctcctggaggtgacagcccagcatcctcagaaagttgaccgacatggattcatctcccgggaat tcacccgaacctacatcctgcccttggatgtcgatcccttgtcagtcaaagccactgtgacccacgatggcatcctgagc gttgaagtccggcggacgggaaaggaagtgaaggccaaagtcaacgaggtggaagtcaccagccaaggacaaccagaaag gaaagcaggaagttcaggagagacctcacatccctaaaacatccttctaggatggcccattttgggatacgttgagtagg tgaatttggaagtggtctttcatggacaccaaaggccaggcctagttggtctccttggcttcatcttttcctccccaaat atctagggttttcattccaagaagcttctcccacaaggtcttcagagctacagcttatccttttagatgtcttctaacct tcgttcatcaaaaatataattccccggattataatggaagacagtaaaggccactgcaccagtttgaaacctttttgttt ctcactttgaacagggggcttaagtgcaacgcccattggagtccaaatggacatctcttcagaagaacgtttcctgtgga tctgaatggctggcggtgcagactctcaaacggttcccccaagtttatccattattcagatgaccctcgttccattttct tgcaagagcaacacacccggttttccagatttatcctgacgaaatctcagcagggagaatttggannnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnggggggggggggagagggagatgtcaagtgaaaaattggacctgcgt ctgttcgttaaaattcaaaattcaaccgctggtggttcatctatttgccataaattggactttgctttcctggggt |
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Protein
| Protein ID | habu1_s1961_g07145.t1 |
|---|---|
| Definition | - |
>habu1_s1961_g07145.t1 MRVCQPQQDLRPEFWRRPRINKQLERGISEVTLNEHKFQVFLDVCQFTPDEIAVRTVDNLLEVTAQHPQKVDRHGFISRE FTRTYILPLDVDPLSVKATVTHDGILSVEVRRTGKEVKAKVNEVEVTSQGQPERKAGSSGETSHP |
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| Protein ID | habu1_s1961_g07145.t2 |
| Definition | - |
>habu1_s1961_g07145.t2 MSPECEFANPSKIYDQNFGEGLSPGDILAPTLYHGYYIRPRINKQLERGISEVTLNEHKFQVFLDVCQFTPDEIAVRTVD NLLEVTAQHPQKVDRHGFISREFTRTYILPLDVDPLSVKATVTHDGILSVEVRRTGKEVKAKVNEVEVTSQGQPERKAGS SGETSHP |
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