Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s1961_g07155
Locus habu1_scaffold1961 : 1076388 ... 1104636 : -
To GenomeBrowser habu1_scaffold1961:1076388..1104636
Genes list of scaffold habu1_scaffold1961

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s1961_g07155.t1 gi|602669707|ref|XP_007440388.1| PREDICTED: uncharacterized protein LOC103062826 [Python bivittatus] 0.0
habu1_s1961_g07155.t1 gi|602669709|ref|XP_007440389.1| PREDICTED: uncharacterized protein C11orf53 homolog [Python bivittatus] 0.0
habu1_s1961_g07155.t1 gi|327286164|ref|XP_003227801.1| PREDICTED: uncharacterized protein C11orf53 homolog [Anolis carolinensis] 0.0
habu1_s1961_g07155.t1 gi|637356254|ref|XP_008119289.1| PREDICTED: colorectal cancer-associated protein 2 [Anolis carolinensis] 0.0
habu1_s1961_g07155.t1 gi|699653096|ref|XP_009880785.1| PREDICTED: uncharacterized protein C11orf53 homolog [Charadrius vociferus] 0.0

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 0.2
Venom grand-1 0.0
Pit, infrared sensing 0.1
Nose 1.5
Brain-1 0.0
Eye 0.0
fetal fibroblast 0.0
venom gland-2 0.0
Brain-2 0.0
Spleen 0.0
Lung 0.8
Liver 0.0
Kidney 0.0
Pancreas 0.3
Small intestine 0.1
Large intestine 0.0
Stomach 1.5
heart 0.0
ovary 0.2
cheek muscle 0.0

Transcript
Transcript IDhabu1_s1961_g07155.t1
Definition-
>habu1_s1961_g07155.t1
gcagaaattgcacctcaaagcaatacttttattaggcgtattagaaaatcacccttccaaacatccctggagaatattca
aacagctctgtatcaggaccatggtttttagtgcttggatagaaaacaaagttgcattgcctaaagtagaatgtttttat
tattatttttattattacatttatatgcccgttttgcctagagggagagagaaataattcctgttgagcatggaaactgt
ccccgcagactacagcaaacgtgtttatcaaggtgtgcgtgtcaaacacacagtgaaggatctgctggctgaaaagcgct
caaggcagacgagcagtttgcgacggaatggaagtgttgtgagctctcaaccatcgtttgttccactgcccagttctccc
acagcatccggttattatggagttcgaagaaccttggcgacagacatggacttacacaacaacaaagatatctccagcga
agtctacacttcctccttgctacccaagtcattggcttatgaatcaccagcaactcaaggatattctttgtctctggatg
cccacttaatcgatcagtatgtggaccaccgggctggatctatcccctctggagcttctgctgtccttggcaactcaaca
tcatcctttccaagcgattcacctcattattttagtagagactcctgggaacaatctgtgccggacaactttgccctttg
tgactcagtgtaccgcacggatcccagcccatttggtaaactgaacctcagaggacttatggctgagtacaatgtgcaag
atttggccgctgaacgtagaaaaacccagcggtgtgaaaggcagggcgcaaacctggaggagagaatgaagaaaaaaaaa
tgtccctgttctcccatggaaagcacatcagaaaggattaaagaggtttttggagaatgcagcagaaacatccaggctgg
tgaggctttttcacctccctgcacagttccttacatcaacacggctcctgaatcttccttatccggcggtttaccacctt
ggcagttccagaacgggagctcctgcgaggaaattccccattatttggagcagctggtggactcttgccttcaagctgag
ccactgctggaggtgcccttggccctggcacaggacaacctggcctgctcacctgagagcttccagccagccctcacctg
cctgggttccggatcccccgaggctcccgatccctccagcgccttcgattacagctattccccatctcagatgcctcctt
tcgccccactcggctacagctgcccggctctggaaggcaggagttgcatgtattcgcccccagaggaaagcacctgccaa
cctcaaaaccacgtcccacacacctccggcctatcgacgtgctactgcaccccgtgcggttcccagcacttggacacttt
tcgagcttccgaattctttccctacgccaccctggattgcaaagactatgccccttcagtctctgtgacggatgacttct
ggaaggataggagttgggacctgtgctacagttagcctagcgacggccgcccgcacttgtgaatgcaggagttctctgga
ctcaggtcccccattgtgggtttgccaagggctccaaatgatacctttctcaggtcaaccaacatggaaagggcaggatg
caagctttagggcaggggtcttcaaccgtggccacctgaagacttctggacttcaactcccagaattccccagccagcca
cgggagatgaagtccataagtcttcaagcagccaaggatggacacgcctgatttagaggtttctggaattcatcaatggg
ttgagtagaaagtgaggaatccttctaaaaaccatgatttgggctaaaacaacctgtctccactaagatttgctgtgaaa
tatccaaattctgtaccaagagaaattgatttctgcaacctgttgggtgcatttgcaaactgcctcttattttgtataat
ttgttgtgctctgcactctgaccctggtccttccagtaccatcttattcgacaattttctccattctggtgtttgccatg
ccatcaatggaagcccatatgagccacatttccaagagctaagaatgcactttaaagaacaatcaataaatcaattgtga
tattttttttac

Protein
Protein IDhabu1_s1961_g07155.t1
Definition-
>habu1_s1961_g07155.t1
METVPADYSKRVYQGVRVKHTVKDLLAEKRSRQTSSLRRNGSVVSSQPSFVPLPSSPTASGYYGVRRTLATDMDLHNNKD
ISSEVYTSSLLPKSLAYESPATQGYSLSLDAHLIDQYVDHRAGSIPSGASAVLGNSTSSFPSDSPHYFSRDSWEQSVPDN
FALCDSVYRTDPSPFGKLNLRGLMAEYNVQDLAAERRKTQRCERQGANLEERMKKKKCPCSPMESTSERIKEVFGECSRN
IQAGEAFSPPCTVPYINTAPESSLSGGLPPWQFQNGSSCEEIPHYLEQLVDSCLQAEPLLEVPLALAQDNLACSPESFQP
ALTCLGSGSPEAPDPSSAFDYSYSPSQMPPFAPLGYSCPALEGRSCMYSPPEESTCQPQNHVPHTSGLSTCYCTPCGSQH
LDTFRASEFFPYATLDCKDYAPSVSVTDDFWKDRSWDLCYS

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Chromosome
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495