Gene
| Gene Model ID | habu1_s1961_g07160 |
|---|---|
| Locus | habu1_scaffold1961 : 1183107 ... 1213974 : + |
| To GenomeBrowser | habu1_scaffold1961:1183107..1213974 |
| Genes list of scaffold | habu1_scaffold1961 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| e3 ubiquitin-protein ligase cbl | GO:0003824 GO:0008152 GO:0009987 GO:0023052 GO:0046872 GO:0050789 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1961_g07160.t1 | 1 | 1 | Cbl_N | 32 | 160 | 0.0 | 240.9 | 0.0 | 0.0 | 240.1 |
| habu1_s1961_g07160.t1 | 1 | 1 | Cbl_N2 | 162 | 246 | 2.8026e-45 | 151.9 | 0.0 | 7.00649e-45 | 150.9 |
| habu1_s1961_g07160.t1 | 1 | 1 | Cbl_N3 | 248 | 333 | 0.0 | 178.4 | 0.0 | 0.0 | 177.4 |
| habu1_s1961_g07160.t1 | 1 | 1 | zf-C3HC4_3 | 364 | 408 | 4.9e-10 | 38.9 | 7.5e-13 | 8.5e-10 | 38.1 |
| habu1_s1961_g07160.t1 | 1 | 1 | zf-C3HC4 | 365 | 403 | 4.9e-09 | 35.7 | 8.6e-12 | 9.8e-09 | 34.7 |
| habu1_s1961_g07160.t1 | 1 | 1 | zf-C3HC4_2 | 365 | 403 | 3.7e-08 | 33.2 | 7.3e-11 | 8.3e-08 | 32.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1961_g07160.t1 | gi|602667579|ref|XP_007439350.1| | PREDICTED: E3 ubiquitin-protein ligase CBL [Python bivittatus] | 0.0 |
| habu1_s1961_g07160.t1 | gi|637366511|ref|XP_003229125.2| | PREDICTED: E3 ubiquitin-protein ligase CBL [Anolis carolinensis] | 0.0 |
| habu1_s1961_g07160.t1 | gi|45383704|ref|NP_989539.1| | E3 ubiquitin-protein ligase CBL [Gallus gallus] | 0.0 |
| habu1_s1961_g07160.t1 | gi|530633654|ref|XP_005303834.1| | PREDICTED: E3 ubiquitin-protein ligase CBL [Chrysemys picta bellii] | 0.0 |
| habu1_s1961_g07160.t1 | gi|543375797|ref|XP_005531110.1| | PREDICTED: E3 ubiquitin-protein ligase CBL [Pseudopodoces humilis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 3.7 |
| Venom grand-1 | 2.2 |
| Pit, infrared sensing | 4.7 |
| Nose | 4.3 |
| Brain-1 | 4.4 |
| Eye | 3.9 |
| fetal fibroblast | 5.2 |
| venom gland-2 | 2.8 |
| Brain-2 | 4.3 |
| Spleen | 5.5 |
| Lung | 12.6 |
| Liver | 2.9 |
| Kidney | 6.6 |
| Pancreas | 2.2 |
| Small intestine | 2.6 |
| Large intestine | 3.5 |
| Stomach | 2.9 |
| heart | 4.5 |
| ovary | 8.6 |
| cheek muscle | 5.0 |
Transcript
| Transcript ID | habu1_s1961_g07160.t1 |
|---|---|
| Definition | - |
>habu1_s1961_g07160.t1 ggccgctgcccgagccggggcgccgcggcaagggaccccccctcagccgcccgcgctccctcagcccgctcgcggggccc ggcgggggcgccgccgccgcctcctgcccccctccccatggcggccccgctgaaaaagggccccgggggcctcatcggcc tcatgaaggacgccttccagccgcaccaccaccacctcggcccgcaccagcccagcaccgtggacaagaagatggttgag aagtgctggaagctgatggacaaggttgtgcgtttatgtcagaaccccaagctggcactcaagaacagtcctccctacat tctagacctgcttcccgacacctaccagcacctgcgaaccgtcctgtcctgctacgagggaaagatggagactctgggag aaaacgaatacttccgggtgttcatggaaaacctgatgaagaagacaaaacaaaccatcagcctctttaaagaaggaaaa gaaagaatgtatgaagagaattcccagcctaggcgcaacctgaccaaattgtctctgatcttcagccacatgttggcaga actgaaaggcatatttccaaacggactcttccaaggagacactttccgaatcactaaagcagacgcagcagagttttgga gaaaagcctttgaggagaagaccattgtcccatggaaaaccttccgccaagccctacatgaagttcaccctatcagttcc ggcctggaagccatggcattgaaatcaaccattgacctgacatgcaacgattacatttcagtgtttgaatttgatatttt tacccgtctgtttcagccctggtcttctttgctccgaaactggaatagccttgcggtgactcatcctggctatatggcat tcctgacctatgatgaggtcaaagcccggcttcagaagttcattcacaaacctggaagttacatttttcgtctgagttgt acccgacttggtcagtgggcgattggctatgtcactgcagatggaaacatcctccagacgattccccacaacaaacctct ttttcaagcactgattgatggcttcagggaaggcttttacttgtatcccgatggaagaaaccagaatcctgacctgaccg gcctgtgtgagcccacaccgcaggaccacattaaagtcacccaggagcaatacgaactgtactgcgagatgggctccacc ttccagctctgtaaaatctgtgccgaaaacgacaaagatgtgaagattgaaccctgcggtcacctcatgtgtacctcttg tctcacgtcatggcaggaatcggaggggcagggatgcccgttctgccggtgtgaaattaaaggcaccgagcctattgtgg tggacccttttgatccccgaggagggggagggcttctgaggcatggggcagaaggagccccttctccaaattatgacgat gacgacgacagaacggatgattcactgttcatgatgaaagagctggctggtgcaaaagtagagcgtcccccttctccatt ttcaatgactccgcaggcggcacttcccccagtacctccacggttggaccttctgcagcagcagcagcgtgtgtccaccc cacctggagcatcaagcccaggaaccacttccaaggctgcacctggttctctccacaaagacaaacctctgccgatccca ccgactcaccgagatcttcctccacccccgcctccagacaggccccacgccgttgggacagagactcggtcccagagacg acccttgccttgcactccaggagactgtccttccagggacaagttgccccccgtgccctgtaaccgtcagggggagctct ggccatcacggccgatgttgaaggcgcccacggaagcctgggccagtcgggaactgaagaaccgccattccctccccttc tcgctgccttctcagatggatgccagagtggagcctcacagactgggcagtactctgagcttggacactccggtgaatca actcggtcttcctgctggtttagacagcgaacattctaaaataaaaccatcttcttctgccaatgccatctattctcttg ctataaggtcattggttgccccaaagctgctctctggagaggcctctgggaatgacgaagactctgagtacatgtcccct tcctccttgcccctggtgccccctggctgtgctggacaaaagcctgatgccaaactgcctttggaaatgaatacaggttc acgcgtattggagtgtgagcaggaaatggagggaacgacttacgaagcaatgttcaatattcaggcccagccagcaccgt gttcctctgaaactgccagcatgcctgacgtaggggacatggtagctgatgaagatgcccccaatggtcctgaggaaccg gggaacgaggaagacggctatgatgttccccgcccatccgcccagccagccaccactcgtcgctcactgtccgatatctc caacgcagccacctccttcagccacgcctctctggatggcgaacttctagcagatgcctcggacgtctcccaggttcccg agaggcccccgaaacctttgcctcggagaataaactctgaacggaaggcgggcagctgcctgcaggccagcggagcagga ccagtccctgcggcctccccgcagctctcctccgagattgagaatctcatgagccaaggttactcatatcaggacatcca gaaagccctgctcatcgcccacaacaacattgacatggccaagaatattctccgggaatttgtctccatttcttccccca cgcacgtggccacatagcacctctttcggccctacctggagccctcctcccatgcattgttaatgttttagaggttatac taatgttatttattttttatttttcattctggtaaggggcccactgaagagcttggtgggaggggtgggagcctttaggg aatttcatgtgtgtcgataaaaagagaaacaaaaggaaaagtt |
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Protein
| Protein ID | habu1_s1961_g07160.t1 |
|---|---|
| Definition | - |
>habu1_s1961_g07160.t1 MAAPLKKGPGGLIGLMKDAFQPHHHHLGPHQPSTVDKKMVEKCWKLMDKVVRLCQNPKLALKNSPPYILDLLPDTYQHLR TVLSCYEGKMETLGENEYFRVFMENLMKKTKQTISLFKEGKERMYEENSQPRRNLTKLSLIFSHMLAELKGIFPNGLFQG DTFRITKADAAEFWRKAFEEKTIVPWKTFRQALHEVHPISSGLEAMALKSTIDLTCNDYISVFEFDIFTRLFQPWSSLLR NWNSLAVTHPGYMAFLTYDEVKARLQKFIHKPGSYIFRLSCTRLGQWAIGYVTADGNILQTIPHNKPLFQALIDGFREGF YLYPDGRNQNPDLTGLCEPTPQDHIKVTQEQYELYCEMGSTFQLCKICAENDKDVKIEPCGHLMCTSCLTSWQESEGQGC PFCRCEIKGTEPIVVDPFDPRGGGGLLRHGAEGAPSPNYDDDDDRTDDSLFMMKELAGAKVERPPSPFSMTPQAALPPVP PRLDLLQQQQRVSTPPGASSPGTTSKAAPGSLHKDKPLPIPPTHRDLPPPPPPDRPHAVGTETRSQRRPLPCTPGDCPSR DKLPPVPCNRQGELWPSRPMLKAPTEAWASRELKNRHSLPFSLPSQMDARVEPHRLGSTLSLDTPVNQLGLPAGLDSEHS KIKPSSSANAIYSLAIRSLVAPKLLSGEASGNDEDSEYMSPSSLPLVPPGCAGQKPDAKLPLEMNTGSRVLECEQEMEGT TYEAMFNIQAQPAPCSSETASMPDVGDMVADEDAPNGPEEPGNEEDGYDVPRPSAQPATTRRSLSDISNAATSFSHASLD GELLADASDVSQVPERPPKPLPRRINSERKAGSCLQASGAGPVPAASPQLSSEIENLMSQGYSYQDIQKALLIAHNNIDM AKNILREFVSISSPTHVAT |
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