Gene
| Gene Model ID | habu1_s1961_g07164 |
|---|---|
| Locus | habu1_scaffold1961 : 1298211 ... 1311905 : - |
| To GenomeBrowser | habu1_scaffold1961:1298211..1311905 |
| Genes list of scaffold | habu1_scaffold1961 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1961_g07164.t2 | 2 | 1 | CUB | 164 | 275 | 0.0 | 195.9 | 6.2e-32 | 2.3e-28 | 98.4 |
| habu1_s1961_g07164.t2 | 2 | 1 | Ldl_recept_a | 284 | 319 | 3.6e-19 | 68.3 | 2.7e-11 | 1.0e-07 | 31.7 |
| habu1_s1961_g07164.t2 | 2 | 2 | CUB | 326 | 436 | 0.0 | 195.9 | 5.9e-31 | 2.2e-27 | 95.3 |
| habu1_s1961_g07164.t2 | 1 | 1 | CUB_2 | 342 | 370 | 9.8e-07 | 28.3 | 9.7e-06 | 0.036 | 13.6 |
| habu1_s1961_g07164.t2 | 2 | 2 | Ldl_recept_a | 444 | 480 | 3.6e-19 | 68.3 | 1.8e-14 | 6.6e-11 | 41.9 |
| habu1_s1961_g07164.t2 | 1 | 1 | Fz | 493 | 603 | 3.0e-19 | 69.4 | 8.0e-23 | 3.0e-19 | 69.4 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.6 |
| Venom grand-1 | 0.7 |
| Pit, infrared sensing | 0.4 |
| Nose | 4.8 |
| Brain-1 | 0.8 |
| Eye | 20.9 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.2 |
| Brain-2 | 5.9 |
| Spleen | 0.0 |
| Lung | 0.1 |
| Liver | 7.3 |
| Kidney | 0.9 |
| Pancreas | 0.1 |
| Small intestine | 0.6 |
| Large intestine | 0.1 |
| Stomach | 0.7 |
| heart | 0.2 |
| ovary | 0.1 |
| cheek muscle | 0.1 |
Transcript
| Transcript ID | habu1_s1961_g07164.t1 |
|---|---|
| Definition | - |
>habu1_s1961_g07164.t1 catgtattccccaacctccttcttggcaatgaaggacttcaccaaggccatctgtcacccggaggcacagaatcaaaacc aggagactgtcgtgttgtctttgccaccgaacttgctgatggagttctccaatcctgtgtttgaggaggagggcgaggcg ccggcccagaaccagctggaggaggagaagagcagtgatgccaaactcaccaccaatggatttgctcagcaagtgcgaga ggcagccagcaagaaattccagccagactgcaaattttcctggctctgtgtgaccgtcctaagccttctgctgctgctcc tcctggccttgcttgtaggcatcctagtcacctaccagctcaagtcccctcctccaagtaagcccactcttgagactttc cttgggcacaacgtcgccaatgccaccttctcggtcaggggagcttctggggaccctgcctccaccacttccccatccca accggagctgcagggaaccacaaaaccaggacgcctgtgtggaggcgaacttggaggccccaagggcaccttcagctctc ccaactatcccgatccatacccacctaacgtcctctgccactggcacatccaagtgaagatggggatggtgattcagctg aaaatagagactctggatgtggaggcctcggacttctgcttctatgatcggctggagatctacgaggaatcagatagtct ctccctttgggatgggagtactaggtactgtggcaaggtagccccagcgactatcaacaccaactctaaccagattaaag ttggttttgtgtccgatgataacattgctccttcggggttcacagccaggtaccgggccatcctccccagtgaaaagaac tgctcctgggatgaattcttgtgtgaccagggactttgcctccttccagtctttgtgtgtgatggtcaccaggactgcaa ggacaatcgagacgaagccaattgtagcgccaagcatacaggttgtggtgggaccttgaccagcctggagggacagttct tctctccaaactatcccaaaccatacccacatctacagatctgtctctggcacatctctgtgcccatgggccatgtgatc cagctgcaattctacaacttcagccttgagtcccacgaagattgcaatttcgactttgtggaggtgtatgacagtgctgc catggggaccagcaacctcatgggtcggttctgcaactccaatatgcctcctgtgttgacttcatcccatcacgtcatga ccgtcctgttcgtggctgatgaggagattggggatgatgggttctttgctatctaccaggcccacaacctgagtgaaaaa acatgtggacctctagaatttgtctgtggaaatggcgagtgtgtggcccaggagttcgtttgtgacagctggaggaactg tccagatggaagtgacgaagtcaactgtaccagcatttcttccacatcagtggaggcctcctgtgaacccatcaagatag aaatgtgccaaggtctcagctacaattccacctccttccccaacatctggctgatgatcccccatcagcagagtgctgag gcgctgcttcaagactacatggtgctgcgggacctcaggtgctaccctcacctgcgcttgctgatctgcagcctcttcgt cccgaagtgcatcccagaagggggcaccttgcagccctgtcgctccgtgtgtctgggggcagaggagcactgccggaagc ccctggcccgcttggacatcctctggcccttgaactgcaacatcctgcctgactccaccaaccctctggagtgcttcttg ccttgagggcccccaccctcccacccacccacccagtgcccagtccagaaggagggagggaggcctgttggaggcagcca ggagacgtcccagtccaggagacctttcgatctgttcatctcgcagcaaaccattatgggtttgctccccaaagtatctc cagggaatcgctcctgaagtcctctgcattgactctccttcttgactccacttctgcctctatcaaatgatagactgaag tggatccaggatctctctgtccgagaatcctagatcatgaagttggaagggatccaacttccactaagtcatctctgaca gataaccctccgacttcccgacagttcacgggccagccttttccattagctgatggctgtgcagtcggacaatctctctc aactcccactgattttgcaggaatatctgtgatgtcttattggcaaaaccgaaaatcttctgggaggtttttcaccttcc cagcctcgcgtgaagtatgatgcccaacgacggactgaccctgcttagctcttttcaagatcggtccacagtagccaggc agcctccctctgaagaggcttccacttcaattatgctttataaactcatttaaaattaataataataataataaagtaat tataacatcatagaagc |
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| Transcript ID | habu1_s1961_g07164.t2 |
| Definition | - |
>habu1_s1961_g07164.t2 catgtattccccaacctccttcttggcaatgaaggacttcaccaaggccatctgtcacccggaggcacagaatcaaaacc aggagactgtcgtgttgtctttgccaccgaacttgctgatggagttctccaatcctgtgtttgaggaggagggcgaggcg ccggcccagaaccagctggaggaggagaagagcagtgatgccaaactcaccaccaatggatttgctcagcaagtgcgaga ggcagccagcaagaaattccagccagactgcaaattttcctggctctgtgtgaccgtcctaagccttctgctgctgctcc tcctggccttgcttgtaggcatcctagtcacctaccagctcaagtcccctcctccaagtaagcccactcttgagactttc cttgggcacaacgtcgccaatgccaccttctcggtcaggggagcttctggggaccctgcctccaccacttccccatccca accggagctgcagggaaccacaaaaccaggacgcctgtgtggaggcgaacttggaggccccaagggcaccttcagctctc ccaactatcccgatccatacccacctaacgtcctctgccactggcacatccaagtgaagatggggatggtgattcagctg aaaatagagactctggatgtggaggcctcggacttctgcttctatgatcggctggagatctacgaggaatcagatagtct ctccctttgggatgggagtactaggtactgtggcaaggtagccccagcgactatcaacaccaactctaaccagattaaag ttggttttgtgtccgatgataacattgctccttcggggttcacagccaggtaccgggccatcctccccagtgaaaagaac tgctcctgggatgaattcttgtgtgaccagggactttgcctccttccagtctttgtgtgtgatggtcaccaggactgcaa ggacaatcgagacgaagccaattgtagcgccaagcatacaggttgtggtgggaccttgaccagcctggagggacagttct tctctccaaactatcccaaaccatacccacatctacagatctgtctctggcacatctctgtgcccatgggccatgtgatc cagctgcaattctacaacttcagccttgagtcccacgaagattgcaatttcgactttgtggaggtgtatgacagtgctgc catggggaccagcaacctcatgggtcggttctgcaactccaatatgcctcctgtgttgacttcatcccatcacgtcatga ccgtcctgttcgtggctgatgaggagattggggatgatgggttctttgctatctaccaggcccacaacctgagtgaaaaa acatgtggacctctagaatttgtctgtggaaatggcgagtgtgtggcccaggagttcgtttgtgacagctggaggaactg tccagatggaagtgacgaagtcaactgtaccagcatttcttccacatcagtggcagaggcctcctgtgaacccatcaaga tagaaatgtgccaaggtctcagctacaattccacctccttccccaacatctggctgatgatcccccatcagcagagtgct gaggcgctgcttcaagactacatggtgctgcgggacctcaggtgctaccctcacctgcgcttgctgatctgcagcctctt cgtcccgaagtgcatcccagaagggggcaccttgcagccctgtcgctccgtgtgtctgggggcagaggagcactgccgga agcccctggcccgcttggacatcctctggcccttgaactgcaacatcctgcctgactccaccaaccctctggagtgcttc ttgccttgagggcccccaccctcccacccacccacccagtgcccagtccagaaggagggagggaggcctgttggaggcag ccaggagacgtcccagtccaggagacctttcgatctgttcatctcgcagcaaaccattatgggtttgctccccaaagtat ctccagggaatcgctcctgaagtcctctgcattgactctccttcttgactccacttctgcctctatcaaatgatagactg aagtggatccaggatctctctgtccgagaatcctagatcatgaagttggaagggatccaacttccactaagtcatctctg acagataaccctccgacttcccgacagttcacgggccagccttttccattagctgatggctgtgcagtcggacaatctct ctcaactcccactgattttgcaggaatatctgtgatgtcttattggcaaaaccgaaaatcttctgggaggtttttcacct tcccagcctcgcgtgaagtatgatgcccaacgacggactgaccctgcttagctcttttcaagatcggtccacagtagcca ggcagcctccctctgaagaggcttccacttcaattatgctttataaactcatttaaaattaataataataataataaagt aattataacatcatagaagc |
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Protein
| Protein ID | habu1_s1961_g07164.t1 |
|---|---|
| Definition | - |
>habu1_s1961_g07164.t1 MKDFTKAICHPEAQNQNQETVVLSLPPNLLMEFSNPVFEEEGEAPAQNQLEEEKSSDAKLTTNGFAQQVREAASKKFQPD CKFSWLCVTVLSLLLLLLLALLVGILVTYQLKSPPPSKPTLETFLGHNVANATFSVRGASGDPASTTSPSQPELQGTTKP GRLCGGELGGPKGTFSSPNYPDPYPPNVLCHWHIQVKMGMVIQLKIETLDVEASDFCFYDRLEIYEESDSLSLWDGSTRY CGKVAPATINTNSNQIKVGFVSDDNIAPSGFTARYRAILPSEKNCSWDEFLCDQGLCLLPVFVCDGHQDCKDNRDEANCS AKHTGCGGTLTSLEGQFFSPNYPKPYPHLQICLWHISVPMGHVIQLQFYNFSLESHEDCNFDFVEVYDSAAMGTSNLMGR FCNSNMPPVLTSSHHVMTVLFVADEEIGDDGFFAIYQAHNLSEKTCGPLEFVCGNGECVAQEFVCDSWRNCPDGSDEVNC TSISSTSVEASCEPIKIEMCQGLSYNSTSFPNIWLMIPHQQSAEALLQDYMVLRDLRCYPHLRLLICSLFVPKCIPEGGT LQPCRSVCLGAEEHCRKPLARLDILWPLNCNILPDSTNPLECFLP |
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| Protein ID | habu1_s1961_g07164.t2 |
| Definition | - |
>habu1_s1961_g07164.t2 MKDFTKAICHPEAQNQNQETVVLSLPPNLLMEFSNPVFEEEGEAPAQNQLEEEKSSDAKLTTNGFAQQVREAASKKFQPD CKFSWLCVTVLSLLLLLLLALLVGILVTYQLKSPPPSKPTLETFLGHNVANATFSVRGASGDPASTTSPSQPELQGTTKP GRLCGGELGGPKGTFSSPNYPDPYPPNVLCHWHIQVKMGMVIQLKIETLDVEASDFCFYDRLEIYEESDSLSLWDGSTRY CGKVAPATINTNSNQIKVGFVSDDNIAPSGFTARYRAILPSEKNCSWDEFLCDQGLCLLPVFVCDGHQDCKDNRDEANCS AKHTGCGGTLTSLEGQFFSPNYPKPYPHLQICLWHISVPMGHVIQLQFYNFSLESHEDCNFDFVEVYDSAAMGTSNLMGR FCNSNMPPVLTSSHHVMTVLFVADEEIGDDGFFAIYQAHNLSEKTCGPLEFVCGNGECVAQEFVCDSWRNCPDGSDEVNC TSISSTSVAEASCEPIKIEMCQGLSYNSTSFPNIWLMIPHQQSAEALLQDYMVLRDLRCYPHLRLLICSLFVPKCIPEGG TLQPCRSVCLGAEEHCRKPLARLDILWPLNCNILPDSTNPLECFLP |
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