Gene
| Gene Model ID | habu1_s1961_g07167 |
|---|---|
| Locus | habu1_scaffold1961 : 1524240 ... 1675545 : - |
| To GenomeBrowser | habu1_scaffold1961:1524240..1675545 |
| Genes list of scaffold | habu1_scaffold1961 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| poliovirus receptor-related protein 1- partial | GO:0002089 GO:0002934 GO:0004872 GO:0005913 GO:0006826 GO:0007156 GO:0007157 GO:0007165 GO:0016337 GO:0042803 GO:0050839 GO:0060041 GO:0070166 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1961_g07167.t3 | 2 | 1 | Ig_2 | 20 | 122 | 1.1e-16 | 60.6 | 2.8e-08 | 3.0e-05 | 24.0 |
| habu1_s1961_g07167.t3 | 1 | 1 | V-set | 21 | 122 | 3.2e-11 | 43.1 | 9.0e-13 | 9.5e-10 | 38.3 |
| habu1_s1961_g07167.t3 | 2 | 1 | ig | 25 | 105 | 1.1e-15 | 57.4 | 6.4e-10 | 6.7e-07 | 29.3 |
| habu1_s1961_g07167.t3 | 1 | 1 | I-set | 25 | 122 | 9.6e-09 | 34.9 | 1.6e-06 | 0.0017 | 18.1 |
| habu1_s1961_g07167.t3 | 1 | 1 | C2-set_2 | 146 | 215 | 1.0e-19 | 70.2 | 2.5e-20 | 2.6e-17 | 62.4 |
| habu1_s1961_g07167.t3 | 2 | 2 | Ig_2 | 243 | 313 | 1.1e-16 | 60.6 | 1.6e-10 | 1.7e-07 | 31.2 |
| habu1_s1961_g07167.t3 | 2 | 2 | ig | 244 | 298 | 1.1e-15 | 57.4 | 1.7e-06 | 0.0018 | 18.3 |
| habu1_s1961_g07167.t3 | 1 | 1 | Ig_3 | 245 | 300 | 2.8e-12 | 46.9 | 4.8e-09 | 5.1e-06 | 26.9 |
| habu1_s1961_g07167.t3 | 1 | 1 | Herpes_gE | 321 | 406 | 3.5e-07 | 28.8 | 6.0e-06 | 0.0064 | 14.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1961_g07167.t3 | gi|542174757|ref|XP_005494648.1| | PREDICTED: poliovirus receptor-related protein 1 [Zonotrichia albicollis] | 0.0 |
| habu1_s1961_g07167.t3 | gi|704506836|ref|XP_010079415.1| | PREDICTED: nectin-1, partial [Pterocles gutturalis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 11.5 |
| Venom grand-1 | 4.1 |
| Pit, infrared sensing | 3.0 |
| Nose | 2.2 |
| Brain-1 | 9.7 |
| Eye | 7.9 |
| fetal fibroblast | 7.4 |
| venom gland-2 | 4.8 |
| Brain-2 | 9.7 |
| Spleen | 1.1 |
| Lung | 0.7 |
| Liver | 0.0 |
| Kidney | 5.2 |
| Pancreas | 1.4 |
| Small intestine | 1.1 |
| Large intestine | 2.2 |
| Stomach | 1.5 |
| heart | 0.3 |
| ovary | 3.1 |
| cheek muscle | 0.9 |
Transcript
| Transcript ID | habu1_s1961_g07167.t1 |
|---|---|
| Definition | - |
>habu1_s1961_g07167.t1 ccacgccgccttgcctgctcagccgccccccctccccgaccagggaaactctccgatggccgggcaagcgcagcagctgg gctggctccggggctggtggactaccggcgtgtgtttggcggcgctggccttcccaggcctctgggctcagaaggtgctt gtcaatgagacggtctctggcttcatcgggactgacgtggtccttcactgcaacttggtcaagatcaatcacacgaggat cacccaggtcacctggcagaaggccagtaatggctccaagcaaaatgtggccatctacaaccccgtcatgggggtctcca tcctgcccccctatgaggagagagtggtcttccagagcccctccatcaccgatgggaccatcaagctgtccaacctccag ttggacgatgaagggatctacatctgtgagtttgccaccttccctactggcaaccgggaaaaccaactcaatctcactgt attggccaaaccagtgaaccggatggagggcacctccagaccattgattgccagggccggcatgacggagaaaatcctgg tggccacctgcatatcctccaatgggaaacctcctagcactgtgacctgggacactaagctgaaaggcgaggcagaattc caggagatccgcaatgagaatggcaccatcactgtgatcagccgctaccgtcttttaccaagccgagaggcccaccagca gcagctgaagtgtgtggtcaactaccagttggagcgttttacgcagagcatgaccctcaacgtgttgtatgaacctgagg ttagaatcgatggttttgacagtaactggtatctcaaccggaaggatgtcaaactgacatgtatatcagacgccaatccc cccgccatggagtaccaatggaagcggctgaatagctcgctgcccgacagtgccgaaattcaaaacagcactctgttctt caaaggaccggtcacatacagcctgtcggcgacgtatatatgtgaagccaccaacaccatcggcacccgatctgggcagg tggaagtgaatgtcacagaattcccctacaccccgtctccaccgggcacatccgtggcacatccgaccgtccccactgcc gtgattgggggcgtggtgggcggagcctcgttggtcgtagtggtggccgtggtcgtccttatggtgctccgccaccggcg ccacactttcaagggcgattacagcaccaagaagcacgtctacggcaacgggtacagcaaggcgggcatcccccagcatc acccacccatggcccagaacctccagtatcctgacgattcagatgacgagaaaaagcccggcccgctgggcagcaacagc tacgaggatgaagatgatgatggcgccggggctgagcggaaacaccggtcctgtcccaacaagtacgaggaggactccaa gcggccttacttcacagtggacgagggcgaagcccactctgaagcctacaacgaacggacacttggattccagtatgacc ccgagcaactggacatagccgataacatggtctctcagaatgacgggtcttttatttccaaaaaagagtgaaatgtagct atatccttctcccattgtttaaatggtacattagttgtcaaaacagataagccgttgccccaggggggtttaggaggcgt tttgggaatcctgggggttgtgattgctgctcttttcattattgctggggctgttacagtcttcatcatctacagaagac agcagaagaatcggtcagacactgaaaatgacctgatagacctcccttcttctcagaaacctgcttctctgcccctcagc cagaatcaagaagtgaaaagccaattgactgcagagaatatccaggttgtgcacctggataacatgaaggaacaagagga agaggtccagaagacatcatcccagcccccctattatgacatggcagctactgagtctactcctaaccctgacaagttga ctgcaggcaacgacaaggattccaacgtccaatacgcagagctggacacttctgttctgacaacatcatcccctagtcac agaacgtccgttcctatgctgtcctcaagaacttcaacaagtgtcacttagagataccagacgcagccacttcttttaga ccacctggggtctaaaagctttcatatgtggactagagaataacacaatctaagcagatgtaaaagacattattaaaaac attaaagacatatgttatc |
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| Transcript ID | habu1_s1961_g07167.t2 |
| Definition | - |
>habu1_s1961_g07167.t2 ccacgccgccttgcctgctcagccgccccccctccccgaccagggaaactctccgatggccgggcaagcgcagcagctgg gctggctccggggctggtggactaccggcgtgtgtttggcggcgctggccttcccaggcctctgggctcagaaggtgctt gtcaatgagacggtctctggcttcatcgggactgacgtggtccttcactgcaacttggtcaagatcaatcacacgaggat cacccaggtcacctggcagaaggccagtaatggctccaagcaaaatgtggccatctacaaccccgtcatgggggtctcca tcctgcccccctatgaggagagagtggtcttccagagcccctccatcaccgatgggaccatcaagctgtccaacctccag ttggacgatgaagggatctacatctgtgagtttgccaccttccctactggcaaccgggaaaaccaactcaatctcactgt attggccaaaccagtgaaccggatggagggcacctccagaccattgattgccagggccggcatgacggagaaaatcctgg tggccacctgcatatcctccaatgggaaacctcctagcactgtgacctgggacactaagctgaaaggcgaggcagaattc caggagatccgcaatgagaatggcaccatcactgtgatcagccgctaccgtcttttaccaagccgagaggcccaccagca gcagctgaagtgtgtggtcaactaccagttggagcgttttacgcagagcatgaccctcaacgtgttgtatgaacctgagg ttagaatcgatggttttgacagtaactggtatctcaaccggaaggatgtcaaactgacatgtatatcagacgccaatccc cccgccatggagtaccaatggaagcggctgaatagctcgctgcccgacagtgccgaaattcaaaacagcactctgttctt caaaggaccggtcacatacagcctgtcggcgacgtatatatgtgaagccaccaacaccatcggcacccgatctgggcagg tggaagtgaatgtcacagaattcccctacaccccgtctccaccgggcacatccgtggcacatccgaccgtccccactgcc gtgattgggggcgtggtgggcggagcctcgttggtcgtagtggtggccgtggtcgtccttatggtgctccgccaccggcg ccacactttcaagggcgattacagcaccaagaagcacgtctacggcaacgggtacagcaaggcgggcatcccccagcatc acccacccatggcccagaacctccagtatcctgacgattcagatgacgagaaaaagcccggcccgctgggcagcaacagc tacgaggatgaagatgatgatggcgccggggctgagcggaaacaccggtcctgtcccaacaagtacgaggaggactccaa gcggccttacttcacagtggacgagggcgaagcccactctgaagcctacaacgaacggacacttggattccagtatgacc ccgagcaactggacatagccgataacatggtctctcagaatgacgggtcttttatttccaaaaaagagtgaaatgtagct atatccttctcccattgtttaaatggtacattagttgtcaaaacagataagccgttgccccaggggggtttaggaggcgt tttgggaatcctgggggttgtgattgctgctcttttcattattgctggggctgttacagtcttcatcatctacagaagac agcagaagaatcggtcagacactgaaaatgacctgatagacctcccttcttctcagaaacctgcttctctgcccctcagc cagaatcaagaagtgaaaagccaattgactgcagagaatatccagactgcaggcaacgacaaggattccaacgtccaata cgcagagctggacacttctgttctgacaacatcatcccctagtcacagaacgtccgttcctatgctgtcctcaagaactt caacaagtgtcacttagagataccagacgcagccacttcttttagaccacctggggtctaaaagctttcatatgtggact agagaataacacaatctaagcagatgtaaaagacattattaaaaacattaaagacatatgttatc |
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| Transcript ID | habu1_s1961_g07167.t3 |
| Definition | - |
>habu1_s1961_g07167.t3 cgctggccaacagttggagacccctgctgtaaaggacccccctttatctcctcattagtatagtgggtttattttttaac attgtgtactgaggcagatcatcctggaatgaaacattaaattccctacatgagggctgctcttcttcttctctgcatag tgatggagatccaaagcatgctgtgagtcagatcaagattcagacaaggttactcatttgctaccatcccaaaataacta tattctgatgttatcaggagcaggtggaggatgtgcaaccacttttcccagggcctctgggctcagaaggtgcttgtcaa tgagacggtctctggcttcatcgggactgacgtggtccttcactgcaacttggtcaagatcaatcacacgaggatcaccc aggtcacctggcagaaggccagtaatggctccaagcaaaatgtggccatctacaaccccgtcatgggggtctccatcctg cccccctatgaggagagagtggtcttccagagcccctccatcaccgatgggaccatcaagctgtccaacctccagttgga cgatgaagggatctacatctgtgagtttgccaccttccctactggcaaccgggaaaaccaactcaatctcactgtattgg ccaaaccagtgaaccggatggagggcacctccagaccattgattgccagggccggcatgacggagaaaatcctggtggcc acctgcatatcctccaatgggaaacctcctagcactgtgacctgggacactaagctgaaaggcgaggcagaattccagga gatccgcaatgagaatggcaccatcactgtgatcagccgctaccgtcttttaccaagccgagaggcccaccagcagcagc tgaagtgtgtggtcaactaccagttggagcgttttacgcagagcatgaccctcaacgtgttgtatgaacctgaggttaga atcgatggttttgacagtaactggtatctcaaccggaaggatgtcaaactgacatgtatatcagacgccaatccccccgc catggagtaccaatggaagcggctgaatagctcgctgcccgacagtgccgaaattcaaaacagcactctgttcttcaaag gaccggtcacatacagcctgtcggcgacgtatatatgtgaagccaccaacaccatcggcacccgatctgggcaggtggaa gtgaatgtcacagaattcccctacaccccgtctccaccgggcacatccgtggcacatccgaccgtccccactgccgtgat tgggggcgtggtgggcggagcctcgttggtcgtagtggtggccgtggtcgtccttatggtgctccgccaccggcgccaca ctttcaagggcgattacagcaccaagaagcacgtctacggcaacgggtacagcaaggcgggcatcccccagcatcaccca cccatggcccagaacctccagtatcctgacgattcagatgacgagaaaaagcccggcccgctgggcagcaacagctacga ggatgaagatgatgatggcgccggggctgagcggaaacaccggtcctgtcccaacaagtacgaggaggactccaagcggc cttacttcacagtggacgagggcgaagcccactctgaagcctacaacgaacggacacttggattccagtatgaccccgag caactggacatagccgataacatggtctctcagaatgacgggtcttttatttccaaaaaagagtgaaatgtagctatatc cttctcccattgtttaaatggtacattagttgtcaaaacagataagccgttgccccaggggggtttaggaggcgttttgg gaatcctgggggttgtgattgctgctcttttcattattgctggggctgttacagtcttcatcatctacagaagacagcag aagaatcggtcagacactgaaaatgacctgatagacctcccttcttctcagaaacctgcttctctgcccctcagccagaa tcaagaagtgaaaagccaattgactgcagagaatatccaggttgtgcacctggataacatgaaggaacaagaggaagagg tccagaagacatcatcccagcccccctattatgacatggcagctactgagtctactcctaaccctgacaagttgactgca ggcaacgacaaggattccaacgtccaatacgcagagctggacacttctgttctgacaacatcatcccctagtcacagaac gtccgttcctatgctgtcctcaagaacttcaacaagtgtcacttagagataccagacgcagccacttcttttagaccacc tggggtctaaaagctttcatatgtggactagagaataacacaatctaagcagatgtaaaagacattattaaaaacattaa agacatatgttatc |
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Protein
| Protein ID | habu1_s1961_g07167.t1 |
|---|---|
| Definition | - |
>habu1_s1961_g07167.t1 MAGQAQQLGWLRGWWTTGVCLAALAFPGLWAQKVLVNETVSGFIGTDVVLHCNLVKINHTRITQVTWQKASNGSKQNVAI YNPVMGVSILPPYEERVVFQSPSITDGTIKLSNLQLDDEGIYICEFATFPTGNRENQLNLTVLAKPVNRMEGTSRPLIAR AGMTEKILVATCISSNGKPPSTVTWDTKLKGEAEFQEIRNENGTITVISRYRLLPSREAHQQQLKCVVNYQLERFTQSMT LNVLYEPEVRIDGFDSNWYLNRKDVKLTCISDANPPAMEYQWKRLNSSLPDSAEIQNSTLFFKGPVTYSLSATYICEATN TIGTRSGQVEVNVTEFPYTPSPPGTSVAHPTVPTAVIGGVVGGASLVVVVAVVVLMVLRHRRHTFKGDYSTKKHVYGNGY SKAGIPQHHPPMAQNLQYPDDSDDEKKPGPLGSNSYEDEDDDGAGAERKHRSCPNKYEEDSKRPYFTVDEGEAHSEAYNE RTLGFQYDPEQLDIADNMVSQNDGSFISKKEXNVAISFSHCLNGTLVVKTDKPLPQGGLGGVLGILGVVIAALFIIAGAV TVFIIYRRQQKNRSDTENDLIDLPSSQKPASLPLSQNQEVKSQLTAENIQVVHLDNMKEQEEEVQKTSSQPPYYDMAATE STPNPDKLTAGNDKDSNVQYAELDTSVLTTSSPSHRTSVPMLSSRTSTSVT |
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| Protein ID | habu1_s1961_g07167.t2 |
| Definition | - |
>habu1_s1961_g07167.t2 MAGQAQQLGWLRGWWTTGVCLAALAFPGLWAQKVLVNETVSGFIGTDVVLHCNLVKINHTRITQVTWQKASNGSKQNVAI YNPVMGVSILPPYEERVVFQSPSITDGTIKLSNLQLDDEGIYICEFATFPTGNRENQLNLTVLAKPVNRMEGTSRPLIAR AGMTEKILVATCISSNGKPPSTVTWDTKLKGEAEFQEIRNENGTITVISRYRLLPSREAHQQQLKCVVNYQLERFTQSMT LNVLYEPEVRIDGFDSNWYLNRKDVKLTCISDANPPAMEYQWKRLNSSLPDSAEIQNSTLFFKGPVTYSLSATYICEATN TIGTRSGQVEVNVTEFPYTPSPPGTSVAHPTVPTAVIGGVVGGASLVVVVAVVVLMVLRHRRHTFKGDYSTKKHVYGNGY SKAGIPQHHPPMAQNLQYPDDSDDEKKPGPLGSNSYEDEDDDGAGAERKHRSCPNKYEEDSKRPYFTVDEGEAHSEAYNE RTLGFQYDPEQLDIADNMVSQNDGSFISKKEXNVAISFSHCLNGTLVVKTDKPLPQGGLGGVLGILGVVIAALFIIAGAV TVFIIYRRQQKNRSDTENDLIDLPSSQKPASLPLSQNQEVKSQLTAENIQTAGNDKDSNVQYAELDTSVLTTSSPSHRTS VPMLSSRTSTSVT |
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| Protein ID | habu1_s1961_g07167.t3 |
| Definition | - |
>habu1_s1961_g07167.t3 MCNHFSQGLWAQKVLVNETVSGFIGTDVVLHCNLVKINHTRITQVTWQKASNGSKQNVAIYNPVMGVSILPPYEERVVFQ SPSITDGTIKLSNLQLDDEGIYICEFATFPTGNRENQLNLTVLAKPVNRMEGTSRPLIARAGMTEKILVATCISSNGKPP STVTWDTKLKGEAEFQEIRNENGTITVISRYRLLPSREAHQQQLKCVVNYQLERFTQSMTLNVLYEPEVRIDGFDSNWYL NRKDVKLTCISDANPPAMEYQWKRLNSSLPDSAEIQNSTLFFKGPVTYSLSATYICEATNTIGTRSGQVEVNVTEFPYTP SPPGTSVAHPTVPTAVIGGVVGGASLVVVVAVVVLMVLRHRRHTFKGDYSTKKHVYGNGYSKAGIPQHHPPMAQNLQYPD DSDDEKKPGPLGSNSYEDEDDDGAGAERKHRSCPNKYEEDSKRPYFTVDEGEAHSEAYNERTLGFQYDPEQLDIADNMVS QNDGSFISKKEXNVAISFSHCLNGTLVVKTDKPLPQGGLGGVLGILGVVIAALFIIAGAVTVFIIYRRQQKNRSDTENDL IDLPSSQKPASLPLSQNQEVKSQLTAENIQVVHLDNMKEQEEEVQKTSSQPPYYDMAATESTPNPDKLTAGNDKDSNVQY AELDTSVLTTSSPSHRTSVPMLSSRTSTSVT |
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