Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s1966_g07219
Locus habu1_scaffold1966 : 218183 ... 256705 : -
To GenomeBrowser habu1_scaffold1966:218183..256705
Genes list of scaffold habu1_scaffold1966

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s1966_g07219.t1 1 1 DUF3554 373 713 0.0 218.0 0.0 0.0 207.3
habu1_s1966_g07219.t1 7 1 HEAT_2 1281 1380 1.4013e-45 153.3 9.6e-07 0.0016 18.6
habu1_s1966_g07219.t1 7 2 HEAT_2 1322 1421 1.4013e-45 153.3 3.6e-07 0.00059 20.0
habu1_s1966_g07219.t1 1 1 CLASP_N 1423 1543 1.3e-18 67.2 1.5e-08 2.5e-05 23.7
habu1_s1966_g07219.t1 7 3 HEAT_2 1479 1558 1.4013e-45 153.3 6.7e-10 1.1e-06 28.8
habu1_s1966_g07219.t1 7 4 HEAT_2 1584 1687 1.4013e-45 153.3 9.0e-06 0.015 15.5
habu1_s1966_g07219.t1 7 5 HEAT_2 1624 1725 1.4013e-45 153.3 5.5e-08 9.0e-05 22.6
habu1_s1966_g07219.t1 4 1 HEAT 1665 1692 0.0 162.6 3.5e-06 0.0058 16.6
habu1_s1966_g07219.t1 4 2 HEAT 1783 1810 0.0 162.6 2.3e-06 0.0037 17.2
habu1_s1966_g07219.t1 4 3 HEAT 1821 1850 0.0 162.6 9.2e-06 0.015 15.3
habu1_s1966_g07219.t1 7 6 HEAT_2 1906 1995 1.4013e-45 153.3 8.3e-07 0.0014 18.8
habu1_s1966_g07219.t1 4 4 HEAT 1946 1972 0.0 162.6 2.3e-06 0.0038 17.1
habu1_s1966_g07219.t1 7 7 HEAT_2 2245 2340 1.4013e-45 153.3 9.8e-08 0.00016 21.8

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s1966_g07219.t1 gi|602657175|ref|XP_007434312.1| PREDICTED: translational activator GCN1 [Python bivittatus] 0.0
habu1_s1966_g07219.t1 gi|327282624|ref|XP_003226042.1| PREDICTED: translational activator GCN1 [Anolis carolinensis] 0.0
habu1_s1966_g07219.t1 gi|530590169|ref|XP_005288757.1| PREDICTED: LOW QUALITY PROTEIN: translational activator GCN1 [Chrysemys picta bellii] 0.0
habu1_s1966_g07219.t1 gi|558189628|ref|XP_006129138.1| PREDICTED: translational activator GCN1 [Pelodiscus sinensis] 0.0
habu1_s1966_g07219.t1 gi|683919147|ref|XP_009090806.1| PREDICTED: translational activator GCN1 [Serinus canaria] 0.0

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 5.3
Venom grand-1 6.5
Pit, infrared sensing 6.0
Nose 5.4
Brain-1 5.3
Eye 6.6
fetal fibroblast 12.3
venom gland-2 14.5
Brain-2 5.3
Spleen 5.8
Lung 5.4
Liver 12.5
Kidney 5.8
Pancreas 6.5
Small intestine 4.8
Large intestine 5.0
Stomach 4.9
heart 6.4
ovary 7.1
cheek muscle 12.3

Transcript
Transcript IDhabu1_s1966_g07219.t1
Definition-
>habu1_s1966_g07219.t1
ggaagtgaagctgaacagtttccggaaggagccggcgcgatggcggccgacacgcaggtttcggaaacactgaagagatt
tgcggtgaaagtgaccacctccagtgtgaaggaacgcagagaaatcctgagtgaacttgggagatgcattactgggaaag
atctgccagaaggtgcagtgaagggtctctgcaaacttttctgccttactctgcatcgatacagagatgccgcatcacac
agagcccttcaaacagctcttcggcagcttgctgaatgccagccggaagtgaccgcaaagaatcttttgcactccctgca
gtcttcaggaatcagcagcaagtctgggggatccagcaagagcagtggatctgcagcttcgctggctctttcgtggacct
gtctgctcgttcgaattgtcttcccgactccagacaagagacatggagaaacatgggagaagctggtggaagttcagtgt
ttccttctgctggagatcctaggtggctcccgcaagcctgtggtggatggggctgtgaagaagttgaacagactctggaa
agagaatcccgggctagtggatcagtatctctccatcattcttcacctggaagccaatcagggatatgcaatcatgctgg
gcctgcttgtgcagttctgcaccaaccagaaagatctcggcaccatcaacaaacacaagggtgccctcctggatttctac
atgaagaccatcctgatgagcaagaccaagcctcataaacacgtcctggacaagtgtgcacctctgctccggtatgtgtc
tcattccgaattcaaggacctcctgttgccagctttgcagaaatctctcttgaggagcccggagaacgccattgaaacaa
tttcttgcttattggcctccgtcaccctcgacctcagtcagtacgccctggacatcgtgaaaggcttagccagccagttg
aaatccaatagtcctcatctgatggacaaggccgtcgttgccctcaagaatttggctctgcagtgcagtgaaccatccac
cgtggagtcctttgggaagcacctcttcgccattttgggaggtgcggaaggaaagctgacggtggtggctcagaaaatca
gcatcctgtcagggattggtagctgcagtcaccatgcagtgtcgggggcgtccaatcaggttctcagtggaagcatggtt
gagcttttcatccgtttccttcagcaggaagtccacgaaggcaccctggtccacgccatttccatgcttgcgctctggtg
cgggcgcttcctcaccgaagtcccccaaacgctggtggaatggttcaagaaagccttcagccttaaggcctgcacttctg
cggtcaggcacgcctacctccagtgtatgctggcttccttcaaaggcaacgtcctccttcagggggcagagctgctgccg
ttactggtccagaccgtggagaaagcaggagctcagagcacccagatccctctggtaacggaaggcgtcgctgcagcttt
gctcatctgtcgactttcggtagccgatgcacagattgttcttgataaaagtgataaagaaaacaaactgaacagcttct
ggcagcttattttggatgagaaaaaacaggtctttacttccgagaagttcctgcagtctgcttcagaggaagtgatgtgt
acagttctgcagctgaccgaacgccttctcttagaccacgaatgtcggctacctggagctaaaatccagcagtattacaa
agccttgactgctgtccttctcagccggtcttggagtgtccggaggctcgctcagcagactgtgaggaaactcctatctt
tgccaagaggattcaagttagcttgtgggctcttagaagagctaaaagcggttctcatctcacacaaggtgctcccccct
gaggccttggtcaccgagtctggagagctgtcggaacagggcaaaacctacatccctccgcgtatcctccaggaagcctt
gtgcgtcatcgcctgtgggccggggatggaaggagaaccggaggagaaagaaaaactggtcttggaaatgctgctggtga
gcagccatccttctttggtagcaggacaacctggcctttggcctgccctcctgatcaagatgaagctggacccggttgac
ttcatcaccaagcatctggaaaaaatctttgaccgcatcatcacccagagcccaatgaatcagtcctctctgaacgcggt
cggcttgctctcggtccttctgcccgcaaaagtcctccctcagctgatcagcaccatttccgcctccctggaaaacccgg
ctttgtgtctcgtcacccaagaagaattcgcaatcatgaaggtgccggaaggggagctctatgacaagtccatcttgcac
agtgcccagcaggatagtctgaaaaaggccaacatgaagagggagaacaaggcctactccttcaaggagcagatcatcga
actggaactgaaggaggagattaagaagaagaaagggatcaaggaagagattcagctcaccagtaaacagaaggagatgt
tgacggcccagctggagaaggaatctcagatgaggaagcaactgaaagagctggacactgaattggaatccacgctgggc
ctttttgatgccgttctgaagaggaaccctcccagcctctcccagtacatccctgccctggtcagctgcttcctacctct
gctcaagtcccccctggctgctccaaggattaaggccccgttcctttctttggtgtcgtgtgtgatgccggatcacttaa
agacctttgggaccgtcgcgagtcacgtgactttgcggatgatgaagcccgaatgtgatttggacgaatcctggtgccag
gaagacttgcccacagctgtgaacagagttattagtttgctgcacaagcacaccgtgcctacccggatagccaagggaga
ggagggtcccgtgccgttatcagccccagcctttgctttggtcttccctctcctgaagatggtgctgctggagacccgca
acgacagtgaagagaaggaagagctgatggtgaaggttttgcagatcatcaccgtccatgctcagctgcgctcagctgac
aacaatggggactggctggtggacgaggttttgggttcggtggcgctgaccgccttgtgcgccagcagcagcggagaaga
cggctgcgcttacgcagaacaggaggaaataaatgtcttgctccaggctcttcagtcgccctgcatgaacgttcgggatg
cagctctgcggggtctgatggagctgcagatggtcttgcccaccccagacagcgatgagacgaacgggatgaaccttctg
cgccgtctctgggtggtgaatttcgacagggaagaagaaatccgcctgctggcagagaggctgtgggcatcgatggcttt
agagttacagtcggacatctgctccatcctcatcaaagatgtcatccaccacgagcaggcggtgcgccaggcgggagcag
aagccctttccaagggggttgaacagtaccgaagccagacgagggatgtcatggccaaactgatggagatttatcaagag
aagctctacagacccccaccagttttggatgctctgggacgggtgatcttggactctccacctgaccaatgggaggccag
atgtggcattgctttggccttgaataaactttctcagcacctggaaagctcccaggtgaagcctcttttccagttctttg
tccccgatgccctcaatgaccgtcaccccgaagtccgaaagtgcatgctggacgctgccctctcagcccttaatactcat
ggcaaggagagcgtcaactccttgctgccagtgtttgaggagttccttaagaatgcccccaacgatgccagctacgacgc
cgtccggcagagcgtcgtcatcctcatggggtcactggccaaacatttggacaaaagtgatccgaaagtaaaaccgatcg
tggccaagctgatagccgcgctctcgacgccatcccaacaggttcaggagtccgtggccagctgcttaccccctcttgtg
ccagccatcaaagacgacgccggcgggatgatccagaaactgctgcaacttctgctggaatccgataagtacgcagagcg
gaaaggagcggcttacgggctggccggcctggtgaaggggctgggaatcctttctctgaagcagcaggaaatgatggcca
agctgaccgacgcaatccaggacaagaagaatttccgccggcgggaaggggctttattcgcctttgagatgctgtgcatc
atgctggggaagctctttgagccctacgtggttcacgtgctgccccacttgctgctctgcttcggggacgggaaccagta
cgtccgggaggctgcagatgattgtgccaaggctgtgatgagcaacttaagtgcccacggggtcaagctggtgttgccct
ctttgttagctgctcttgaggaggattcatggagaaccaaagctggctcagtggagttgctgggagccatggcttactgc
gctcccaagcagctgtcttcttgcttgccaaacatcgtgccgaagctgacggaggtgctgacggattctcacgtgaaggt
ccagaaagccgggcaacaggcgttgaggcagatcggctcggtgatcaggaaccctgagattttggtccagttagtcctcg
acttaacgaccacacttaacacatttctcagcaacagaaattttgggctcctttttggtcccatcgctcccgtcctgttg
gacgccttgaccgatccatcccgaaagacccagaagtgcttgcagactttgctggacaccaaatttgtccacttcatcga
tgctccttccttggctctcatcatgcctattgtccagagggcttttcaggaccgctcgacagacacccggaaaatggccg
cccagatcatcgggaatatgtactccttgacggaccagaaggatctggctccttacctgcctagcgtcactcccggattg
aaaacgtctcttctggaccccgtgcctgaggtgcggaccgtatctgcaaaggcgctgggtgccatggtgaaaggcatggg
cgagtcctgctttgaagacttactgccctggctgatggaaaccttgacctacgagcagagttcggtggatcggtcaggtg
ctgcccaaggtttggctgaggttatggctggtttgggagtagagaagctggagaaactgatgccagacatcgtggctacg
gcgagcaaagtggacatcgccccccacgtccgggatggttacattatgatgttcaactacctgcctataacctttggcga
aaagttcaccccttacgttgggcccattattccttgcatccttaaggccttggcagatgagaacgagtttgtgcgggaca
cggctctccgtgcagggcagaggatcataagcatgtacgcagagactgccatcgcgttgctccttcctcaactggaacaa
ggcctcttcgatgacctttggagaatcaggtatagctcagttcagctgctgggggatcttctcttccacatttcaggagt
ttctgggaaaatgacaactgagacggcctcagaggatgataattttggaacagcccaatctaacaaagcaatcatcaacg
ctctggggattgcggcacggacgctgggggatctcgtccgaaagctgggggagaagatccttccggagatcatccccatt
ttggaagagggtttaagatccgaaaaaagtgacaagcggcagggagtctgcattggcttgagtgaaatcatgaagtccac
cagccgggatgcagtgctgtgtttttccgaatctcttgttcccaccgtcaggaaggctctgtgtgaccctctggaagaag
tgcgagaagcagccgccaaaacatttgaacagctgcactcaacaattggataccaggcccttgaagacatcctccctttc
ctgctaaagcagctggactgtgaagaaacctcagagttcgccctggatggtctaaagcaggttatggcagtgaaaagtcg
agttgtgttgccctacttggtgccaaagctcatttctcctcccgtcaacaccagagtcctggccttcctgtcctctgttg
ctggtgatgctctcacccggcacttgggtgtcattctgcctgccatgatgtcagccctcaaggagaagcttggcacaaac
gatgaacagcaggcaagtttgtttcggcctgaagaggacgaggctgggcagaggattatcattgaggatctcttagacac
aacccgcagcgccgaagtcgggatgcgccaagcggcggcggtcatcctcaacatctactgctccaagaccaaggcggact
acacagcccatctgcgcaacctggtctcgggcctgatccgcctctttaacgacaccaattccgtggttttgaatgaaagc
tgggacgcgctgaacgccatcagcaagaaattagatgctggcagccagctggccctcatagaagacctccacagggatat
tcgtatcgttggcaacgatgccgctggagaacacgtgcctggattctgcattcccaagaagggcgtgacctccatcctgc
ctatgctgcgggagggggtcctgaccggcaactcagaccagaaagaagaggcggccaaagctttgggactggtcattaag
ctgacctccgccgaagctctgaaaccatctgtggtcagcattaccgggcccctgatccggatcctgggagaccgcttcag
ctggaacgtcaaggtggctttgctggaaaccttaagtcttctcttggccaaggtgggcattgctctgaaaccgttcctgc
ctcagcttcaaaccaccttcaccaaagccttgcaagatcccaaccgggtggtccgcttaaaagccgccgacgccctgggg
aagctgattgctattcacgccaaggtggaccccctctttaccgaattgctgaacggcattcgcaccagcgaagactctag
catcaggcaagatgcgactcgcatggcctcagcgggttgcttggctgaaatgtcggacgtctctggcatcgactggatgg
tgaggcacggacgcagcctggccctctcggtggctgtgaacacggcggccagcaggctgtgtgcccccaagtattcgaac
agcgtccacgagatgatcttcagcaacacggtcgctgaccggatccccattgctatcgccggcatccgaggaatgggctt
cctcatgaagcatcacatagaagccaacggagggaacctgcccccgaagctgtccaacctcttcatcaagtgtcttcaga
atccatccagcgacatcaaactgactgcggagaagatgatttggtgggccaacaaagcccctctcccccccttggaccct
cccgtggccaagcccatcctcaaggcgcttctggacaacacgaaagataagaacaccagcgtcagggcttacagtgacca
ggccattgtcaacctcctgaagatgcgagaaggcgaggagatgcttcagtccatctccaagatccttgacgctgccagtt
tggaactgctgaacgagagttgccggcgatccctgaaaaagctcgccaatcaagccgactcggttgaacaaattgacgac
accatcctgacgtgagaagcaagttggccctttgaccccttgctgcttcagcattgcaagtcaaagccgacgatgttttc
attttcgaaaatgctaattgtgagccgattaagaaggaaaaaaatagccttaattattctgctggtttaaacaagagaat
ttggcctgtccctcccccctccttttttttttttttttttgaaattctgttgattggtaatgagttaatggcgaattcac
acatccctctgtgtggaaggagacgtttccacttgagtttaagcgggaaggcatttttgttgttgtcaaaagcaagtttt
gttctgaggtgctgttggcttgagatggctctgaaggctgctgattctgcaaatcagatcatccaaggggccagagaaat
gcagaaagggttaacggttgcggttcgaatggcaatttattaaaaagctttcaatctcttgttggc

Protein
Protein IDhabu1_s1966_g07219.t1
Definition-
>habu1_s1966_g07219.t1
MAADTQVSETLKRFAVKVTTSSVKERREILSELGRCITGKDLPEGAVKGLCKLFCLTLHRYRDAASHRALQTALRQLAEC
QPEVTAKNLLHSLQSSGISSKSGGSSKSSGSAASLALSWTCLLVRIVFPTPDKRHGETWEKLVEVQCFLLLEILGGSRKP
VVDGAVKKLNRLWKENPGLVDQYLSIILHLEANQGYAIMLGLLVQFCTNQKDLGTINKHKGALLDFYMKTILMSKTKPHK
HVLDKCAPLLRYVSHSEFKDLLLPALQKSLLRSPENAIETISCLLASVTLDLSQYALDIVKGLASQLKSNSPHLMDKAVV
ALKNLALQCSEPSTVESFGKHLFAILGGAEGKLTVVAQKISILSGIGSCSHHAVSGASNQVLSGSMVELFIRFLQQEVHE
GTLVHAISMLALWCGRFLTEVPQTLVEWFKKAFSLKACTSAVRHAYLQCMLASFKGNVLLQGAELLPLLVQTVEKAGAQS
TQIPLVTEGVAAALLICRLSVADAQIVLDKSDKENKLNSFWQLILDEKKQVFTSEKFLQSASEEVMCTVLQLTERLLLDH
ECRLPGAKIQQYYKALTAVLLSRSWSVRRLAQQTVRKLLSLPRGFKLACGLLEELKAVLISHKVLPPEALVTESGELSEQ
GKTYIPPRILQEALCVIACGPGMEGEPEEKEKLVLEMLLVSSHPSLVAGQPGLWPALLIKMKLDPVDFITKHLEKIFDRI
ITQSPMNQSSLNAVGLLSVLLPAKVLPQLISTISASLENPALCLVTQEEFAIMKVPEGELYDKSILHSAQQDSLKKANMK
RENKAYSFKEQIIELELKEEIKKKKGIKEEIQLTSKQKEMLTAQLEKESQMRKQLKELDTELESTLGLFDAVLKRNPPSL
SQYIPALVSCFLPLLKSPLAAPRIKAPFLSLVSCVMPDHLKTFGTVASHVTLRMMKPECDLDESWCQEDLPTAVNRVISL
LHKHTVPTRIAKGEEGPVPLSAPAFALVFPLLKMVLLETRNDSEEKEELMVKVLQIITVHAQLRSADNNGDWLVDEVLGS
VALTALCASSSGEDGCAYAEQEEINVLLQALQSPCMNVRDAALRGLMELQMVLPTPDSDETNGMNLLRRLWVVNFDREEE
IRLLAERLWASMALELQSDICSILIKDVIHHEQAVRQAGAEALSKGVEQYRSQTRDVMAKLMEIYQEKLYRPPPVLDALG
RVILDSPPDQWEARCGIALALNKLSQHLESSQVKPLFQFFVPDALNDRHPEVRKCMLDAALSALNTHGKESVNSLLPVFE
EFLKNAPNDASYDAVRQSVVILMGSLAKHLDKSDPKVKPIVAKLIAALSTPSQQVQESVASCLPPLVPAIKDDAGGMIQK
LLQLLLESDKYAERKGAAYGLAGLVKGLGILSLKQQEMMAKLTDAIQDKKNFRRREGALFAFEMLCIMLGKLFEPYVVHV
LPHLLLCFGDGNQYVREAADDCAKAVMSNLSAHGVKLVLPSLLAALEEDSWRTKAGSVELLGAMAYCAPKQLSSCLPNIV
PKLTEVLTDSHVKVQKAGQQALRQIGSVIRNPEILVQLVLDLTTTLNTFLSNRNFGLLFGPIAPVLLDALTDPSRKTQKC
LQTLLDTKFVHFIDAPSLALIMPIVQRAFQDRSTDTRKMAAQIIGNMYSLTDQKDLAPYLPSVTPGLKTSLLDPVPEVRT
VSAKALGAMVKGMGESCFEDLLPWLMETLTYEQSSVDRSGAAQGLAEVMAGLGVEKLEKLMPDIVATASKVDIAPHVRDG
YIMMFNYLPITFGEKFTPYVGPIIPCILKALADENEFVRDTALRAGQRIISMYAETAIALLLPQLEQGLFDDLWRIRYSS
VQLLGDLLFHISGVSGKMTTETASEDDNFGTAQSNKAIINALGIAARTLGDLVRKLGEKILPEIIPILEEGLRSEKSDKR
QGVCIGLSEIMKSTSRDAVLCFSESLVPTVRKALCDPLEEVREAAAKTFEQLHSTIGYQALEDILPFLLKQLDCEETSEF
ALDGLKQVMAVKSRVVLPYLVPKLISPPVNTRVLAFLSSVAGDALTRHLGVILPAMMSALKEKLGTNDEQQASLFRPEED
EAGQRIIIEDLLDTTRSAEVGMRQAAAVILNIYCSKTKADYTAHLRNLVSGLIRLFNDTNSVVLNESWDALNAISKKLDA
GSQLALIEDLHRDIRIVGNDAAGEHVPGFCIPKKGVTSILPMLREGVLTGNSDQKEEAAKALGLVIKLTSAEALKPSVVS
ITGPLIRILGDRFSWNVKVALLETLSLLLAKVGIALKPFLPQLQTTFTKALQDPNRVVRLKAADALGKLIAIHAKVDPLF
TELLNGIRTSEDSSIRQDATRMASAGCLAEMSDVSGIDWMVRHGRSLALSVAVNTAASRLCAPKYSNSVHEMIFSNTVAD
RIPIAIAGIRGMGFLMKHHIEANGGNLPPKLSNLFIKCLQNPSSDIKLTAEKMIWWANKAPLPPLDPPVAKPILKALLDN
TKDKNTSVRAYSDQAIVNLLKMREGEEMLQSISKILDAASLELLNESCRRSLKKLANQADSVEQIDDTILT

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