Gene
| Gene Model ID | habu1_s1966_g07221 |
|---|---|
| Locus | habu1_scaffold1966 : 265999 ... 300235 : - |
| To GenomeBrowser | habu1_scaffold1966:265999..300235 |
| Genes list of scaffold | habu1_scaffold1966 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| paxillin isoform x2 | GO:0005515 GO:0005886 GO:0006468 GO:0007166 GO:0009653 GO:0016043 GO:0031589 GO:0043229 GO:0044767 GO:0070887 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1966_g07221.t2 | 1 | 1 | Paxillin | 75 | 278 | 0.0 | 236.8 | 0.0 | 0.0 | 236.8 |
| habu1_s1966_g07221.t2 | 4 | 1 | LIM | 349 | 403 | 0.0 | 218.6 | 7.0e-22 | 2.6e-18 | 65.8 |
| habu1_s1966_g07221.t2 | 4 | 2 | LIM | 408 | 463 | 0.0 | 218.6 | 3.3e-20 | 1.2e-16 | 60.4 |
| habu1_s1966_g07221.t2 | 4 | 3 | LIM | 467 | 521 | 0.0 | 218.6 | 1.4e-19 | 5.3e-16 | 58.4 |
| habu1_s1966_g07221.t2 | 4 | 4 | LIM | 526 | 581 | 0.0 | 218.6 | 1.2e-17 | 4.4e-14 | 52.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1966_g07221.t2 | gi|602657177|ref|XP_007434313.1| | PREDICTED: paxillin-like, partial [Python bivittatus] | 0.0 |
| habu1_s1966_g07221.t2 | gi|514775947|ref|XP_005026702.1| | PREDICTED: paxillin isoform X2 [Anas platyrhynchos] | 0.0 |
| habu1_s1966_g07221.t2 | gi|700389587|ref|XP_009935061.1| | PREDICTED: paxillin [Opisthocomus hoazin] | 0.0 |
| habu1_s1966_g07221.t2 | gi|733912506|ref|XP_010718778.1| | PREDICTED: paxillin isoform X7 [Meleagris gallopavo] | 0.0 |
| habu1_s1966_g07221.t2 | gi|705660941|ref|XP_010125752.1| | PREDICTED: paxillin [Chlamydotis macqueenii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 9.4 |
| Venom grand-1 | 11.8 |
| Pit, infrared sensing | 8.8 |
| Nose | 6.3 |
| Brain-1 | 2.2 |
| Eye | 4.7 |
| fetal fibroblast | 11.5 |
| venom gland-2 | 12.6 |
| Brain-2 | 3.1 |
| Spleen | 7.7 |
| Lung | 18.9 |
| Liver | 9.9 |
| Kidney | 18.2 |
| Pancreas | 4.2 |
| Small intestine | 14.5 |
| Large intestine | 10.4 |
| Stomach | 6.3 |
| heart | 8.1 |
| ovary | 4.3 |
| cheek muscle | 30.5 |
Transcript
| Transcript ID | habu1_s1966_g07221.t1 |
|---|---|
| Definition | - |
>habu1_s1966_g07221.t1 cagtgctgggattcttctcttccgttaccccagccgggcagccaagccgcaaagaaggagaaatgaaccaggaagccatg tcccagagaaaggaactgcaaagttttccccgaatacctgaactgtcagctgactcgggttcacacaacgcgctaaactc cagagatgccttgctggcggatctggaatccacgacctcccatatctccaaacggccggtgtttctgtcggaggaaacct cgtattcttatccaactggaaaccacacttaccaagaagtgtctctgccaccgccggtgccgcctcctccttccaccgag gccttgaacgggaccgtgagcatctctttagagcaatggcaccccgtccttccgagaaacccccaccagcagccgccatc tcagtctcctgtatatagttccagttcctctgtgtccagagagtgcgccatctctccttcgcgggccagtgacgaggaac acgtctatagtttccccaataaacagaagtctgcggaaccgtctcccaccctgatgagctcctccttaggcaataacctg tcagaactggaccggctcctcttggaattgaacgctgtccaacacaaccccccacctggcagtcccacagatgagacccc gggaagcccctcgcagcctggtgggaccggctctcactacagcctcctggagaacactacctctttgaccgcacagccga tggctctggcgaaggaaaagcccaagtggaacggagggcccggggtggaagaagtgtgccccagcgtggagagccttctg gatgaactggagagctctgtgcccagcccagtaccagctattactgtgaatcagggagagatgaacagtccccagaggtt catctccagccagcaacagacacgcatctctgcctcttcagcaaccagagaactggatgagctcatggcttccctttcag acttcaagaccagttccaccatatctctagcctctgagccttccctgcagccctcttctggaccacctggcccagctcca tctcactcggtccctccgctggcctccaagccacacagggccaaacacgatgggtgtgacctgggctctgaggtccctct tgagttgaaggtccttcacattgatgagaaaagcagcggtgtagcggtggccgcgattccagaaccttcttccaccacgt tgcatcgtcaccctgccagagcttggacgaaacccccccttggtaaagcgtctgctcctctcccaagttcagatgggccc agcaaaaccacccttgagaagacacgcgtctcttcttcggagcccgagtcattatttatttgtgcggatggcgcaggaac gctgagtcaaaaacccaggaaaccagaaggactttggaaggagaacctcaaccgtgaagtcaaggatgacattctttcgg tttcgagcaggcttttgaagatgtcagctccccaagaacaggaagagagggctccctttcatcgcaaagctccttttctc aaggagaatggaatgaggacaatcggttacaccaggcaaagtcattcagaaacatctctgttggccccaagaacgtctgt caagaaggaccaggttgggccacccgacctttttaacgtagaaagatgggagagtttcccaggcaccaaaagtcagccag gctgggctgcgccgcagcaggcctcaaaccagagggccgaaattcgagatccagtgagggcaaacagctgtcctgatgtt gccgagaggggatccagaaagaacagccttccgaatggggtcgcggctactccaaaggctgcaggacatgtctgggaaga ggaactggaccgtatcgctggtcctgcggtccctgtggcggagaggatgtccacttcgagccagatccaatcggtgatca ggaaaaccagagagatctccaacgtgcaccccatgtgccgcgatctctcgccgagacgcaagctgggcccggtcatcttc cataaaagcgtctcccaagaccgcctgattgaggaacttcaagacaggttgggcatcagcaaagtcgaagaggaagattg gcaacgaaggcccgacgactggttgaccgagggggtcgtcatcacctccaggcctcaaaagaaaaagaaggatggtagtc aacaaattgaaaaggtgatcattcctgctatgtcaccccttcctctgagaagaaccgtctctgtcccaccttctcctcca ccgcagcttccaaaagatgcctcccaggccgcttctgtcaaagccactctgggctcttctctctcatctgctcctcctcc tccaccaccaccacctcccctggccttgcccgcatcgccacatatccctcagctgcgctttgtgccatctgctcacccga ttcagcctcccatcccgtgggaaatgctgttggaagaagtttccctcaagcagacaccgattcccacccagcccagagga gaggccccttcctccaaaaccttggtgtcgtttatgtcccaggggaaaggagctggcagctacccatcaactacccctcc caagcctggcagccagttggacagcatgcttggaagcctccagtctgacctgcacaaacttggggtagcaaccgttgcca aaggtgtgtgcggagcctgcaagaagcccattgccgggcaggtggtcacagccatggggaagacctggcaccccgagcac ttcgtttgcacccattgtcaggaggaaattggctcccggaatttctttgagcgtgacagccagccttactgcgagaggga ttaccacaacctcttttcgcctcgctgttactactgcaacggccccatcctggataaagtggtgacggccttggacagaa catggcacccagaacacttcttctgcgcacagtgtggggcgttctttggccctgaaggcttccatgagaaggacggcaaa gcctattgccgcaaagattacttcgacatgttcgctcccaaatgtggcggatgtgcccgggccatcctggaaaactatat ctcggccttgaacaccctgtggcatcctgagtgtttcgtttgccgggaatgcttcaccccgtttatcaacggcagcttct tcgaacatgacggtcaaccctactgcgaagtgcattaccacgaacgccggggctcgctctgctccggatgccaaaagccc atcacaggccgctgcatcaccgcgatggccaagaaatttcacccggaacacttcgtgtgtgccttctgcctcaagcaact caacaagggaaccttcaaagagcagaacgacaagccttactgtcagaactgcttcctgaaactcttctcctaaggctcgg cccgtcgtttgtggcatctcctgccaggaaaccccttgccttgttgcgtatcgtcccgcgttcagcaactcgagcgggtt gatgtaggagatgaggaggaagagggttcgtgtgtgtggatgcgaatgagatgctcacagctgctctgggaagggggggt ggtgttccagagcaagaggcctaagggcaggggtcttcaaacttggcctgtttatgacttgtggacttc |
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| Transcript ID | habu1_s1966_g07221.t2 |
| Definition | - |
>habu1_s1966_g07221.t2 cagtgctgggattcttctcttccgttaccccagccgggcagccaagccgcaaagaaggagaaatgaaccaggaagccatg tcccagagaaaggaactgcaaagttttccccgaatacctgaactgtcagctgactcgggttcacacaacgcgctaaactc cagagatgccttgctggcggatctggaatccacgacctcccatatctccaaacggccggtgtttctgtcggaggaaacct cgtattcttatccaactggaaaccacacttaccaagaagtgtctctgccaccgccggtgccgcctcctccttccaccgag gccttgaacgggaccgtgagcatctctttagagcaatggcaccccgtccttccgagaaacccccaccagcagccgccatc tcagtctcctgtatatagttccagttcctctgtgtccagagagtgcgccatctctccttcgcgggccagtgacgaggaac acgtctatagtttccccaataaacagaagtctgcggaaccgtctcccaccctgatgagctcctccttaggcaataacctg tcagaactggaccggctcctcttggaattgaacgctgtccaacacaaccccccacctggcagtcccacagatgagacccc gggaagcccctcgcagcctggtgggaccggctctcactacagcctcctggagaacactacctctttgaccgcacagccga tggctctggcgaaggaaaagcccaagtggaacggagggcccggggtggaagaagtgtgccccagcgtggagagccttctg gatgaactggagagctctgtgcccagcccagtaccagctattactgtgaatcagggagagatgaacagtccccagaggtt catctccagccagcaacagacacgcatctctgcctcttcagcaaccagagaactggatgagctcatggcttccctttcag acttcaagtttatgtcccaggggaaaggagctggcagctacccatcaactacccctcccaagcctggcagccagttggac agcatgcttggaagcctccagtctgacctgcacaaacttggggtagcaaccgttgccaaaggtgtgtgcggagcctgcaa gaagcccattgccgggcaggtggtcacagccatggggaagacctggcaccccgagcacttcgtttgcacccattgtcagg aggaaattggctcccggaatttctttgagcgtgacagccagccttactgcgagagggattaccacaacctcttttcgcct cgctgttactactgcaacggccccatcctggataaagtggtgacggccttggacagaacatggcacccagaacacttctt ctgcgcacagtgtggggcgttctttggccctgaaggcttccatgagaaggacggcaaagcctattgccgcaaagattact tcgacatgttcgctcccaaatgtggcggatgtgcccgggccatcctggaaaactatatctcggccttgaacaccctgtgg catcctgagtgtttcgtttgccgggaatgcttcaccccgtttatcaacggcagcttcttcgaacatgacggtcaacccta ctgcgaagtgcattaccacgaacgccggggctcgctctgctccggatgccaaaagcccatcacaggccgctgcatcaccg cgatggccaagaaatttcacccggaacacttcgtgtgtgccttctgcctcaagcaactcaacaagggaaccttcaaagag cagaacgacaagccttactgtcagaactgcttcctgaaactcttctcctaaggctcggcccgtcgtttgtggcatctcct gccaggaaaccccttgccttgttgcgtatcgtcccgcgttcagcaactcgagcgggttgatgtaggagatgaggaggaag agggttcgtgtgtgtggatgcgaatgagatgctcacagctgctctgggaagggggggtggtgttccagagcaagaggcct aagggcaggggtcttcaaacttggcctgtttatgacttgtggacttc |
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Protein
| Protein ID | habu1_s1966_g07221.t1 |
|---|---|
| Definition | - |
>habu1_s1966_g07221.t1 MNQEAMSQRKELQSFPRIPELSADSGSHNALNSRDALLADLESTTSHISKRPVFLSEETSYSYPTGNHTYQEVSLPPPVP PPPSTEALNGTVSISLEQWHPVLPRNPHQQPPSQSPVYSSSSSVSRECAISPSRASDEEHVYSFPNKQKSAEPSPTLMSS SLGNNLSELDRLLLELNAVQHNPPPGSPTDETPGSPSQPGGTGSHYSLLENTTSLTAQPMALAKEKPKWNGGPGVEEVCP SVESLLDELESSVPSPVPAITVNQGEMNSPQRFISSQQQTRISASSATRELDELMASLSDFKTSSTISLASEPSLQPSSG PPGPAPSHSVPPLASKPHRAKHDGCDLGSEVPLELKVLHIDEKSSGVAVAAIPEPSSTTLHRHPARAWTKPPLGKASAPL PSSDGPSKTTLEKTRVSSSEPESLFICADGAGTLSQKPRKPEGLWKENLNREVKDDILSVSSRLLKMSAPQEQEERAPFH RKAPFLKENGMRTIGYTRQSHSETSLLAPRTSVKKDQVGPPDLFNVERWESFPGTKSQPGWAAPQQASNQRAEIRDPVRA NSCPDVAERGSRKNSLPNGVAATPKAAGHVWEEELDRIAGPAVPVAERMSTSSQIQSVIRKTREISNVHPMCRDLSPRRK LGPVIFHKSVSQDRLIEELQDRLGISKVEEEDWQRRPDDWLTEGVVITSRPQKKKKDGSQQIEKVIIPAMSPLPLRRTVS VPPSPPPQLPKDASQAASVKATLGSSLSSAPPPPPPPPPLALPASPHIPQLRFVPSAHPIQPPIPWEMLLEEVSLKQTPI PTQPRGEAPSSKTLVSFMSQGKGAGSYPSTTPPKPGSQLDSMLGSLQSDLHKLGVATVAKGVCGACKKPIAGQVVTAMGK TWHPEHFVCTHCQEEIGSRNFFERDSQPYCERDYHNLFSPRCYYCNGPILDKVVTALDRTWHPEHFFCAQCGAFFGPEGF HEKDGKAYCRKDYFDMFAPKCGGCARAILENYISALNTLWHPECFVCRECFTPFINGSFFEHDGQPYCEVHYHERRGSLC SGCQKPITGRCITAMAKKFHPEHFVCAFCLKQLNKGTFKEQNDKPYCQNCFLKLFS |
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| Protein ID | habu1_s1966_g07221.t2 |
| Definition | - |
>habu1_s1966_g07221.t2 MNQEAMSQRKELQSFPRIPELSADSGSHNALNSRDALLADLESTTSHISKRPVFLSEETSYSYPTGNHTYQEVSLPPPVP PPPSTEALNGTVSISLEQWHPVLPRNPHQQPPSQSPVYSSSSSVSRECAISPSRASDEEHVYSFPNKQKSAEPSPTLMSS SLGNNLSELDRLLLELNAVQHNPPPGSPTDETPGSPSQPGGTGSHYSLLENTTSLTAQPMALAKEKPKWNGGPGVEEVCP SVESLLDELESSVPSPVPAITVNQGEMNSPQRFISSQQQTRISASSATRELDELMASLSDFKFMSQGKGAGSYPSTTPPK PGSQLDSMLGSLQSDLHKLGVATVAKGVCGACKKPIAGQVVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDSQPYCERDY HNLFSPRCYYCNGPILDKVVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFDMFAPKCGGCARAILENYIS ALNTLWHPECFVCRECFTPFINGSFFEHDGQPYCEVHYHERRGSLCSGCQKPITGRCITAMAKKFHPEHFVCAFCLKQLN KGTFKEQNDKPYCQNCFLKLFS |
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