Gene
| Gene Model ID | habu1_s1966_g07222 |
|---|---|
| Locus | habu1_scaffold1966 : 300346 ... 313292 : + |
| To GenomeBrowser | habu1_scaffold1966:300346..313292 |
| Genes list of scaffold | habu1_scaffold1966 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ras-related protein rab-35 | GO:0000910 GO:0005525 GO:0005546 GO:0005739 GO:0005905 GO:0007264 GO:0015031 GO:0019003 GO:0019882 GO:0031175 GO:0031253 GO:0036010 GO:0045171 GO:0045334 GO:0048227 GO:0070062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1966_g07222.t1 | 1 | 1 | Ras | 9 | 160 | 0.0 | 188.1 | 0.0 | 0.0 | 187.6 |
| habu1_s1966_g07222.t1 | 1 | 1 | Miro | 10 | 115 | 2.5e-16 | 60.2 | 2.6e-19 | 5.4e-16 | 59.1 |
| habu1_s1966_g07222.t1 | 1 | 1 | Arf | 11 | 157 | 2.7e-15 | 56.0 | 1.5e-18 | 3.2e-15 | 55.8 |
| habu1_s1966_g07222.t1 | 1 | 1 | GTP_EFTU | 37 | 159 | 3.3e-07 | 29.9 | 2.6e-10 | 5.5e-07 | 29.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1966_g07222.t1 | gi|545224434|ref|XP_005612733.1| | PREDICTED: ras-related protein Rab-35 [Equus caballus] | 0.0 |
| habu1_s1966_g07222.t1 | gi|531999757|ref|XP_005344408.1| | PREDICTED: ras-related protein Rab-35 [Microtus ochrogaster] | 0.0 |
| habu1_s1966_g07222.t1 | gi|505832910|ref|XP_004611274.1| | PREDICTED: ras-related protein Rab-35 [Sorex araneus] | 0.0 |
| habu1_s1966_g07222.t1 | gi|471387823|ref|XP_004379172.1| | PREDICTED: ras-related protein Rab-35 [Trichechus manatus latirostris] | 0.0 |
| habu1_s1966_g07222.t1 | gi|348584444|ref|XP_003477982.1| | PREDICTED: ras-related protein Rab-35 [Cavia porcellus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 10.7 |
| Venom grand-1 | 7.4 |
| Pit, infrared sensing | 11.5 |
| Nose | 10.9 |
| Brain-1 | 10.5 |
| Eye | 8.6 |
| fetal fibroblast | 12.9 |
| venom gland-2 | 11.3 |
| Brain-2 | 10.6 |
| Spleen | 9.2 |
| Lung | 8.2 |
| Liver | 6.9 |
| Kidney | 8.5 |
| Pancreas | 4.8 |
| Small intestine | 20.6 |
| Large intestine | 6.9 |
| Stomach | 6.0 |
| heart | 5.4 |
| ovary | 40.2 |
| cheek muscle | 11.3 |
Transcript
| Transcript ID | habu1_s1966_g07222.t1 |
|---|---|
| Definition | - |
>habu1_s1966_g07222.t1 agccactggcggttttttccagccgcccgggcggaggagtgcgcatgcgcctgggaggggaannnnnnnnnntaagagca gatgtgcaaacacctgcccgcttcaggcagtgtcggcaagagcagtttgctgctgcgttttgcagacaacactttctcag gcagttacattaccacaattggggtcgacttcaaaattcggaccgttgaaatcaatggggaaaaagtcaagttacagatc tgggacactgcgggacaggagcgcttccggacgatcacctcaacgtactaccgaggcacccacggggtcattgtggttta cgatgtcacaagcgcggagtctttcgtgaatgtcaagcggtggttgcatgaaataaaccagaactgcgacgatgtgtgcc ggatattagttggcaataagaacgatgatccagaacggaaagtggtggagacggaagacgcctataaatttgctgggcag atgggcatccagctgtttgagaccagtgccaaggagaacattaatgtggaagagatgttcaactgcatcacggagttggt tcttcgggctaagaaggacaacctcgcaaaacagcagcagcagcaacagaacgacgtggtgaaactcacaaagaacagta aacggaagaagcggtgctgctaatggccttcctcctcctcctcctcctcctccacctccgggggcggcagagactgggcg ctcgggcagccccgccctcgcagcctgacgcaggcgatgccccaggactcttcccaccccctccctgcgtgccgttattt aaaggagttccctccgtcttctcgatcaggaggcaccttaccgtgtccgtgccaagaacaggatgggacggagctggttc cgcccgactcttcccatcctaaggtttatttttgttcccgcccctcttgaagagcatctggtagacagccctgactttgc ctaccaaggggacttgagcgtttgtacataatgtatattggctttaaccagctgcatctccttgtgtcgcttcgggcttc tgccttctctgactccaccaatcatgaattgttcagaactcttttttttattcgtttgtttacttgctctcttttttccc cccctctccagaaacacaatccaatgaccttaaaacaggcagccctcattggcggccattcttcttcagccttcgttagc ctttaagcagaagtggatccttggtgatcatctggagaacctttcgaaatcctttttttcccccaaactctggaataatt gatgttcccagagttgttttgttctctgtccttcggtcccctccttcaagagaaggaaagatcccacttttataacccaa aggcattcaaaccaccgcggcagagaaaaattaggattaaaacttgtattgactatctccagg |
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Protein
| Protein ID | habu1_s1966_g07222.t1 |
|---|---|
| Definition | - |
>habu1_s1966_g07222.t1 MCKHLPASGSVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVY DVTSAESFVNVKRWLHEINQNCDDVCRILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENINVEEMFNCITELV LRAKKDNLAKQQQQQQNDVVKLTKNSKRKKRCC |
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