Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s1966_g07223
Locus habu1_scaffold1966 : 318364 ... 344385 : -
To GenomeBrowser habu1_scaffold1966:318364..344385
Genes list of scaffold habu1_scaffold1966

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 4.3
Venom grand-1 0.4
Pit, infrared sensing 0.6
Nose 2.0
Brain-1 3.5
Eye 9.1
fetal fibroblast 0.3
venom gland-2 1.5
Brain-2 3.6
Spleen 0.9
Lung 0.5
Liver 0.5
Kidney 0.8
Pancreas 0.5
Small intestine 0.1
Large intestine 0.1
Stomach 0.1
heart 0.2
ovary 10.6
cheek muscle 0.7

Transcript
Transcript IDhabu1_s1966_g07223.t1
Definition-
>habu1_s1966_g07223.t1
aacgagtgaagattcgagagccctgagggagttaatggaaggcgagcgggggaaactgaggcagagtctggaagagctac
agcaacttcacagccaggtgactctgttgagcgttgaaatgacgtcgctgaaagaggaaagagaccgactccggggatca
gtagaagataaggagatgagtgagcagctcttgaaggctatcagagaccgagatgaagcaatctctaagaagaacgctgt
cgagatggagctggccaaatgcagaatggatatgatgtccttgaacagccagctgttggatgccattcaacagaagctta
acctttcgcagcagctggaagcctggcaggatgacatgcagaggctcatcgaccagcagctgatggacagacatcctaag
gaatggagccagataatgatgtgcaacttcaccagcagcagcagccacggagccaagcgtagtcctcgacttacatccat
tcgtttaatggccattcaaagttacaacggcactgaatacttacgaccctggcagcatcgccagggtcacatgatcgaaa
ttcgggcgctcggcaactggcacgtacttatgacggttgcgctataccccggggtcacgtgatcaccatggaccatgatg
acttccaccatccccagccaacctgggttagtaaagactggcctggatgtaatctggtgctttctgagctcctgaaccaa
gaagggtatcagcgctgttggacaggtgtaggcaatagaatcccaacatatatggccaataaaacataagtcatccctgt
atgct
Transcript IDhabu1_s1966_g07223.t2
Definition-
>habu1_s1966_g07223.t2
aagagacgggcgggccggctgctcttcttccggcggcggcggcggcctccccgtcggtgggcggcgagctggagctggcg
ctggaggaggagctggccctgctggcctcggccggggaagggcccggggaggccgaggcgcagggcccggcggcgtcgcc
gccagccgagccggagctgctgtcgctgatgaggcagaaggagaaggacctggtgctggccgcccggctgggcaaagcct
tgctggagcgcaaccaggacctgagccgccagtacgagcgcatgtacaaggagctgaccgagaagctggagcacctggag
caagagaaacatgagctgcggcgacgctttgagaacaaggaaggcgagtgggaaggccgcgtctcggagctggagagcga
cgtcaagcagctgcaggacgagctggagaagcagcaggtccacctccgggaagctgaccgggagaagacgcgggcggtcc
aggaactatcggaacagaaccaaagactcttggatcagctcagcaaggcatcagaagcggagcgaaagctctccacacaa
gttcatgtcctccaagaggacttcagggagaagaggtcatccaccaaccagcacatagtacggcttgagagccttcaagc
agagttgcaccagagccaaatggagcttcaagaggtgagactatcgtatcggcagctgcaggtcaagatggaggagctga
acgaggaacgaagcctccaagatttcaactccaccaggatgtctttgctgtcagagatcgaacagagcatggaagcagag
gagctggaacaagagcgagaacagttgaggctgcagctttgggaggcctattgccaagtccgctacttgtgcacccacct
ccgagggaacgacagtgcggattctgccgtctccaccgactcttccatggacgagtcttccgaaacctcgtcagccaaag
acgtgccggccggcagcctgcgggctgcactcagcgaactgaagaggctgatccaaagcgtgattgacggcacggattgc
ccggggtctcggcgaagtgacgacgatgctctggaagaacagatcaagcaaacgagtgaagattcgagagccctgaggga
gttaatggaaggcgagcgggggaaactgaggcagagtctggaagagctacagcaacttcacagccaggtgactctgttga
gcgttgaaatgacgtcgctgaaagaggaaagagaccgactccggggatcagtagaagataaggagatgagtgagcagctc
ttgaaggctatcagagaccgagatgaagcaatctctaagaagaacgctgtcgagatggagctggccaaatgcagaatgga
tatgatgtccttgaacagccagctgttggatgccattcaacagaagcttaacctttcgcagcagctggaagcctggcagg
atgacatgcagaggctcatcgaccagcagctgatggacagacatcctaaggaatggagccagataatgatgtgcaacttc
accagcagcagcagccacggagccaagcgtagtcctcgacttacatccattcgtttaatggccattcaaagttacaacgg
cactgaatacttacgaccctggcagcatcgccagggtcacatgatcgaaattcgggcgctcggcaactggcacgtactta
tgacggttgcgctataccccggggtcacgtgatcaccatggaccatgatgacttccaccatccccagccaacctgggtta
gtaaagactggcctggatgtaatctggtgctttctgagctcctgaaccaagaagggtatcagcgctgttggacaggtgta
ggcaatagaatcccaacatatatggccaataaaacataagtcatccctgtatgct
Transcript IDhabu1_s1966_g07223.t3
Definition-
>habu1_s1966_g07223.t3
aagagacgggcgggccggctgctcttcttccggcggcggcggcggcctccccgtcggtgggcggcgagctggagctggcg
ctggaggaggagctggccctgctggcctcggccggggaagggcccggggaggccgaggcgcagggcccggcggcgtcgcc
gccagccgagccggagctgctgtcgctgatgaggcagaaggagaaggacctggtgctggccgcccggctgggcaaagcct
tgctggagcgcaaccaggacctgagccgccagtacgagcgcatgtacaaggagctgaccgagaagctggagcacctggag
caagagaaacatgagctgcggcgacgctttgagaacaaggaaggcgagtgggaaggccgcgtctcggagctggagagcga
cgtcaagcagctgcaggacgagctggagaagcagcaggtccacctccgggaagctgaccgggagaagacgcgggcggtcc
aggaactatcggaacagaaccaaagactcttggatcagctcagcaaggcatcagaagcggagcgaaagctctccacacaa
gttcatgtcctccaagaggacttcagggagaagaggtcatccaccaaccagcacatagtacggcttgagagccttcaagc
agagttgcaccagagccaaatggagcttcaagaggtgagactatcgtatcggcagctgcaggtcaagatggaggagctga
acgaggaacgaagcctccaagatttcaactccaccaggatgtctttgctgtcagagatcgaacagagcatggaagcagag
gagctggaacaagagcgagaacagttgaggctgcagctttgggaggcctattgccaagtccgctacttgtgcacccacct
ccgagggaacgacagtgcggattctgccgtctccaccgactcttccatggacgagtcttccgaaacctcgtcagccaaag
acgtgccggccggcagcctgcgggctgcactcagcgaactgaagaggctgatccaaagcgtgattgacggcacggattgc
ccggggtctcggcgaagtgacgacgatgctctggaagaacagatcaagcaaacgagtgaagattcgagagccctgaggga
gttaatggaaggcgagcgggggaaactgaggcagagtctggaagagctacagcaacttcacagccaggtgactctgttga
gcgttgaaatgacgtcgctgaaagaggaaagagaccgactccggggatcagtagaagataaggagatgagtgagcagctc
ttgaaggctatcagagaccgagatgaagcaatctctaagaagaacgctgtcgagatggagctggccaaatgcagaatgga
tatgatgtccttgaacagccagctgttggatgccattcaacagaagcttaacctttcgcagcagctggaagcctggcagg
atgacatgcagaggctcatcgaccagcagctgatggacagacatcctaaggaatggagccagataatgatgtgcaacttc
accagcagcagcagccacggagccaagcgtagtcctcgacttacatccattcgtttaatggccattcaaagttacaacgg
cactgaatacttacgaccctggcagcatcgccagggtcacatgatcgaaattcgggcgctcggcaactggcacgtactta
tgacggttgcgctataccccggggtcacgtgatcaccatgg

Protein
Protein IDhabu1_s1966_g07223.t1
Definition-
>habu1_s1966_g07223.t1
MEGERGKLRQSLEELQQLHSQVTLLSVEMTSLKEERDRLRGSVEDKEMSEQLLKAIRDRDEAISKKNAVEMELAKCRMDM
MSLNSQLLDAIQQKLNLSQQLEAWQDDMQRLIDQQLMDRHPKEWSQIMMCNFTSSSSHGAKRSPRLTSIRLMAIQSYNGT
EYLRPWQHRQGHMIEIRALGNWHVLMTVALYPGVT
Protein IDhabu1_s1966_g07223.t2
Definition-
>habu1_s1966_g07223.t2
MRQKEKDLVLAARLGKALLERNQDLSRQYERMYKELTEKLEHLEQEKHELRRRFENKEGEWEGRVSELESDVKQLQDELE
KQQVHLREADREKTRAVQELSEQNQRLLDQLSKASEAERKLSTQVHVLQEDFREKRSSTNQHIVRLESLQAELHQSQMEL
QEVRLSYRQLQVKMEELNEERSLQDFNSTRMSLLSEIEQSMEAEELEQEREQLRLQLWEAYCQVRYLCTHLRGNDSADSA
VSTDSSMDESSETSSAKDVPAGSLRAALSELKRLIQSVIDGTDCPGSRRSDDDALEEQIKQTSEDSRALRELMEGERGKL
RQSLEELQQLHSQVTLLSVEMTSLKEERDRLRGSVEDKEMSEQLLKAIRDRDEAISKKNAVEMELAKCRMDMMSLNSQLL
DAIQQKLNLSQQLEAWQDDMQRLIDQQLMDRHPKEWSQIMMCNFTSSSSHGAKRSPRLTSIRLMAIQSYNGTEYLRPWQH
RQGHMIEIRALGNWHVLMTVALYPGVT
Protein IDhabu1_s1966_g07223.t3
Definition-
>habu1_s1966_g07223.t3
MRQKEKDLVLAARLGKALLERNQDLSRQYERMYKELTEKLEHLEQEKHELRRRFENKEGEWEGRVSELESDVKQLQDELE
KQQVHLREADREKTRAVQELSEQNQRLLDQLSKASEAERKLSTQVHVLQEDFREKRSSTNQHIVRLESLQAELHQSQMEL
QEVRLSYRQLQVKMEELNEERSLQDFNSTRMSLLSEIEQSMEAEELEQEREQLRLQLWEAYCQVRYLCTHLRGNDSADSA
VSTDSSMDESSETSSAKDVPAGSLRAALSELKRLIQSVIDGTDCPGSRRSDDDALEEQIKQTSEDSRALRELMEGERGKL
RQSLEELQQLHSQVTLLSVEMTSLKEERDRLRGSVEDKEMSEQLLKAIRDRDEAISKKNAVEMELAKCRMDMMSLNSQLL
DAIQQKLNLSQQLEAWQDDMQRLIDQQLMDRHPKEWSQIMMCNFTSSSSHGAKRSPRLTSIRLMAIQSYNGTEYLRPWQH
RQGHMIEIRALGNWHVLMTVALYPGVT

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Okinawa Institute of Science and Technology
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