Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s1966_g07224
Locus habu1_scaffold1966 : 349218 ... 350225 : -
To GenomeBrowser habu1_scaffold1966:349218..350225
Genes list of scaffold habu1_scaffold1966

Annotation by Blast2GO
Annotation GO
a-kinase anchor protein 4-like GO:0016301 GO:0016310

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s1966_g07224.t1 gi|602653735|ref|XP_007432720.1| PREDICTED: A-kinase anchor protein 4-like [Python bivittatus] 5.0e-36
habu1_s1966_g07224.t1 gi|564254382|ref|XP_006266180.1| PREDICTED: A-kinase anchor protein 4-like [Alligator mississippiensis] 1.0e-33

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 0.3
Venom grand-1 0.0
Pit, infrared sensing 0.1
Nose 0.1
Brain-1 0.5
Eye 0.9
fetal fibroblast 0.1
venom gland-2 0.2
Brain-2 0.3
Spleen 0.1
Lung 0.0
Liver 0.0
Kidney 0.0
Pancreas 0.5
Small intestine 0.0
Large intestine 0.0
Stomach 0.0
heart 0.1
ovary 0.6
cheek muscle 0.0

Transcript
Transcript IDhabu1_s1966_g07224.t1
Definition-
>habu1_s1966_g07224.t1
gcggcagtaaatcatcatcatcatcatcatcataaaaattattaaccagttttggtcaatataggatgcaaggcaatata
caacgctagaaaaagggctaattatataatatatatagacttgaagcatatatatatatattggacttgaagcatttatg
gcaacgcaaagactccaagctaatggcgcatttaactctgcccccccaactctgcctgctcttctcctacagctgggctg
tcacctctgttgtttcacatgctttgtgatgtcacaacagctggacagctacctggcctggccagtgtccctgggcagca
gaagagcatgggaaggtaaagaggctagccccttgtctttcagtctcgcagaatcatgtccaaccttcaacccaaagagt
gccccaacgccgaaggcatggtcccggtgaccatgatgaggtcggacatcgattggctgcattgccgcgccggcctctgc
aaagtcagcctgtttgacgacaaagtcccgaccgacaagcagcggaagctggtctgttttgtcgacgtctccagcctgag
cgccaagaaccaagaccaggatgccttgtccacttgcagtgagttcaacggcatggaggccctggaaggaatcgacctgg
gggagagggagatcgtggtcatcagagacgagaagaagggcttgtccaacaccgaaggggccgtgtgtttcttcaagcaa
agctcctgcgagaaagggaacgtgagcggttggctcaacagggaccttgagaagtacgccattggattccagcatgctct
cagcccttcgaaaggacccaggaaaaacctgccttgtgaggcggcggcagcagagaggacggttcagaacggaccggctc
cttttggctgttctggtgcataagactcgggagtcgttctgtccgtgagaagctgcatctttggaccttcaaatgacatg
caaagagatcaaagatcatcaataaattctttttgtaaatgaatgctg

Protein
Protein IDhabu1_s1966_g07224.t1
Definition-
>habu1_s1966_g07224.t1
MSNLQPKECPNAEGMVPVTMMRSDIDWLHCRAGLCKVSLFDDKVPTDKQRKLVCFVDVSSLSAKNQDQDALSTCSEFNGM
EALEGIDLGEREIVVIRDEKKGLSNTEGAVCFFKQSSCEKGNVSGWLNRDLEKYAIGFQHALSPSKGPRKNLPCEAAAAE
RTVQNGPAPFGCSGA

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