Gene
| Gene Model ID | habu1_s1966_g07226 |
|---|---|
| Locus | habu1_scaffold1966 : 423716 ... 429185 : - |
| To GenomeBrowser | habu1_scaffold1966:423716..429185 |
| Genes list of scaffold | habu1_scaffold1966 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| 5 -amp-activated protein kinase subunit beta-1 | GO:0004679 GO:0005634 GO:0005829 GO:0006633 GO:0007005 GO:0007050 GO:0008286 GO:0009069 GO:0010628 GO:0019901 GO:0031588 GO:0045859 GO:0051291 GO:0061024 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1966_g07226.t3 | 1 | 1 | AMPKBI | 192 | 271 | 1.5e-29 | 101.8 | 4.6e-33 | 2.3e-29 | 101.2 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 16.4 |
| Venom grand-1 | 22.8 |
| Pit, infrared sensing | 16.8 |
| Nose | 13.1 |
| Brain-1 | 8.0 |
| Eye | 13.8 |
| fetal fibroblast | 47.8 |
| venom gland-2 | 41.2 |
| Brain-2 | 10.3 |
| Spleen | 16.0 |
| Lung | 18.7 |
| Liver | 27.8 |
| Kidney | 18.6 |
| Pancreas | 21.7 |
| Small intestine | 30.8 |
| Large intestine | 19.1 |
| Stomach | 18.5 |
| heart | 24.9 |
| ovary | 51.8 |
| cheek muscle | 35.8 |
Transcript
| Transcript ID | habu1_s1966_g07226.t1 |
|---|---|
| Definition | - |
>habu1_s1966_g07226.t1 cctcttacaggaaccggaaggagagacctacctaagggggcggggccggaagcgacgggccggaagcgaaggaaccgggt agttttgccatctacgctggcggctgttgctgctctttagccggggcgggaaggaggagaccggcgtgagccgcgggggc ctctccgggctttgaatgtggccgggtggcgctcacaatcggcggctctcccgacgcgagggcgactagctggtgatcaa aataaagattatccatctgccagccaccatccctgacccttgaagagccatggggaacaccagcagcgaacggtctggcg tagagcgccacggaggccataagtcagctcgaagggacagccctgggggatcaaaggatggagacaggcccaagattttg atggacagtcccgaagatgctgacctgttcaatgcagaagaaatgaaagctccgatggagaaagacgaattcctggcttg gcaacacgacctggaagtgagcgacaaagcccccacacaagctcagccgactgtcttccggtggaccggcggaggcaaag aagtttatttatcgggctcctttaacaactggagcaaactcccgcttacgcggagccacaataatttcgtagcaatcctc gatcttccagaaggagaacaccagtacaagtttttcgtggatggccagtggactcacgatccttcagaggctgtggtgac cagccaactagggacggtcaacaatatcatccaagtgaagaagacagactttgaagttttcgatgctttaatggtcgatt cccaaaagtgctccgacgtgtcagaattgtcaagctcgccccctggaccgtatcaccaggacccatacattgttaagccg gaagagagattcaagtcgccccctatccttcctccccacctgctgcaagtcatcctgaacaaagacacggggatttcctg cgatccagctctccttccggaaccgaatcacgtcatgttgaaccatctctatgcgctgtccatcaaggacggagtgatgg tgctgagcgccacccaccgttacaagaagaaatacgtgactaccttgctctacaagcccatatgaacgagacggagggaa agcggaccggtgcgagagaaggaattgccatccagaggatcccctacgcccccaaactcnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnaaattaaattaaattcttcaacgctttcta |
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| Transcript ID | habu1_s1966_g07226.t2 |
| Definition | - |
>habu1_s1966_g07226.t2 cctcttacaggaaccggaaggagagacctacctaagggggcggggccggaagcgacgggccggaagcgaaggaaccgggt agttttgccatctacgctggcggctgttgctgctctttagccggggcgggaaggaggagaccggcgtgagccgcgggggc ctctccgggctttgaatgtggccgggtggcgctcacaatcggcggctctcccgacgcgagatatttgccaaattgggaat ccagggcagggtccccccaaagaagctaatactgactcctaaggattgatgaggcgactagctggtgatcaaaataaaga ttatccatctgccagccaccatccctgacccttgaagagccatggggaacaccagcagcgaacggtctggcgtagagcgc cacggaggccataagtcagctcgaagggacagccctgggggatcaaaggatggagacaggcccaagattttgatggacag tcccgaagatgctgacctgttcaatgcagaagaaatgaaagctccgatggagaaagacgaattcctggcttggcaacacg acctggaagtgagcgacaaagcccccacacaagctcagccgactgtcttccggtggaccggcggaggcaaagaagtttat ttatcgggctcctttaacaactggagcaaactcccgcttacgcggagccacaataatttcgtagcaatcctcgatcttcc agaaggagaacaccagtacaagtttttcgtggatggccagtggactcacgatccttcagaggctgtggtgaccagccaac tagggacggtcaacaatatcatccaagtgaagaagacagactttgaagttttcgatgctttaatggtcgattcccaaaag tgctccgacgtgtcagaattgtcaagctcgccccctggaccgtatcaccaggacccatacattgttaagccggaagagag attcaagtcgccccctatccttcctccccacctgctgcaagtcatcctgaacaaagacacggggatttcctgcgatccag ctctccttccggaaccgaatcacgtcatgttgaaccatctctatgcgctgtccatcaaggacggagtgatggtgctgagc gccacccaccgttacaagaagaaatacgtgactaccttgctctacaagcccatatgaacgagacggagggaaagcggacc ggtgcgagagaaggaattgccatccagaggatcccctacgcccccaaactcnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnaaattaaattaaattcttcaacgctttcta |
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| Transcript ID | habu1_s1966_g07226.t3 |
| Definition | - |
>habu1_s1966_g07226.t3 agttttgccatctacgctggcggctgttgctgctctttagccggggcgggaaggaggagaccggcgtgagccgcgggggc ctctccgggctttgaatgtggccgggtggcgctcacaatcggcggctctcccgacgcgagatatttgccaaattgggaat ccagggcagggtccccccaaagaagctaatactgactcctaaggattgatgaggcgactagctggtgatcaaaataaaga ttatccatctgccagccaccatccctgacccttgaagagccatggggaacaccagcagcgaacggtctggcgtagagcgc cacggaggccataagtcagctcgaagggacagccctgggggatcaaaggatggagacaggcccaagattttgatggacag tcccgaagatgctgacctgttcaatgcagaagaaatgaaagctccgatggagaaagacgaattcctggcttggcaacacg acctggaagtgagcgacaaagcccccacacaagctcagccgactgtcttccggtggaccggcggaggcaaagaagtttat ttatcgggctcctttaacaactggagcaaactcccgcttacgcggagccacaataatttcgtagcaatcctcgatcttcc agaaggagaacaccagtacaagtttttcgtggatggccagtggactcacgatccttcagaggctgtggtgaccagccaac tagggacggtcaacaatatcatccaagtgaagaagacagactttgaagttttcgatgctttaatggtcgattcccaaaag tgctccgacgtgtcagaattgtcaagctcgccccctggaccgtatcaccaggacccatacattgttaagccggaagagag attcaagtcgccccctatccttcctccccacctgctgcaagtcatcctgaacaaagacacggggatttcctgcgatccag ctctccttccggaaccgaatcacgtcatgttgaaccatctctatgcgctgtccatcaaggacggagtgatggtgctgagc gccacccaccgttacaagaagaaatacgtgactaccttgctctacaagcccatatgaacgagacggagggaaagcggacc ggtgcgagagaaggaattgccatccagaggatcccctacgcccccaaactcnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnaaattaaattaaattcttcaacgctttcta |
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Protein
| Protein ID | habu1_s1966_g07226.t1 |
|---|---|
| Definition | - |
>habu1_s1966_g07226.t1 MGNTSSERSGVERHGGHKSARRDSPGGSKDGDRPKILMDSPEDADLFNAEEMKAPMEKDEFLAWQHDLEVSDKAPTQAQP TVFRWTGGGKEVYLSGSFNNWSKLPLTRSHNNFVAILDLPEGEHQYKFFVDGQWTHDPSEAVVTSQLGTVNNIIQVKKTD FEVFDALMVDSQKCSDVSELSSSPPGPYHQDPYIVKPEERFKSPPILPPHLLQVILNKDTGISCDPALLPEPNHVMLNHL YALSIKDGVMVLSATHRYKKKYVTTLLYKPI |
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| Protein ID | habu1_s1966_g07226.t2 |
| Definition | - |
>habu1_s1966_g07226.t2 MGNTSSERSGVERHGGHKSARRDSPGGSKDGDRPKILMDSPEDADLFNAEEMKAPMEKDEFLAWQHDLEVSDKAPTQAQP TVFRWTGGGKEVYLSGSFNNWSKLPLTRSHNNFVAILDLPEGEHQYKFFVDGQWTHDPSEAVVTSQLGTVNNIIQVKKTD FEVFDALMVDSQKCSDVSELSSSPPGPYHQDPYIVKPEERFKSPPILPPHLLQVILNKDTGISCDPALLPEPNHVMLNHL YALSIKDGVMVLSATHRYKKKYVTTLLYKPI |
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| Protein ID | habu1_s1966_g07226.t3 |
| Definition | - |
>habu1_s1966_g07226.t3 MGNTSSERSGVERHGGHKSARRDSPGGSKDGDRPKILMDSPEDADLFNAEEMKAPMEKDEFLAWQHDLEVSDKAPTQAQP TVFRWTGGGKEVYLSGSFNNWSKLPLTRSHNNFVAILDLPEGEHQYKFFVDGQWTHDPSEAVVTSQLGTVNNIIQVKKTD FEVFDALMVDSQKCSDVSELSSSPPGPYHQDPYIVKPEERFKSPPILPPHLLQVILNKDTGISCDPALLPEPNHVMLNHL YALSIKDGVMVLSATHRYKKKYVTTLLYKPI |
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