Gene
| Gene Model ID | habu1_s1966_g07227 |
|---|---|
| Locus | habu1_scaffold1966 : 429226 ... 465378 : + |
| To GenomeBrowser | habu1_scaffold1966:429226..465378 |
| Genes list of scaffold | habu1_scaffold1966 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1966_g07227.t2 | 1 | 1 | RabGAP-TBC | 122 | 320 | 0.0 | 179.6 | 0.0 | 0.0 | 179.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1966_g07227.t2 | gi|729731621|ref|XP_010561683.1| | PREDICTED: TBC1 domain family member 10A, partial [Haliaeetus leucocephalus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 15.6 |
| Venom grand-1 | 14.7 |
| Pit, infrared sensing | 12.7 |
| Nose | 16.4 |
| Brain-1 | 3.9 |
| Eye | 21.5 |
| fetal fibroblast | 14.5 |
| venom gland-2 | 10.4 |
| Brain-2 | 3.4 |
| Spleen | 7.4 |
| Lung | 23.0 |
| Liver | 17.4 |
| Kidney | 82.3 |
| Pancreas | 7.7 |
| Small intestine | 13.1 |
| Large intestine | 11.2 |
| Stomach | 9.3 |
| heart | 3.3 |
| ovary | 36.6 |
| cheek muscle | 11.5 |
Transcript
| Transcript ID | habu1_s1966_g07227.t1 |
|---|---|
| Definition | - |
>habu1_s1966_g07227.t1 gtccggagttaaaggacttcgcttcgctctgggctgcaaagaccgcaggtggccaggagggggcggcaaaggattaggtg ttccatgctggccgagggacccgggaaaggcggatggtgttggatgctgttaaaagatatggagacaggctacccatctc tagagcccaggagaggaaaaggagacagaccgacaaataacaacaatttgaggctggaggaggtgccgctggatgtgctg aggcagagggaatcaaaatggctggacatgctgaacaactgggacaagtggatggcgaaaaagcacaaaaagatccggct gagatgccaaaaggggatcccaccttcgctgcgtggccgggcctggcagtacctctcagggggcaaagtcaagctggaac agaacggcggcaagtttgatgagctggacgtggctgtgggggagcccaaatggctggatgtgattgagcgagatctccac cgtcaatttccattccatgagatgtttgctgctcgggggggccatgggcaacaagatctgttccgggtcctgaaagccta cactctgtaccggccggaggaagggtattgccaggcacaggccccggtcgcagcggtgctgctgatgcacatgcccgccg agcaagctttctggtgccttgtgcaaatatgtgagaaatatcttcctggctattacagtgagaagttggaggccatccag ttggatggggagatcctcttctccctgctgcagagagtctccccgctggcttacaagcatctcagcaagcagaagatcga ccccatcttgtacatgacggagtggttcatgtgcgccttctccaggaccctgccctggagctctgtgctgcgggtctggg atatgttcttctgcgaaggcgtcaagatcatcttccgcgtgggtctcgtgctcctgaagtacaccctgggttcttcggag aagctgcgaagctgccaagggcagtacgagacgatggagcagctgagagccctgaattccaaaatcatgcaagaggcttt cctcgttcaagaggtcatagagttgccagtgacggagcgccacatcgagcgggaacacctgatccagctgaagaagtgga aggagacccacggagatctgcaatgcaagtctcctccccgtttccacggcgccaaggctatcagggattctgagccgtac ccccacaaagccttggagccctctccttccatcatcctgcccccaggcgccgccctctcccccaagggccgcaagggcaa gctgcagaagggcacccccaaagggcccgtcgccgtgggcaaccaagccaacggccccatccccgaagaaaacggatctc agactttgctggagcccgactctttccttctccatcagtccaaggagagccttagttcccgggagagcgaggacacctat ctgtaggggtggggattgcactttccagatcacggaccccccctcccctccctccctcccagaccacagaccagactgta ccagggagacacaccctcgataggaaaatggttagctgggattgtaaggaggggagagcgatttgtcggagggcaggcgg attatggctgatcggtgagattcttgcgtgcggatttttttaaaaaggaaatcaattgctgaaactgttttgtacaagag gcgaaataaaccggaattatgtatattctgtg |
|
| Transcript ID | habu1_s1966_g07227.t2 |
| Definition | - |
>habu1_s1966_g07227.t2 gtccggagttaaaggacttcgcttcgctctgggctgcaaagaccgcaggtggccaggagggggcggcaaaggattaggtg ttccatgctggccgagggacccgggaaaggcggatggtgttggatgctgttaaaaggtagccaccacggaattgtcgttc tctggataacgcatgctttctgcaactcgcagacagaaaagggtacacagccagtgaaaagaggcaggatcaaaacagac gcatgacagatattgtaaggcgggtcagactcattcctgcccaagagagagaggaaaaaaagaaggaggttgaaaacgtc tcctggcctccccatggtcacgggatcaaaattcggatgcttggcaaccgactcatctttacaacggtcgcagcgtccag gggccacccgatccccttttgtgactgtctaaccagccaagccagagtaaggggaacattggataacatgccgctggagg aggtgccgctggatgtgctgaggcagagggaatcaaaatggctggacatgctgaacaactgggacaagtggatggcgaaa aagcacaaaaagatccggctgagatgccaaaaggggatcccaccttcgctgcgtggccgggcctggcagtacctctcagg gggcaaagtcaagctggaacagaacggcggcaagtttgatgagctggacgtggctgtgggggagcccaaatggctggatg tgattgagcgagatctccaccgtcaatttccattccatgagatgtttgctgctcgggggggccatgggcaacaagatctg ttccgggtcctgaaagcctacactctgtaccggccggaggaagggtattgccaggcacaggccccggtcgcagcggtgct gctgatgcacatgcccgccgagcaagctttctggtgccttgtgcaaatatgtgagaaatatcttcctggctattacagtg agaagttggaggccatccagttggatggggagatcctcttctccctgctgcagagagtctccccgctggcttacaagcat ctcagcaagcagaagatcgaccccatcttgtacatgacggagtggttcatgtgcgccttctccaggaccctgccctggag ctctgtgctgcgggtctgggatatgttcttctgcgaaggcgtcaagatcatcttccgcgtgggtctcgtgctcctgaagt acaccctgggttcttcggagaagctgcgaagctgccaagggcagtacgagacgatggagcagctgagagccctgaattcc aaaatcatgcaagaggctttcctcgttcaagaggtcatagagttgccagtgacggagcgccacatcgagcgggaacacct gatccagctgaagaagtggaaggagacccacggagatctgcaatgcaagtctcctccccgtttccacggcgccaaggcta tcagggattctgagccgtacccccacaaagccttggagccctctccttccatcatcctgcccccaggcgccgccctctcc cccaagggccgcaagggcaagctgcagaagggcacccccaaagggcccgtcgccgtgggcaaccaagccaacggccccat ccccgaagaaaacggatctcagactttgctggagcccgactctttccttctccatcagtccaaggagagccttagttccc gggagagcgaggacacctatctgtaggggtggggattgcactttccagatcacggaccccccctcccctccctccctccc agaccacagaccagactgtaccagggagacacaccctcgataggaaaatggttagctgggattgtaaggaggggagagcg atttgtcggagggcaggcggattatggctgatcggtgagattcttgcgtgcggatttttttaaaaaggaaatcaattgct gaaactgttttgtacaagaggcgaaataaaccggaattatgtatattctgtg |
|
Protein
| Protein ID | habu1_s1966_g07227.t1 |
|---|---|
| Definition | - |
>habu1_s1966_g07227.t1 MLLKDMETGYPSLEPRRGKGDRPTNNNNLRLEEVPLDVLRQRESKWLDMLNNWDKWMAKKHKKIRLRCQKGIPPSLRGRA WQYLSGGKVKLEQNGGKFDELDVAVGEPKWLDVIERDLHRQFPFHEMFAARGGHGQQDLFRVLKAYTLYRPEEGYCQAQA PVAAVLLMHMPAEQAFWCLVQICEKYLPGYYSEKLEAIQLDGEILFSLLQRVSPLAYKHLSKQKIDPILYMTEWFMCAFS RTLPWSSVLRVWDMFFCEGVKIIFRVGLVLLKYTLGSSEKLRSCQGQYETMEQLRALNSKIMQEAFLVQEVIELPVTERH IEREHLIQLKKWKETHGDLQCKSPPRFHGAKAIRDSEPYPHKALEPSPSIILPPGAALSPKGRKGKLQKGTPKGPVAVGN QANGPIPEENGSQTLLEPDSFLLHQSKESLSSRESEDTYL |
|
| Protein ID | habu1_s1966_g07227.t2 |
| Definition | - |
>habu1_s1966_g07227.t2 MTDIVRRVRLIPAQEREEKKKEVENVSWPPHGHGIKIRMLGNRLIFTTVAASRGHPIPFCDCLTSQARVRGTLDNMPLEE VPLDVLRQRESKWLDMLNNWDKWMAKKHKKIRLRCQKGIPPSLRGRAWQYLSGGKVKLEQNGGKFDELDVAVGEPKWLDV IERDLHRQFPFHEMFAARGGHGQQDLFRVLKAYTLYRPEEGYCQAQAPVAAVLLMHMPAEQAFWCLVQICEKYLPGYYSE KLEAIQLDGEILFSLLQRVSPLAYKHLSKQKIDPILYMTEWFMCAFSRTLPWSSVLRVWDMFFCEGVKIIFRVGLVLLKY TLGSSEKLRSCQGQYETMEQLRALNSKIMQEAFLVQEVIELPVTERHIEREHLIQLKKWKETHGDLQCKSPPRFHGAKAI RDSEPYPHKALEPSPSIILPPGAALSPKGRKGKLQKGTPKGPVAVGNQANGPIPEENGSQTLLEPDSFLLHQSKESLSSR ESEDTYL |
|