Gene
| Gene Model ID | habu1_s1966_g07228 |
|---|---|
| Locus | habu1_scaffold1966 : 484534 ... 526368 : + |
| To GenomeBrowser | habu1_scaffold1966:484534..526368 |
| Genes list of scaffold | habu1_scaffold1966 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1966_g07228.t1 | 2 | 1 | ACT_7 | 72 | 140 | 9.7e-37 | 124.3 | 5.3e-23 | 4.0e-19 | 67.9 |
| habu1_s1966_g07228.t1 | 2 | 2 | ACT_7 | 260 | 312 | 9.7e-37 | 124.3 | 1.6e-18 | 1.2e-14 | 53.5 |
| habu1_s1966_g07228.t1 | 1 | 1 | LIF_OSM | 559 | 642 | 1.6e-09 | 37.8 | 2.4e-11 | 1.8e-07 | 31.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1966_g07228.t1 | gi|602668578|ref|XP_007439835.1| | PREDICTED: GATS-like protein 3 [Python bivittatus] | 0.0 |
| habu1_s1966_g07228.t1 | gi|530564566|ref|XP_005278860.1| | PREDICTED: GATS-like protein 3 isoform X1 [Chrysemys picta bellii] | 0.0 |
| habu1_s1966_g07228.t1 | gi|564260153|ref|XP_006268992.1| | PREDICTED: GATS-like protein 3 [Alligator mississippiensis] | 0.0 |
| habu1_s1966_g07228.t1 | gi|719761635|ref|XP_010216365.1| | PREDICTED: GATS-like protein 3 [Tinamus guttatus] | 0.0 |
| habu1_s1966_g07228.t1 | gi|729731619|ref|XP_010561680.1| | PREDICTED: GATS-like protein 3 [Haliaeetus leucocephalus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 4.1 |
| Venom grand-1 | 5.8 |
| Pit, infrared sensing | 4.5 |
| Nose | 2.7 |
| Brain-1 | 2.1 |
| Eye | 3.3 |
| fetal fibroblast | 3.6 |
| venom gland-2 | 3.9 |
| Brain-2 | 1.6 |
| Spleen | 3.5 |
| Lung | 12.6 |
| Liver | 3.2 |
| Kidney | 337.0 |
| Pancreas | 2.9 |
| Small intestine | 1.3 |
| Large intestine | 1.8 |
| Stomach | 2.4 |
| heart | 4.3 |
| ovary | 17.4 |
| cheek muscle | 2.7 |
Transcript
| Transcript ID | habu1_s1966_g07228.t1 |
|---|---|
| Definition | - |
>habu1_s1966_g07228.t1 gcgccggcctcgctggctgcgccatggagctgcggatcctggagctccgcgtgcgggtcctgagcctggcccgccgcggc ctctggctctacacccacccgctgctcaagatgctgctcctgccccagcgcagcaggtgcaggtttttcagctttacaga gactcctgaagactacaccatcatgttggatgaagaaggcttcaaagaactccatgcctctgagttcctgcaagtggtgg attccacgtggctcgtgctgaacgtctcgtccaatggcagcgcctccctcaacaaccagccgatcggagtcaccaagatt gcaaaatccgtcattgcgccgctggccgagcacaatgtctccgttttgatgttgtccacatatcagaccgattttattct ggtacgggagaaggatctgcctgtggtcatccacaccctggccagtgaatttgaaatttataaggaggtgaatggagaac cggtccctgcaaactgtgaagacataagcaacggattccacaaggcaaagcaagagttcaacgccacggtccatccaata caaactccacagaacagattctgcatccttagcatcgcccctgaaaccttgccagccattgccacaaaactcatcgatgt cctgttctacacagccagcccgccgaaagatgcctccgctaacaaccaggacgccattactttctttgccttctccctga ttgagggctacatctctatcgtcatggatgcagagaccaagaaaaaattccctagcgacctgctgttgaccagttcctct ggggagctctggaggatggtcaggattggcgggcagccccttggtttcgatgaatgtgggatcgtggcccagattgctga acccctggcctatgcagacatctccgcctattacatcagcaccttcaactttgaccacgccttggttccagaagatggca ttgatgagatgttcctggagagagagagagagagcctgggagcccagctcctctgcaagccaaattatctttctggggac tctcaagccaagccaaaccaagccaagccaagccagtcaagtcaagtcaaatcaagtcaagtcaagtcaagtcaagtcaa gtcaagtcaagtcaagtcaagtcaagtcattcctgtcgactgcagaagaatggtggagaagtctttagcggtcgctgttc aacttgtcttggtgtccgcttcctggcttttgtgcccaaccctggtggattctacagccagcatctgccccaggtgtcca gcagattcagaatttctgcggaaaattcagctccagatcatggggttgaaacgacctactcgagacttgtacaaatccta tctgtctcacatgggcctgcaggacgacctgcgcctgttttgccagttgcccatcgcttggctccccagtagaaatatca caaagaagccggagaggctgctcttgcaagaactctacacgactgtggtccgcatcacttttatgaatgaactctcctgc gagctgctgttcctcttacgtcattctaggatgcaactttcagtgagaaccctcgttgcaggaattatctccatgctgct gatcgcacactgcagattctcatctgggagacctttgcacccaaacagaaacaattccatgtgtcacgatgttcggcctt gcaagcaccctgtctttgatcaagtgcggtgcctggtgtcacgtctgaacacgtcagctccggagttatttgagagttat ctcagaagccaaggtcccccgttcagcgagaagaaggagttggatgacttttgtgagcctgaccacgcgtttcctccttt caacagctcactgggtgacaaggagagggtgatcaacctctacaagatctttgtcttttttaacgcctccttggacaaca tcacaaaagaccaggaaagcttcgacgacggcgagaggatgtttagttttgactgaaagaggcaccaagcaatcatctgt ttggtgttagctctcacaatgttttaagtgactgtgtgaaaaattatggatgtttcaatggcataaatgtttatattttt atactttggattttatatgcattttataaaataaattgtatttttaaaaaagactcc |
|
Protein
| Protein ID | habu1_s1966_g07228.t1 |
|---|---|
| Definition | - |
>habu1_s1966_g07228.t1 MELRILELRVRVLSLARRGLWLYTHPLLKMLLLPQRSRCRFFSFTETPEDYTIMLDEEGFKELHASEFLQVVDSTWLVLN VSSNGSASLNNQPIGVTKIAKSVIAPLAEHNVSVLMLSTYQTDFILVREKDLPVVIHTLASEFEIYKEVNGEPVPANCED ISNGFHKAKQEFNATVHPIQTPQNRFCILSIAPETLPAIATKLIDVLFYTASPPKDASANNQDAITFFAFSLIEGYISIV MDAETKKKFPSDLLLTSSSGELWRMVRIGGQPLGFDECGIVAQIAEPLAYADISAYYISTFNFDHALVPEDGIDEMFLER ERESLGAQLLCKPNYLSGDSQAKPNQAKPSQSSQVKSSQVKSSQVKSSQVKSSQVIPVDCRRMVEKSLAVAVQLVLVSAS WLLCPTLVDSTASICPRCPADSEFLRKIQLQIMGLKRPTRDLYKSYLSHMGLQDDLRLFCQLPIAWLPSRNITKKPERLL LQELYTTVVRITFMNELSCELLFLLRHSRMQLSVRTLVAGIISMLLIAHCRFSSGRPLHPNRNNSMCHDVRPCKHPVFDQ VRCLVSRLNTSAPELFESYLRSQGPPFSEKKELDDFCEPDHAFPPFNSSLGDKERVINLYKIFVFFNASLDNITKDQESF DDGERMFSFD |
|