Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s2039_g07470
Locus habu1_scaffold2039 : 1 ... 11954 : +
To GenomeBrowser habu1_scaffold2039:1..11954
Genes list of scaffold habu1_scaffold2039

Annotation by Blast2GO
Annotation GO
calcineurin-like phosphoesterase domain-containing protein partial GO:0008152 GO:0016787

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s2039_g07470.t1 gi|602630260|ref|XP_007422048.1| PREDICTED: calcineurin-like phosphoesterase domain-containing protein 1 [Python bivittatus] 0.0
habu1_s2039_g07470.t1 gi|530641847|ref|XP_005307648.1| PREDICTED: calcineurin-like phosphoesterase domain-containing protein 1, partial [Chrysemys picta bellii] 0.0
habu1_s2039_g07470.t1 gi|699696422|ref|XP_009906230.1| PREDICTED: serine/threonine-protein phosphatase CPPED1 [Picoides pubescens] 0.0
habu1_s2039_g07470.t1 gi|723559664|ref|XP_010301336.1| PREDICTED: serine/threonine-protein phosphatase CPPED1-like [Balearica regulorum gibbericeps] 0.0
habu1_s2039_g07470.t1 gi|694657625|ref|XP_009484531.1| PREDICTED: serine/threonine-protein phosphatase CPPED1-like [Pelecanus crispus] 0.0

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 4.5
Venom grand-1 3.6
Pit, infrared sensing 4.7
Nose 5.7
Brain-1 2.7
Eye 2.5
fetal fibroblast 14.8
venom gland-2 2.4
Brain-2 3.1
Spleen 6.1
Lung 2.7
Liver 9.4
Kidney 10.2
Pancreas 5.2
Small intestine 4.6
Large intestine 3.2
Stomach 4.3
heart 1.4
ovary 26.5
cheek muscle 11.6

Transcript
Transcript IDhabu1_s2039_g07470.t1
Definition-
>habu1_s2039_g07470.t1
ggacggaatggcgggaggcccaaattcaggatctaagaaacgttctgaaggaccttagaagcgacatccctctggttttc
gtcagcggcaatcacgacctggggaatacacccacgccggagacggtcagcgattattgccagcagtggggtgacgatta
cttcagcttttgggtcggcggcgtcttctttctcgtgttgaattcccagctgtatttcgatgcttctcagtgctcagaac
taaaggcggtgcaggacgcgtggctggagcagcagctggccgtggcgggggaaaaaaaatgccgccacgccgtcgtcttt
cagcacatccccttcttcatcaacgaacctgaagaggaccacaactacttcaatttggagaaggctgttcgacacgagct
cctggagaaattctgccaagcaggtattaaaacagtattttctggacaccttcacaagaatgctggaggaacatacaaag
atctcgacatgatcatttcatcggccatcggatgccagctaggagatgacagccacggcgtgcggatggtgggggtcacc
gcggaaaagatcgtccatcgatattacagtctgagcgagctgagtaaccatccgaaaatcgaaaaagagtttatggcgtt
gataaaaccaaattagttctaggttctgagtagcatttttctttccgtttccgtgatttggtttttttttttaaatcata
gctctgatttccctttactcaccctgttatttgctaaggaaatacctcacagctgaaaagaatacagagatgcaaactct
gaatattt

Protein
Protein IDhabu1_s2039_g07470.t1
Definition-
>habu1_s2039_g07470.t1
TEWREAQIQDLRNVLKDLRSDIPLVFVSGNHDLGNTPTPETVSDYCQQWGDDYFSFWVGGVFFLVLNSQLYFDASQCSEL
KAVQDAWLEQQLAVAGEKKCRHAVVFQHIPFFINEPEEDHNYFNLEKAVRHELLEKFCQAGIKTVFSGHLHKNAGGTYKD
LDMIISSAIGCQLGDDSHGVRMVGVTAEKIVHRYYSLSELSNHPKIEKEFMALIKPN

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Chromosome
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495