Gene
| Gene Model ID | habu1_s2039_g07473 |
|---|---|
| Locus | habu1_scaffold2039 : 185246 ... 229487 : + |
| To GenomeBrowser | habu1_scaffold2039:185246..229487 |
| Genes list of scaffold | habu1_scaffold2039 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| rna polymerase i-specific transcription initiation factor rrn3 isoform x2 | GO:0005730 GO:0006361 GO:0007000 GO:0007028 GO:0008283 GO:0042254 GO:0045893 GO:0048872 GO:0070063 GO:1902254 GO:2000142 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2039_g07473.t1 | 1 | 1 | Ribosomal_L1 | 26 | 244 | 3.64338e-44 | 150.7 | 0.0 | 6.72623e-44 | 149.8 |
| habu1_s2039_g07473.t1 | 1 | 1 | TMEM238 | 454 | 489 | 1.7e-09 | 37.4 | 1.0e-12 | 3.8e-09 | 36.3 |
| habu1_s2039_g07473.t1 | 1 | 1 | RRN3 | 637 | 974 | 0.0 | 354.0 | 0.0 | 0.0 | 353.5 |
| habu1_s2039_g07473.t1 | 1 | 1 | N_Asn_amidohyd | 1108 | 1381 | 0.0 | 375.9 | 0.0 | 0.0 | 375.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2039_g07473.t1 | gi|602630278|ref|XP_007422056.1| | PREDICTED: protein N-terminal asparagine amidohydrolase [Python bivittatus] | 0.0 |
| habu1_s2039_g07473.t1 | gi|602630276|ref|XP_007422055.1| | PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3 isoform X2 [Python bivittatus] | 0.0 |
| habu1_s2039_g07473.t1 | gi|602630274|ref|XP_007422054.1| | PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3 isoform X1 [Python bivittatus] | 0.0 |
| habu1_s2039_g07473.t1 | gi|602630266|ref|XP_007422051.1| | PREDICTED: ribosomal L1 domain-containing protein 1 [Python bivittatus] | 0.0 |
| habu1_s2039_g07473.t1 | gi|637359256|ref|XP_008119876.1| | PREDICTED: LOW QUALITY PROTEIN: RNA polymerase I-specific transcription initiation factor RRN3 [Anolis carolinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 6.0 |
| Venom grand-1 | 8.7 |
| Pit, infrared sensing | 7.2 |
| Nose | 6.6 |
| Brain-1 | 4.3 |
| Eye | 4.8 |
| fetal fibroblast | 26.8 |
| venom gland-2 | 19.8 |
| Brain-2 | 4.1 |
| Spleen | 5.8 |
| Lung | 4.4 |
| Liver | 8.9 |
| Kidney | 7.8 |
| Pancreas | 10.7 |
| Small intestine | 5.5 |
| Large intestine | 4.8 |
| Stomach | 8.2 |
| heart | 6.5 |
| ovary | 29.9 |
| cheek muscle | 12.2 |
Transcript
| Transcript ID | habu1_s2039_g07473.t1 |
|---|---|
| Definition | - |
>habu1_s2039_g07473.t1 gagaaggctgtcccacgtggaaggagaagcatggaggaggcaaaggtggagccggcggcgctgccggctttggatcaagg ccagatcaaaaaagccactcaagccttgcttgcatataatgcgaacaaacagaagtccggagacaaagtgctgttggacg tagaccagaatgtctttttgatggttactgtctggaaaatcccaccaaaggagcaagtaatcaaaataaacctgcctcgt agcattctgccagacacatctgaggtttgcctcttcaccaaagatgaacctggcttaacggcggaacagactgagacctt gtacaagaagctgttggaccaacatggaatcacacgcatcaatgaggtcatctcctacaaaaccttcaaaacggaataca agccctttgaagcgaaacgccgcctcctgaaccgctttgcccttttcttgtccgatgatcgtattagaagattgctacct tcgcagatgggaaaacatttctatcagtgtaaaaaggcccctctctgtgtggatctgaaagccaaggacctagctaagga aatcaataaacgcatccatggaacgatcctcccagtcactaacaagggcagttgctacatggttcgcattgggcacacca gcatggaagcgtcggagatcactgaaaatgttatggcagctgccaaagcagtagctatcaaagctccacagatctggaaa agcgtgaaagttcttcacctcaaaaccagcaagtccattgcacttcctgtctttcactctgctctccatggtgtggctgc tgttcagaaaaagaaaggagccggaatccaacagactccgaaaagaaagaaaaagagaaggaagactaagccgaaggcca cgggtcaggcggacacaaaagacaacgtgagtggggctcttgaagctgacatgcctaaaacggacggggtggaacccact gccctggaatcaaaagaggaagaagaggaagacattccacaactggttcctatggaaacgcagcccgctgagaaaaagga ggagcaggtggcaaaactgagattgagtgaaaaaaaccagctggagatggacttgccgaggctccgtagcaaaagaaaga gcattctttcggcagagattcctgtttcacagccagaaacacccgaagaggccacagccttagagaaatcaaatcaacag aggcctggtcgaaaatccaagatgcccaaggaagagtttttgggaaaaatgcagagcaaggatgcccagcagcccttggc gaaaccaactgtggttcttaaaaggctacaagctcctaaatcagacaagaaacctaaaacccccaaacgggaactgagaa aaatgaaattgccgctcttgctggactcgtccgtctccgacctgctcatctacctgggcggcgtgggcgtcttcttcagc ctgccctggtgggtcttctggcacgtgggcaacctggaggtgccgcccgacgagctgcgggacgacgtggggctgggctc ccgaagcggcgacgcctggagcctggagagctggcgcgcccggcgcctggctctcctcgcccgcgccttcagcacccact tctcgttgccctccgccatcgcctcctgctccgccccgtcccaggccggccgcctccgcgcccacttcgccgcctccagc atcagcaccagcaccggcggcggccccgacgaggcggagaagctgcagcagccgtcccagcaatcccagcaatcccagga cggggcatccgatccggcccttgcaagagccagcacgcccccctccctgcccaccctctccctttccaacgtcggcacaa taaccctgcagggtttgattggaagctttaattcgtggaaagatccccgaataaccatccgggaaaatgacgtggacatc tctgattcagacgacgatgaaacgttgaggcacgacattttggagctggttgttgagaagctgctaaaaatagatgtaag tgctccgagaaaagatattgaagctgccgaagaagatgaagagggaaacagtgagaagggactcttcaatatggatgaag atggggagaatccggagaagagtgacatcatggctcaccccattgcggaacgccttgacatcttgatgagtgtgatgttt tcctacattaaagatgtgtgctacgttaatgggaaaattgaggttggcaacaccaaagacttataccgagacctggtggc tgtatttgataagctgattttaacaacccatggatcgtgtcacgtgcagttcatcatgttctatctctctagtttcagac tggtaatcgcagaagctttcgtggaacatctctggaaaaagctacagaacccaaatgttcccgctgtcatccggcaaacc accgggaactacattggcagctttttggcacgggccaattttattcccattgtgacagtgaaagcctgcctagatctcct ggtcagctggctgcacacctacatcgacaaccagggcacggggtcccgagcattttgcgacgttgcgctccatggtccgt tctacgcagcctgccaggctgtgttctacatagtcatctttcgccacaagcagatcctggatggaaacctcaagaaaggt ttggcctacctacaaaacttaaactttgagcgcattgttctgtgtcagctaaatcccctgaaggtctgcctgccaaccat tgtgagtctctttgcggcccttaccaggaagtaccaggtggccttctgtgacaccatcattgagagaaaccggagacaaa tattgccagttgtccgaagcagctgtgggggagagtctgttgagacagtcacaaacccccttgacagttttttcccgttc gatccttacatccttaaaaggtcaaagaacacaatcaatcctttgtatcagttttgggaagagcagagtgccgaggacct caaggagaccgcagaacccaccactgaggtgagcagtttcattcaagctccatcagtacgtttccttgtgaaggatgttt gcttctccctggagctgggaagtttgctaattccggcatatcggggaggttttcagttgaaggaggtcatcttagatcag cagcgaggaacctgcaagttccagacgttgtgtgaacgccagcatctcaccatccttcagcattggccctaccaagaaga cccagaaactctgaaattaacaacagacaagccacaggtagatgccatgtatttaggagaccccttgcaaggagcatcaa ctggagtcaacgtgctgaacatagacctgtacaaacaaaaactcttgttccccaatcaggagcaagccaaacagttccgc agccaacctgctcaagcggtgggaccaaaaggacttctctacgtccagcaaagagaatttgctgctaccacgtccaaaga tggttccgtttccattcttggctcagacgatgctacaacgtgccattttgtggtcctgagacacacagggagtggagcaa tttgtctaactcactgtgatggatcagataccgaaacagaagttctgctggtgataaatgcagtaaaagtgctttctcca agcactgactgtggaaggttggagttgcatctgattggaggtttttgtgacgaccggcgcctgtctcagcgtcttaccag tcaactcttaagagcgtttgaccgtctgctagataatgtttatttgatgacattctgtgtcacagaactgaatgaccgcc aggaaaatggcaggcatttgccatatatttacggaattgctgcgaatgttaaaactggtgagattttccacgccacgttt ccagaccgaggccctgatgaagacatgcggtctgccagggtcttagcaggagcaaagatgatcagcatttacgacccaaa gaaggaacaactttgcattgggccttactactggatgcctttcccccacgtggatttctggttggagcagagcaaccaga gcatcttacagaatctctccacttcgcctctggcggagcccccccatttcgtggcccacatccgagctactctgctctac ctaagagaacatccgttccccgataagactctcttccccacacagaaacctcgcctctacaaaaaaaatgtggagggctt gtgggagagagtctctggccagatctgacccaaagcagaggaaccaggagcgctccggaagtgaaaatcaaggaagatgg tcagagaccttccctatgacgtgcacatttacctggattttgctagttggttcttttaaccatcacaaactcaagataca acaagttgaagaacttttattgaagcatttaggaagtatctaaattaggactgtattccagcaaaactgccagcttgata taaaacctttaaaatttatattaacaattataactttaacctttccccccctcatgaacccaagttaatataaatcattg cactaaataaacagtcaaaaggaagacaattca |
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Protein
| Protein ID | habu1_s2039_g07473.t1 |
|---|---|
| Definition | - |
>habu1_s2039_g07473.t1 MEEAKVEPAALPALDQGQIKKATQALLAYNANKQKSGDKVLLDVDQNVFLMVTVWKIPPKEQVIKINLPRSILPDTSEVC LFTKDEPGLTAEQTETLYKKLLDQHGITRINEVISYKTFKTEYKPFEAKRRLLNRFALFLSDDRIRRLLPSQMGKHFYQC KKAPLCVDLKAKDLAKEINKRIHGTILPVTNKGSCYMVRIGHTSMEASEITENVMAAAKAVAIKAPQIWKSVKVLHLKTS KSIALPVFHSALHGVAAVQKKKGAGIQQTPKRKKKRRKTKPKATGQADTKDNVSGALEADMPKTDGVEPTALESKEEEEE DIPQLVPMETQPAEKKEEQVAKLRLSEKNQLEMDLPRLRSKRKSILSAEIPVSQPETPEEATALEKSNQQRPGRKSKMPK EEFLGKMQSKDAQQPLAKPTVVLKRLQAPKSDKKPKTPKRELRKMKLPLLLDSSVSDLLIYLGGVGVFFSLPWWVFWHVG NLEVPPDELRDDVGLGSRSGDAWSLESWRARRLALLARAFSTHFSLPSAIASCSAPSQAGRLRAHFAASSISTSTGGGPD EAEKLQQPSQQSQQSQDGASDPALARASTPPSLPTLSLSNVGTITLQGLIGSFNSWKDPRITIRENDVDISDSDDDETLR HDILELVVEKLLKIDVSAPRKDIEAAEEDEEGNSEKGLFNMDEDGENPEKSDIMAHPIAERLDILMSVMFSYIKDVCYVN GKIEVGNTKDLYRDLVAVFDKLILTTHGSCHVQFIMFYLSSFRLVIAEAFVEHLWKKLQNPNVPAVIRQTTGNYIGSFLA RANFIPIVTVKACLDLLVSWLHTYIDNQGTGSRAFCDVALHGPFYAACQAVFYIVIFRHKQILDGNLKKGLAYLQNLNFE RIVLCQLNPLKVCLPTIVSLFAALTRKYQVAFCDTIIERNRRQILPVVRSSCGGESVETVTNPLDSFFPFDPYILKRSKN TINPLYQFWEEQSAEDLKETAEPTTEVSSFIQAPSVRFLVKDVCFSLELGSLLIPAYRGGFQLKEVILDQQRGTCKFQTL CERQHLTILQHWPYQEDPETLKLTTDKPQVDAMYLGDPLQGASTGVNVLNIDLYKQKLLFPNQEQAKQFRSQPAQAVGPK GLLYVQQREFAATTSKDGSVSILGSDDATTCHFVVLRHTGSGAICLTHCDGSDTETEVLLVINAVKVLSPSTDCGRLELH LIGGFCDDRRLSQRLTSQLLRAFDRLLDNVYLMTFCVTELNDRQENGRHLPYIYGIAANVKTGEIFHATFPDRGPDEDMR SARVLAGAKMISIYDPKKEQLCIGPYYWMPFPHVDFWLEQSNQSILQNLSTSPLAEPPHFVAHIRATLLYLREHPFPDKT LFPTQKPRLYKKNVEGLWERVSGQI |
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