Gene
| Gene Model ID | habu1_s2039_g07475 |
|---|---|
| Locus | habu1_scaffold2039 : 263536 ... 293077 : + |
| To GenomeBrowser | habu1_scaffold2039:263536..293077 |
| Genes list of scaffold | habu1_scaffold2039 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2039_g07475.t4 | 1 | 1 | Mpv17_PMP22 | 1 | 65 | 8.7e-22 | 76.5 | 8.0e-26 | 1.2e-21 | 76.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2039_g07475.t4 | gi|602630282|ref|XP_007422058.1| | PREDICTED: mpv17-like protein [Python bivittatus] | 1.00053e-42 |
| habu1_s2039_g07475.t4 | gi|591366737|ref|XP_007058223.1| | PREDICTED: mpv17-like protein [Chelonia mydas] | 7.0e-40 |
| habu1_s2039_g07475.t4 | gi|557285754|ref|XP_006025658.1| | PREDICTED: mpv17-like protein [Alligator sinensis] | 1.0e-39 |
| habu1_s2039_g07475.t4 | gi|706125086|ref|XP_010197732.1| | PREDICTED: mpv17-like protein [Colius striatus] | 1.0e-39 |
| habu1_s2039_g07475.t4 | gi|697507812|ref|XP_009681752.1| | PREDICTED: mpv17-like protein [Struthio camelus australis] | 3.0e-39 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.6 |
| Venom grand-1 | 1.1 |
| Pit, infrared sensing | 0.8 |
| Nose | 3.8 |
| Brain-1 | 30.6 |
| Eye | 14.7 |
| fetal fibroblast | 0.3 |
| venom gland-2 | 0.8 |
| Brain-2 | 37.9 |
| Spleen | 7.4 |
| Lung | 2.5 |
| Liver | 1.0 |
| Kidney | 1.3 |
| Pancreas | 25.9 |
| Small intestine | 0.9 |
| Large intestine | 1.8 |
| Stomach | 2.0 |
| heart | 1.0 |
| ovary | 7.7 |
| cheek muscle | 3.3 |
Transcript
| Transcript ID | habu1_s2039_g07475.t1 |
|---|---|
| Definition | - |
>habu1_s2039_g07475.t1 gaagcaagatgtaatgttctgaagatcaactcgacatcatttcaatggcagaaacaagcatgatgcccgaggagatagag atggaaatggcaaagattcaaagacttcgggaagtcttggtccgaagagaatccgaactgagatttatgatggacgacat ccagttgtgcaaagacattatgactcttaagaaagagctgcagaatttagtagctgtcccagaaaaagacaagactaagc tgcagaatcaaagagaggatgaattgatccagaaaatccacaaattagtgcagaaaagagactttcttgttgatgatgcc gaagtggagagattgagagagaaggaagaagacaaggagatagctgatttcctacggattaagttgagacctttggacaa tgttgtacagtctcccactagggtaccgacagagaagcaagctgagcctcctccaccaccaccaccacttcctcccaaca agcccaccattgccaaaaccagtgctgctctcattaaggattgctgtgggatgacccagtgcgccatcatgtagctccag catctccctcgggcagcgccttctgctcaacccacttccccgttggccaaaaacaaaaaacctggtgggcgaaggaatca ggacatcaagcacccagatattcttgatcgttgaatctcctgttgtatttcttacagtaacttgtgtgccgaaatgtgct attcttggtgactccttggtgttgcatggacctcggcgagcatgccctaggttaagacgaggagtagacgttaactgtac ccagaacgcagagaagacctgtgaggcgtagacgtagacgagggagtggcttatggcttgcaggtaacatcagggggcca tctgtatgtttagagctgcgtccagaccgtccacccaggcttgatctgggttgtgagtcaactcactttctggttttgca caggatgctaagtcatctccataaggtaggaagaacagccaaggtgaacactgggcttagcatgctgtgtgaatatatct gctaccgtaggtcttgacctgacgtggtaaaccatggtctgaatccagccgataggcaaattctgcatatgggtaggacc gattcttagcctaatgccagctctgaagtaggaacaacatgtagcagttttaatggtctgttgtgcactggatacatctc accccgtcttcctttagcaggcggtatttgatcggtgggcgaacggaggcgagcaccctccgtgtagctggattgggtcc ttttcgcaatgacatgtgtgttaataaaaacgctaaatagaatagctaat |
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| Transcript ID | habu1_s2039_g07475.t2 |
| Definition | - |
>habu1_s2039_g07475.t2 acgtctgtcccaaagccctaaatattaagaaaataaatgcagagggagaaactttacgatctaatcaaacatctgctggg atggactaaaaggaagtgggtcccaggccggctgaagtctccaaggaagagcaaacgggggcccaggtagcatccaacaa cagcatggaattaaagcaacccatctccagcagcttgggagccgagaaaccgccgaggagctatggggcggtgaaagaga cggagtggaaacccaccgatgggttcgggaaaaatcaactcgacatcatttcaatggcagaaacaagcatgatgcccgag gagatagagatggaaatggcaaagattcaaagacttcgggaagtcttggtccgaagagaatccgaactgagatttatgat ggacgacatccagttgtgcaaagacattatgactcttaagaaagagctgcagaatttagtagctgtcccagaaaaagaca agactaagctgcagaatcaaagagaggatgaattgatccagaaaatccacaaattagtgcagaaaagagactttcttgtt gatgatgccgaagtggagagattgagagagaaggaagaagacaaggagatagctgatttcctacggattaagttgagacc tttggacaatgttgtacagtctcccactagggtaccgacagagaagcaagctgagcctcctccaccaccaccaccacttc ctcccaacaagcccaccattgccaaaaccagtgctgctctcattaaggattgctgtgggatgacccagtgcgccatcatg tagctccagcatctccctcgggcagcgccttctgctcaacccacttccccgttggccaaaaacaaaaaacctggtgggcg aaggaatcaggacatcaagcacccagatattcttgatcgttgaatctcctgttgtatttcttacagtaacttgtgtgccg aaatgtgctattcttggtgactccttggtgttgcatggacctcggcgagcatgccctaggttaagacgaggagtagacgt taactgtacccagaacgcagagaagacctgtgaggcgtagacgtagacgagggagtggcttatggcttgcaggtaacatc agggggccatctgtatgtttagagctgcgtccagaccgtccacccaggcttgatctgggttgtgagtcaactcactttct ggttttgcacaggatgctaagtcatctccataaggtaggaagaacagccaaggtgaacactgggcttagcatgctgtgtg aatatatctgctaccgtaggtcttgacctgacgtggtaaaccatggtctgaatccagccgataggcaaattctgcatatg ggtaggaccgattcttagcctaatgccagctctgaagtaggaacaacatgtagcagttttaatggtctgttgtgcactgg atacatctcaccccgtcttcctttagcaggcggtatttgatcggtgggcgaacggaggcgagcaccctccgtgtagctgg attgggtccttttcgcaatgacatgtgtgttaataaaaacgctaaatagaatagctaat |
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| Transcript ID | habu1_s2039_g07475.t3 |
| Definition | - |
>habu1_s2039_g07475.t3 accgggagggggggagcaggcatgagaatgcttcaaggaaaagaggatatttttgctgactgcaggcagaaattctggaa cacctataagacagggttgatgtactggccttttgtacagctttccaacttcagcttggttccggtgtacctgagaacag cgtttactggtgtctgtggcttcctctgggccattttcctttgcttttcacaacaaagtggtgacggaacagcgacgaac aaaaggaaagatcaactcgacatcatttcaatggcagaaacaagcatgatgcccgaggagatagagatggaaatggcaaa gattcaaagacttcgggaagtcttggtccgaagagaatccgaactgagatttatgatggacgacatccagttgtgcaaag acattatgactcttaagaaagagctgcagaatttagtagctgtcccagaaaaagacaagactaagctgcagaatcaaaga gaggatgaattgatccagaaaatccacaaattagtgcagaaaagagactttcttgttgatgatgccgaagtggagagatt gagagagaaggaagaagacaaggagatagctgatttcctacggattaagttgagacctttggacaatgttgtacagtctc ccactagggtaccgacagagaagcaagctgagcctcctccaccaccaccaccacttcctcccaacaagcccaccattgcc aaaaccagtgctgctctcattaaggattgctgtgggatgacccagtgcgccatcatgtagctccagcatctccctcgggc agcgccttctgctcaacccacttccccgttggccaaaaacaaaaaacctggtgggcgaaggaatcaggacatcaagcacc cagatattcttgatcgttgaatctcctgttgtatttcttacagtaacttgtgtgccgaaatgtgctattcttggtgactc cttggtgttgcatggacctcggcgagcatgccctaggttaagacgaggagtagacgttaactgtacccagaacgcagaga agacctgtgaggcgtagacgtagacgagggagtggcttatggcttgcaggtaacatcagggggccatctgtatgtttaga gctgcgtccagaccgtccacccaggcttgatctgggttgtgagtcaactcactttctggttttgcacaggatgctaagtc atctccataaggtaggaagaacagccaaggtgaacactgggcttagcatgctgtgtgaatatatctgctaccgtaggtct tgacctgacgtggtaaaccatggtctgaatccagccgataggcaaattctgcatatgggtaggaccgattcttagcctaa tgccagctctgaagtaggaacaacatgtagcagttttaatggtctgttgtgcactggatacatctcaccccgtcttcctt tagcaggcggtatttgatcggtgggcgaacggaggcgagcaccctccgtgtagctggattgggtccttttcgcaatgaca tgtgtgttaataaaaacgctaaatagaatagctaat |
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| Transcript ID | habu1_s2039_g07475.t4 |
| Definition | - |
>habu1_s2039_g07475.t4 accgggagggggggagcaggcatgagaatgcttcaaggaaaagaggatatttttgctgactgcaggcagaaattctggaa cacctataagacagggttgatgtactggccttttgtacagctttccaacttcagcttggttccggtgtacctgagaacag cgtttactggtgtctgtggcttcctctgggccattttcctttgcttttcacaacaaagtggtgacggaacagcgaccgat tcacctgacaatcgtggcattaaaagaaaaggccatggaatcaggttcataaaatgcttgagaagaagagaaagaagagc agcactgcttttgcaaaggaaactacgtgatccagatgcctggtgcactttggcacaagcagtgtggaatcccagctgaa gagaagcagtaaccttgccggtaacggtttgtgtaaatttccatcaaggtcatcttctccctacaattacagaattttga aagctctgaggtttttttttctttatctccttaaaccaggagtccctaaactcttcagctcattgatcagtttcagatgg gtcactggctcctaaacattcacaatgtgaacataatttaataaatactactttaactaacagtatt |
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Protein
| Protein ID | habu1_s2039_g07475.t1 |
|---|---|
| Definition | - |
>habu1_s2039_g07475.t1 MAETSMMPEEIEMEMAKIQRLREVLVRRESELRFMMDDIQLCKDIMTLKKELQNLVAVPEKDKTKLQNQREDELIQKIHK LVQKRDFLVDDAEVERLREKEEDKEIADFLRIKLRPLDNVVQSPTRVPTEKQAEPPPPPPPLPPNKPTIAKTSAALIKDC CGMTQCAIM |
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| Protein ID | habu1_s2039_g07475.t2 |
| Definition | - |
>habu1_s2039_g07475.t2 MELKQPISSSLGAEKPPRSYGAVKETEWKPTDGFGKNQLDIISMAETSMMPEEIEMEMAKIQRLREVLVRRESELRFMMD DIQLCKDIMTLKKELQNLVAVPEKDKTKLQNQREDELIQKIHKLVQKRDFLVDDAEVERLREKEEDKEIADFLRIKLRPL DNVVQSPTRVPTEKQAEPPPPPPPLPPNKPTIAKTSAALIKDCCGMTQCAIM |
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| Protein ID | habu1_s2039_g07475.t3 |
| Definition | - |
>habu1_s2039_g07475.t3 MRMLQGKEDIFADCRQKFWNTYKTGLMYWPFVQLSNFSLVPVYLRTAFTGVCGFLWAIFLCFSQQSGDGTATNKRKDQLD IISMAETSMMPEEIEMEMAKIQRLREVLVRRESELRFMMDDIQLCKDIMTLKKELQNLVAVPEKDKTKLQNQREDELIQK IHKLVQKRDFLVDDAEVERLREKEEDKEIADFLRIKLRPLDNVVQSPTRVPTEKQAEPPPPPPPLPPNKPTIAKTSAALI KDCCGMTQCAIM |
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| Protein ID | habu1_s2039_g07475.t4 |
| Definition | - |
>habu1_s2039_g07475.t4 MRMLQGKEDIFADCRQKFWNTYKTGLMYWPFVQLSNFSLVPVYLRTAFTGVCGFLWAIFLCFSQQSGDGTATDSPDNRGI KRKGHGIRFIKCLRRRERRAALLLQRKLRDPDAWCTLAQAVWNPS |
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