Gene
| Gene Model ID | habu1_s2039_g07478 |
|---|---|
| Locus | habu1_scaffold2039 : 382308 ... 395555 : - |
| To GenomeBrowser | habu1_scaffold2039:382308..395555 |
| Genes list of scaffold | habu1_scaffold2039 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| multidrug resistance-associated protein 6 | GO:0005524 GO:0008152 GO:0016021 GO:0042626 GO:0055085 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2039_g07478.t1 | 2 | 1 | ABC_tran | 15 | 98 | 3.09995e-41 | 140.9 | 8.4e-12 | 2.1e-08 | 34.5 |
| habu1_s2039_g07478.t1 | 1 | 1 | ABC_membrane | 272 | 529 | 1.4e-30 | 106.6 | 7.7e-34 | 1.9e-30 | 106.2 |
| habu1_s2039_g07478.t1 | 2 | 2 | ABC_tran | 596 | 744 | 3.09995e-41 | 140.9 | 4.3e-33 | 1.1e-29 | 103.5 |
| habu1_s2039_g07478.t1 | 1 | 1 | SMC_N | 635 | 787 | 4.7e-07 | 29.2 | 8.6e-07 | 0.0021 | 17.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2039_g07478.t1 | gi|602655945|ref|XP_007433713.1| | PREDICTED: multidrug resistance-associated protein 6-like [Python bivittatus] | 0.0 |
| habu1_s2039_g07478.t1 | gi|637359288|ref|XP_008119882.1| | PREDICTED: multidrug resistance-associated protein 6 [Anolis carolinensis] | 0.0 |
| habu1_s2039_g07478.t1 | gi|641776407|ref|XP_008171447.1| | PREDICTED: multidrug resistance-associated protein 6 [Chrysemys picta bellii] | 0.0 |
| habu1_s2039_g07478.t1 | gi|557285750|ref|XP_006025656.1| | PREDICTED: multidrug resistance-associated protein 6 [Alligator sinensis] | 0.0 |
| habu1_s2039_g07478.t1 | gi|591366739|ref|XP_007058224.1| | PREDICTED: multidrug resistance-associated protein 1-like [Chelonia mydas] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.1 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.2 |
| Nose | 0.0 |
| Brain-1 | 0.0 |
| Eye | 0.1 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.0 |
| Brain-2 | 0.1 |
| Spleen | 1.4 |
| Lung | 0.3 |
| Liver | 32.1 |
| Kidney | 44.5 |
| Pancreas | 4.7 |
| Small intestine | 0.9 |
| Large intestine | 1.0 |
| Stomach | 0.1 |
| heart | 0.3 |
| ovary | 0.0 |
| cheek muscle | 0.1 |
Transcript
| Transcript ID | habu1_s2039_g07478.t1 |
|---|---|
| Definition | - |
>habu1_s2039_g07478.t1 actttttcgaaataatatcgaaagcagaccatcatccccaaacgtgtgctgattcatgcatttttctgttagatccaaac tgcattatggtcacgaatggaactttcagctggtgcagagaaggcagtccgtgcctgaataggataaatcttacggtacc tcggggcagtctgtgtgctgtggtgggtcaagtgggggctggcaaatcctccctgctctcagcattacttggtgaactgc aaagaatggaaggttccgtagtaatcaagggcaccatagcgttggctccccagatatcctggatacaaaatgcttctgta gaagacaatatcgtatttgggggaaaaatggagaggacatggtacaatgaggtggtcaaagcttgcgccctgcagcccga catagacagttttccagctggaagccagacagaaattggagagaagggcatcaatctttctggagggcaaaagcagaggc tcagcctggctcgtgcagtttatacgaatgcctcagtttacctcctggacgatcccctctccgctgtggatgctccagtt ggccggcacattttcaaccaagttcttggaccaaatggcttgttgaaggaaaagactcgcatcctggcgaccaactccat ccacgttcttcccaaagtggacaacatcattgtgatggtgaatggagaactgtgtgagatgggctcttggcaagaactga tacaaaagcaaggggcattttcagacttcttgaggtcccagaactctgaagaaaaagaccaccaggatttgcatatgact gctggtcatctcaaagatatgggaaacattaagaggatctccacaactcctgtgacacaggaagaaacccctggaaagac aagtcagcctttggccaagagagacagttataagccaacggatgagcaaggaaaaagactaatgatagaagagaagaagc aaaagactggacgggtaaagatttcagtatacctgaagtacctaagaactgcaggctccctcttctgggtttatattgta ctcctgtttgcctgccagcaagttttctcattctgccgtggctattggctcagcctgtgggccaatgaccccatttccaa tgggacacagcctcatacccagctccgcgtgggcgtcttttttctcctaggattcacgcaagcccttggaaaattcggat ctgttgctgctgtgtttttggccgggatcgtggcttcccgtaagctcttccagcagctcctgtgggatgttctccggtct ccaatgatcttctttgagcagactcccagcggtaacctactcaaccgtttctccaaagaaatggacgcaattgattccat catcccggacaagctgaagtctctgctgggcttcctatttaaccttctggagatctatgttgtggttgtggtggccaccc cgatggttttggtggctattttgcctctgtcagccttatacgttgctgttcaggtcttttttgtcaccacctcctgccag ctgaaacgcttggaagccgcaagccgctcgcccatctattcccacatctctgagacctttgaggggagcagcctcattcg tgctttcagagcccagcagcgttttgttgtccagaatgaggtcagagtagatgaaaaccagaaggtgtctttccctgcgg tggttgctgacagatggcttgccaccaacattgagattctgggggacaccattgtcctctttgcagctttgctcgctgtg gtgtacaaagcccatctcagtcctggcatggtgggcttttccatctcctgtgctcttcagatcactggcatcctgaactg gatggtgcgtgcctcggcggagattgataaccaaatcatgtctgtggaaagagttaaagattattcacagagccccaaag aggctccgtggactttggatgatcctctccagggtggcaggtggcccactgaaggggcaattgaactcagaggctatagt ttacgatacaggccagaattaagcctagctctgaagaatatcaacctaaagatcaaacctcatgaaaaggtgggcatcgt tggaagaacaggggctgggaaatcgtcccttgcgatggggcttctgagactcgtggaagctgctgatggggagattgtga ttgacggaatcaacattgcccaaatgggcctgcacaacttgagaagcaagattacgattgtcccacaggacccagtcttg tttgggggttctttgagagagaacctcgatcccttggaccaatactcggatggggatatctggaccgctttggagcagac ccaactcaagagctttgtttcagatttgccaggtcagctggcctatgagtgctctgaaggaggtggagatctaagtgttg gtcaacagcagctcatctgcctgacccggggtctacttcggaaagccaaaatcctgattctggatgaggccaccgcagct gtggaccttgaaacagacctgcagattcagtccaccataaggagtcagttcaaggactgcacaattttgaccattgccca tcggctaaacgccatgatggaatttgaccgaattttagtgatgaaaaacggacaagtggccgaattcgacaccccagaag cattgagagatcagaagggactattctacaaaatggcggcggactcagggctggtgcagagcagatggggaacagaagtc tgactcttcccagcttaatttcaacatggccctttgctggaccacaatgctgaaaccagcaggcactgaccatgatccac gcctggctcaagcagatgccgctgcctacgccgtccctgccagccgaaaacattgtgcagatggttgccaggagccgttg caacggcctgcattttggcgtgatcgtgtcaaagatgtcacccattgactcataatctccttcactgccctgttgctttg tccccaattaaagcaacgaaattactgaaatagt |
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Protein
| Protein ID | habu1_s2039_g07478.t1 |
|---|---|
| Definition | - |
>habu1_s2039_g07478.t1 MEGSVVIKGTIALAPQISWIQNASVEDNIVFGGKMERTWYNEVVKACALQPDIDSFPAGSQTEIGEKGINLSGGQKQRLS LARAVYTNASVYLLDDPLSAVDAPVGRHIFNQVLGPNGLLKEKTRILATNSIHVLPKVDNIIVMVNGELCEMGSWQELIQ KQGAFSDFLRSQNSEEKDHQDLHMTAGHLKDMGNIKRISTTPVTQEETPGKTSQPLAKRDSYKPTDEQGKRLMIEEKKQK TGRVKISVYLKYLRTAGSLFWVYIVLLFACQQVFSFCRGYWLSLWANDPISNGTQPHTQLRVGVFFLLGFTQALGKFGSV AAVFLAGIVASRKLFQQLLWDVLRSPMIFFEQTPSGNLLNRFSKEMDAIDSIIPDKLKSLLGFLFNLLEIYVVVVVATPM VLVAILPLSALYVAVQVFFVTTSCQLKRLEAASRSPIYSHISETFEGSSLIRAFRAQQRFVVQNEVRVDENQKVSFPAVV ADRWLATNIEILGDTIVLFAALLAVVYKAHLSPGMVGFSISCALQITGILNWMVRASAEIDNQIMSVERVKDYSQSPKEA PWTLDDPLQGGRWPTEGAIELRGYSLRYRPELSLALKNINLKIKPHEKVGIVGRTGAGKSSLAMGLLRLVEAADGEIVID GINIAQMGLHNLRSKITIVPQDPVLFGGSLRENLDPLDQYSDGDIWTALEQTQLKSFVSDLPGQLAYECSEGGGDLSVGQ QQLICLTRGLLRKAKILILDEATAAVDLETDLQIQSTIRSQFKDCTILTIAHRLNAMMEFDRILVMKNGQVAEFDTPEAL RDQKGLFYKMAADSGLVQSRWGTEV |
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