Gene
| Gene Model ID | habu1_s2064_g07509 |
|---|---|
| Locus | habu1_scaffold2064 : 315026 ... 325580 : + |
| To GenomeBrowser | habu1_scaffold2064:315026..325580 |
| Genes list of scaffold | habu1_scaffold2064 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| aquaporin-4 isoform x1 | GO:0005737 GO:0005911 GO:0007605 GO:0009897 GO:0015250 GO:0016021 GO:0016323 GO:0070295 GO:0071346 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2064_g07509.t1 | 1 | 1 | MIP | 31 | 248 | 0.0 | 247.2 | 0.0 | 0.0 | 246.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2064_g07509.t1 | gi|602631285|ref|XP_007422548.1| | PREDICTED: aquaporin-4 [Python bivittatus] | 0.0 |
| habu1_s2064_g07509.t1 | gi|327269823|ref|XP_003219692.1| | PREDICTED: aquaporin-4 isoform X1 [Anolis carolinensis] | 0.0 |
| habu1_s2064_g07509.t1 | gi|530567052|ref|XP_005280057.1| | PREDICTED: aquaporin-4 isoform X1 [Chrysemys picta bellii] | 0.0 |
| habu1_s2064_g07509.t1 | gi|558180940|ref|XP_006127253.1| | PREDICTED: aquaporin-4 [Pelodiscus sinensis] | 0.0 |
| habu1_s2064_g07509.t1 | gi|395511579|ref|XP_003760035.1| | PREDICTED: aquaporin-4 [Sarcophilus harrisii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.0 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.1 |
| Nose | 0.0 |
| Brain-1 | 27.5 |
| Eye | 3.1 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.0 |
| Brain-2 | 25.4 |
| Spleen | 0.0 |
| Lung | 0.1 |
| Liver | 0.0 |
| Kidney | 0.0 |
| Pancreas | 0.0 |
| Small intestine | 0.0 |
| Large intestine | 0.0 |
| Stomach | 0.0 |
| heart | 0.0 |
| ovary | 0.0 |
| cheek muscle | 3.5 |
Transcript
| Transcript ID | habu1_s2064_g07509.t1 |
|---|---|
| Definition | - |
>habu1_s2064_g07509.t1 agccgggcgcgccacacgcgagaaggcatgagcgacgaagcggctcccagagcttggggtaagtgtggccgatggtgtaa ttgtgaggctgtcatggcagcatttaaaggcatctggaccaagtccttctggaagtcggtgtcagcagaatttttggcca tgctcatttttgtcttcctcagccttggctctactatcaactggggtggaagtgaaaaacccctgcctgtggacatggtc cttatttctctatgctttggactcagcattgcgacaatggtccagtgcattggacatataagtggcggccatattaaccc tgcagtgaccattgcaatggtttgcactcggaagatcagccttgccaagtcagtcttctatattgtagcccaatgcctgg gtgccatcgcaggggcaggaattctctatcttgtcactccatcaagtgtaattgggggactgggagttacccagatacat gcagaactttctagtggacatgggctcttggtggagctgataattaccttccagctggtttttactatttttgccagctg tgattctaaacgaaatgatgtcaccggttctgtggcagtggcaattggactatcggttgcaataggacatttctttgcta tcagttacacaggggccagcatgaaccctgctcggtcatttgggcctgcagttatcatgagtaactggaaagatcattgg gtgtactggctgggaccaattataggagctgtcctggcgggtgccctttatcactatgtctattgccctgatgatgagca caatttcaaggaaacttttactaagacaactcagcaacccaaaggaaaataccttgaagtagaagactccaagagccaga gggaaacagatgatctactccagaaacctggaatggtccacttcattgatctggaaaggggtgatgataagaaaggaaga gatcctaccaatgaggtgctatcatctgtatgactagcaagaagcactgaaagcaaagatcagcctgccagtatatccac agatagttttccacctataaaagaaacagacctgttgtgagtttttcacttgagataacttcaaatgttgggcaatatca tcaatgaattagctgtttaatcagatcatatgtaagaggatagtgtatatatatatatataactaacaataactaatatt tagaataaagagagaagacaaaagaaataagacaaaagtacaaaaaataacaaacaggaaaaagtaataaaaataaaaga cttccaattttct |
|
Protein
| Protein ID | habu1_s2064_g07509.t1 |
|---|---|
| Definition | - |
>habu1_s2064_g07509.t1 MSDEAAPRAWGKCGRWCNCEAVMAAFKGIWTKSFWKSVSAEFLAMLIFVFLSLGSTINWGGSEKPLPVDMVLISLCFGLS IATMVQCIGHISGGHINPAVTIAMVCTRKISLAKSVFYIVAQCLGAIAGAGILYLVTPSSVIGGLGVTQIHAELSSGHGL LVELIITFQLVFTIFASCDSKRNDVTGSVAVAIGLSVAIGHFFAISYTGASMNPARSFGPAVIMSNWKDHWVYWLGPIIG AVLAGALYHYVYCPDDEHNFKETFTKTTQQPKGKYLEVEDSKSQRETDDLLQKPGMVHFIDLERGDDKKGRDPTNEVLSS V |
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