Gene
| Gene Model ID | habu1_s2064_g07513 |
|---|---|
| Locus | habu1_scaffold2064 : 523428 ... 586925 : - |
| To GenomeBrowser | habu1_scaffold2064:523428..586925 |
| Genes list of scaffold | habu1_scaffold2064 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| transcription initiation factor tfiid subunit partial | GO:0005488 GO:0005634 GO:0010467 GO:0034645 GO:0044238 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2064_g07513.t2 | 1 | 1 | TAFH | 340 | 439 | 4.0e-30 | 103.2 | 2.7e-33 | 1.3e-29 | 101.6 |
| habu1_s2064_g07513.t2 | 1 | 1 | TAF4 | 691 | 931 | 0.0 | 229.2 | 0.0 | 0.0 | 228.2 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.4 |
| Venom grand-1 | 0.4 |
| Pit, infrared sensing | 0.5 |
| Nose | 0.6 |
| Brain-1 | 1.1 |
| Eye | 0.9 |
| fetal fibroblast | 0.6 |
| venom gland-2 | 0.3 |
| Brain-2 | 1.1 |
| Spleen | 1.3 |
| Lung | 0.3 |
| Liver | 0.4 |
| Kidney | 0.3 |
| Pancreas | 0.8 |
| Small intestine | 0.4 |
| Large intestine | 0.7 |
| Stomach | 0.9 |
| heart | 1.1 |
| ovary | 14.7 |
| cheek muscle | 1.4 |
Transcript
| Transcript ID | habu1_s2064_g07513.t1 |
|---|---|
| Definition | - |
>habu1_s2064_g07513.t1 gccgcttgtttcctcctcccgtccccttctggctggcggcctgggcatccccacgtgcatgcctgcgaagagggagaaaa gggtcgtcggcagcagcggcggatgcgtgaccgtgtggttctttgcgtgcgagctggggactctcctgctgctttgccgc accgccaactgcggagcttttgctcagctcccgagtacctttggcggctgctatgctgtggaatagcttggactgcgccg caagctctagtcctgcgccctacggtgcctttttcctccttcatgactactccgccggtgacggcaggagccgtcctggg gagggtcatggctcctgggcctcctgagcatgctctggatccccccgtgagcgcggctaacacgatccaggagctccggg ccgtgctgcccgctcagagaacgattccctccgcctcctgtccggtgattcccacgggcagccctgctagatttgtcctg aatcctgtgggcgccaagcttccccttagtttcgtcccatccttcgctcctcaaccccgagtactgcctgctcccgtaga aatcaaactagccccctcgactccggttcagcagctccccaagtctagcaacatgggtgggaggcagccagcccctctct cgggaggactcaaacccgcacaaacgacaatacagttgcctgctaattttcaaatcccccaaggaacgattctggtcaga agtaataccggtcaattaatgttgatatctcaacaagcattattacaaactcagagtcagacctcaaataataccagtgt aagatgctcaatacctccacctacaatcaaaattcagcctgtacagagttctggaactcaggtacttaaagtactaacgg ctcctgttaaaacgctgtcttgggcaactcattctgttacttctgctgttaagaagcctgctataattcagtctgtagca tcaccaaatattataggcttgacagcaaaatcacaagttgctggatcatcagcaaagcctcctgtttctgactctccagt gttggctttcacttcaaaaccagttgctgatacaggtgactcaagagccacccagcctatcagttatacggaaatgctgg aaaatgtgaaaaagtgcaaaaacttccttacaacactaataaaactggcatccagtggatctcaagcatctcaaacaggg cagactgtgaagaatctggttcaaagtctgttggaagctaaaattgaaccagaagaatttaccaaagaactatatgtgga actgaagtcttcaccccagccaaatcttgttccctttctcaagaaaagtttactcgccttacggcaattaatgcctaata cagagacttttatagaacaatgtcttcagcaatctgtccctcaaacagcttcttctacttatcccactacatcatcaact tcttccacagttgctgacagcgcttttgtgactatagcctcttctcaatccgcaacatcagtccccagctctccacttca aatgtcttttccgcagacatctgtttcagtaccctgcacgactacaagtggttctgaatctcttccacttgctgagccag cttgtgccttggctgcaggggcactctcttaccaagatgacaagtccatcgtctccactcaactgattggaggaatcaat accatgaaggtcatacagccaacttccactgcaggggagacaggagcagtttctcttcaggtagcaaagccagactgtaa cccaacattaccttcaactactgttactactaattctatgaaatcagccacatctgctgtgatgacatcacttgaagtgg caaagttggtcttgactaccacagcaacctcagctgcatcagtaaacactctccagcctgtcttacctatcactgaggca gtccaacagccctctggaagcatcttaagaaatgtggtcaagcatcagcagggttcttctgtccctattgtgaacaagtt atgtgaaaaaagaccactgaatgcttttatccaaggctccattgtgaaacaaattaccttggcaggaaacaaaattgtgt cgcttgaagcatctcctgttcagagaaataaaataagagagaatggagcaacatccttcagggaagaagatgacattaat gatgtggcttctatggctggtgttaacttgagtgaagagcatgcgtgcatattggcaaccaattctgaagcaatcggtac tattttgtgctcttgtccagagaagctcctcctttcttcagaggcattgcagaagaggatcttaaaaaaaggtaaaaggc atgacattatggaagttaattctgatgttctgaacttgatctcccatgctacacaggagagattaagaggacttctagaa aaactaactttaattgctcaacatcgtataaggacctataaggggaatgacaagtacattttatctaatgatacgcggtc tcagcttcagtttcttgaacaattggatcaggttgagaaacggaggaaagatgaagaagaaaaagaacagttgctccggg cagccaagagccgttgcaataaagacgatccagagcagctgcgtttaaagcagaaagccaaagagatgcaacaattggaa tttgcacaaatgcagcaaagggaggctaatcgggcagccctggaagctcttgggccaagaaagaagagaccactggattc gtctagttctttttctggacttgagggattcaacagatcatctggtcttgcaaaaccatacctttggccaagaataaccc gaatttgtctcagggacttgatcttttgtctggaacaagagaaagaaacaaagcattctctaatcttatatcaagctctt ctgaaatagtggctaatctaattctgcatttcagcttatcatacattgccaaagaacaatttgtttgcactatcctgaag tcatatattacaagaaattgtaatgtcattgttgaatgtaggcatgctgcctggacacgtggaagagaaaaggcttcggg tgcctgttaagttccatgcaagatactgtattggtatataaatccgcaatattattccatgaagcgtgtgccttctaaca ttgcagttagtgaagaatgacgtgatgaatgtatttaatgacaaactagcagtttgctagtgcatagcctgcaggattca gcctttctatgtgtcctagagaaaccacctgggagccaaccaaaaagtatgcaggctttaatttcctgccttgaaagaaa gatggggaaaaaagaatccctactggcattctttgtgttaccagtcctaccagacagatctgcaagcaaactacagttgt aagagttggagaaagcaatacttgaaaagtcaaagtaattttgtagaatggttcataggacagtggcccatccattttca gcagaagatgacttcatttgcatatacatttatgtgcgtgtttttaaagtgacctacacaattcaagatgccccattgct ttctttagactatgaagtgatttcatctcttttattatgggaatgaagagaatatatgtactgattatcagggatctgct cactttatcttgcactggtgacttcaaaaattctaaaacctgacaaacagcagcagaagaaaaattttgttagggcattt gcagaacagcacaaaattctcctgagtgccataatgttgaatctaaatattaatccctcctgaatagatcaagaacatga ttatgatgatagagatcaacctgctatcatcttttgcacttgcctatgaacattactttattgtggacatgaaacaatac catatatgacatggatgtatataatggaacctgtgggaaagacagcaactggatgcctttgaaattgaaatctttatttt aaataagagtaatctatatagtttctctacatgttacaaaatggataatacatggatgggggaaacacttgataagaagt actactgaagttatattgaggtttctaatcaagtaatagtttccttattcgaaaaatggtgaactgaggtagttaaacca atgaagtaaattgtttgtgtctttgtgcatatttataaagtgggcactcttggataagaaagaatagcactttgatgatg gttcaaggctaatatgttttgtatagtaaatgcttaactttttatttaaaatgcagcatatttttcctgttttgtgtatt tagcctatgtgacaaatgtttcagatttattttacatattctattaaagtaaatattttattaattctaa |
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| Transcript ID | habu1_s2064_g07513.t2 |
| Definition | - |
>habu1_s2064_g07513.t2 gccgcttgtttcctcctcccgtccccttctggctggcggcctgggcatccccacgtgcatgcctgcgaagagggagaaaa gggtcgtcggcagcagcggcggatgcgtgaccgtgtggttctttgcgtgcgagctggggactctcctgctgctttgccgc accgccaactgcggagcttttgctcagctcccgagtacctttggcggctgctatgctgtggaatagcttggactgcgccg caagctctagtcctgcgccctacggtgcctttttcctccttcatgactactccgccggtgacggcaggagccgtcctggg gagggtcatggctcctgggcctcctgagcatgctctggatccccccgtgagcgcggctaacacgatccaggagctccggg ccgtgctgcccgctcagagaacgattccctccgcctcctgtccggtgattcccacgggcagccctgctagatttgtcctg aatcctgtgggcgccaagcttccccttagtttcgtcccatccttcgctcctcaaccccgagtactgcctgctcccgtaga aatcaaactagccccctcgactccggttcagcagctccccaagtctagcaacatgggtgggaggcagccagcccctctct cgggaggactcaaacccgcacaaacgacaatacagttgcctgctaattttcaaatcccccaaggaacgattctggtcaga agtaataccggtcaattaatgttgatatctcaacaagcattattacaaactcagagtcagacctcaaataataccagtgt aagatgctcaatacctccacctacaatcaaaattcagcctgtacagagttctggaactcaggtacttaaagtactaacgg ctcctgttaaaacgctgtcttgggcaactcattctgttacttctgctgttaagaagcctgctataattcagtctgtagca tcaccaaatattataggcttgacagcaaaatcacaagttgctggatcatcagcaaagcctcctgtttctgactctccagt gttggctttcacttcaaaaccagttgctgatacaggtgactcaagagccacccagcctatcagttatacggaaatgctgg aaaatgtgaaaaagtgcaaaaacttccttacaacactaataaaactggcatccagtggatctcaagcatctcaaacaggg cagactgtgaagaatctggttcaaagtctgttggaagctaaaattgaaccagaagaatttaccaaagaactatatgtgga actgaagtcttcaccccagccaaatcttgttccctttctcaaggtgttgcaagaaagccagaaaagtttactcgccttac ggcaattaatgcctaatacagagacttttatagaacaatgtcttcagcaatctgtccctcaaacagcttcttctacttat cccactacatcatcaacttcttccacagttgctgacagcgcttttgtgactatagcctcttctcaatccgcaacatcagt ccccagctctccacttcaaatgtcttttccgcagacatctgtttcagtaccctgcacgactacaagtggttctgaatctc ttccacttgctgagccagcttgtgccttggctgcaggggcactctcttaccaagatgacaagtccatcgtctccactcaa ctgattggaggaatcaataccatgaaggtcatacagccaacttccactgcaggggagacaggagcagtttctcttcaggt agcaaagccagactgtaacccaacattaccttcaactactgttactactaattctatgaaatcagccacatctgctgtga tgacatcacttgaagtggcaaagttggtcttgactaccacagcaacctcagctgcatcagtaaacactctccagcctgtc ttacctatcactgaggcagtccaacagccctctggaagcatcttaagaaatgtggtcaagcatcagcagggttcttctgt ccctattgtgaacaagttatgtgaaaaaagaccactgaatgcttttatccaaggctccattgtgaaacaaattaccttgg caggaaacaaaattgtgtcgcttgaagcatctcctgttcagagaaataaaataagagagaatggagcaacatccttcagg gaagaagatgacattaatgatgtggcttctatggctggtgttaacttgagtgaagagcatgcgtgcatattggcaaccaa ttctgaagcaatcggtactattttgtgctcttgtccagagaagctcctcctttcttcagaggcattgcagaagaggatct taaaaaaaggtaaaaggcatgacattatggaagttaattctgatgttctgaacttgatctcccatgctacacaggagaga ttaagaggacttctagaaaaactaactttaattgctcaacatcgtataaggacctataaggggaatgacaagtacatttt atctaatgatacgcggtctcagcttcagtttcttgaacaattggatcaggttgagaaacggaggaaagatgaagaagaaa aagaacagttgctccgggcagccaagagccgttgcaataaagacgatccagagcagctgcgtttaaagcagaaagccaaa gagatgcaacaattggaatttgcacaaatgcagcaaagggaggctaatcgggcagccctggaagctcttgggccaagaaa gaagagaccactggattcgtctagttctttttctggacttgagggattcaacagatcatctggtcttgcaaaaccatacc tttggccaagaataacccgaatttgtctcagggacttgatcttttgtctggaacaagagaaagaaacaaagcattctcta atcttatatcaagctcttctgaaatagtggctaatctaattctgcatttcagcttatcatacattgccaaagaacaattt gtttgcactatcctgaagtcatatattacaagaaattgtaatgtcattgttgaatgtaggcatgctgcctggacacgtgg aagagaaaaggcttcgggtgcctgttaagttccatgcaagatactgtattggtatataaatccgcaatattattccatga agcgtgtgccttctaacattgcagttagtgaagaatgacgtgatgaatgtatttaatgacaaactagcagtttgctagtg catagcctgcaggattcagcctttctatgtgtcctagagaaaccacctgggagccaaccaaaaagtatgcaggctttaat ttcctgccttgaaagaaagatggggaaaaaagaatccctactggcattctttgtgttaccagtcctaccagacagatctg caagcaaactacagttgtaagagttggagaaagcaatacttgaaaagtcaaagtaattttgtagaatggttcataggaca gtggcccatccattttcagcagaagatgacttcatttgcatatacatttatgtgcgtgtttttaaagtgacctacacaat tcaagatgccccattgctttctttagactatgaagtgatttcatctcttttattatgggaatgaagagaatatatgtact gattatcagggatctgctcactttatcttgcactggtgacttcaaaaattctaaaacctgacaaacagcagcagaagaaa aattttgttagggcatttgcagaacagcacaaaattctcctgagtgccataatgttgaatctaaatattaatccctcctg aatagatcaagaacatgattatgatgatagagatcaacctgctatcatcttttgcacttgcctatgaacattactttatt gtggacatgaaacaataccatatatgacatggatgtatataatggaacctgtgggaaagacagcaactggatgcctttga aattgaaatctttattttaaataagagtaatctatatagtttctctacatgttacaaaatggataatacatggatggggg aaacacttgataagaagtactactgaagttatattgaggtttctaatcaagtaatagtttccttattcgaaaaatggtga actgaggtagttaaaccaatgaagtaaattgtttgtgtctttgtgcatatttataaagtgggcactcttggataagaaag aatagcactttgatgatggttcaaggctaatatgttttgtatagtaaatgcttaactttttatttaaaatgcagcatatt tttcctgttttgtgtatttagcctatgtgacaaatgtttcagatttattttacatattctattaaagtaaatattttatt aattctaa |
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Protein
| Protein ID | habu1_s2064_g07513.t1 |
|---|---|
| Definition | - |
>habu1_s2064_g07513.t1 MRDRVVLCVRAGDSPAALPHRQLRSFCSAPEYLWRLLCCGIAWTAPQALVLRPTVPFSSFMTTPPVTAGAVLGRVMAPGP PEHALDPPVSAANTIQELRAVLPAQRTIPSASCPVIPTGSPARFVLNPVGAKLPLSFVPSFAPQPRVLPAPVEIKLAPST PVQQLPKSSNMGGRQPAPLSGGLKPAQTTIQLPANFQIPQGTILVRSNTGQLMLISQQALLQTQSQTSNNTSVRCSIPPP TIKIQPVQSSGTQVLKVLTAPVKTLSWATHSVTSAVKKPAIIQSVASPNIIGLTAKSQVAGSSAKPPVSDSPVLAFTSKP VADTGDSRATQPISYTEMLENVKKCKNFLTTLIKLASSGSQASQTGQTVKNLVQSLLEAKIEPEEFTKELYVELKSSPQP NLVPFLKKSLLALRQLMPNTETFIEQCLQQSVPQTASSTYPTTSSTSSTVADSAFVTIASSQSATSVPSSPLQMSFPQTS VSVPCTTTSGSESLPLAEPACALAAGALSYQDDKSIVSTQLIGGINTMKVIQPTSTAGETGAVSLQVAKPDCNPTLPSTT VTTNSMKSATSAVMTSLEVAKLVLTTTATSAASVNTLQPVLPITEAVQQPSGSILRNVVKHQQGSSVPIVNKLCEKRPLN AFIQGSIVKQITLAGNKIVSLEASPVQRNKIRENGATSFREEDDINDVASMAGVNLSEEHACILATNSEAIGTILCSCPE KLLLSSEALQKRILKKGKRHDIMEVNSDVLNLISHATQERLRGLLEKLTLIAQHRIRTYKGNDKYILSNDTRSQLQFLEQ LDQVEKRRKDEEEKEQLLRAAKSRCNKDDPEQLRLKQKAKEMQQLEFAQMQQREANRAALEALGPRKKRPLDSSSSFSGL EGFNRSSGLAKPYLWPRITRICLRDLIFCLEQEKETKHSLILYQALLK |
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| Protein ID | habu1_s2064_g07513.t2 |
| Definition | - |
>habu1_s2064_g07513.t2 MRDRVVLCVRAGDSPAALPHRQLRSFCSAPEYLWRLLCCGIAWTAPQALVLRPTVPFSSFMTTPPVTAGAVLGRVMAPGP PEHALDPPVSAANTIQELRAVLPAQRTIPSASCPVIPTGSPARFVLNPVGAKLPLSFVPSFAPQPRVLPAPVEIKLAPST PVQQLPKSSNMGGRQPAPLSGGLKPAQTTIQLPANFQIPQGTILVRSNTGQLMLISQQALLQTQSQTSNNTSVRCSIPPP TIKIQPVQSSGTQVLKVLTAPVKTLSWATHSVTSAVKKPAIIQSVASPNIIGLTAKSQVAGSSAKPPVSDSPVLAFTSKP VADTGDSRATQPISYTEMLENVKKCKNFLTTLIKLASSGSQASQTGQTVKNLVQSLLEAKIEPEEFTKELYVELKSSPQP NLVPFLKVLQESQKSLLALRQLMPNTETFIEQCLQQSVPQTASSTYPTTSSTSSTVADSAFVTIASSQSATSVPSSPLQM SFPQTSVSVPCTTTSGSESLPLAEPACALAAGALSYQDDKSIVSTQLIGGINTMKVIQPTSTAGETGAVSLQVAKPDCNP TLPSTTVTTNSMKSATSAVMTSLEVAKLVLTTTATSAASVNTLQPVLPITEAVQQPSGSILRNVVKHQQGSSVPIVNKLC EKRPLNAFIQGSIVKQITLAGNKIVSLEASPVQRNKIRENGATSFREEDDINDVASMAGVNLSEEHACILATNSEAIGTI LCSCPEKLLLSSEALQKRILKKGKRHDIMEVNSDVLNLISHATQERLRGLLEKLTLIAQHRIRTYKGNDKYILSNDTRSQ LQFLEQLDQVEKRRKDEEEKEQLLRAAKSRCNKDDPEQLRLKQKAKEMQQLEFAQMQQREANRAALEALGPRKKRPLDSS SSFSGLEGFNRSSGLAKPYLWPRITRICLRDLIFCLEQEKETKHSLILYQALLK |
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