Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s2064_g07515
Locus habu1_scaffold2064 : 644611 ... 688755 : -
To GenomeBrowser habu1_scaffold2064:644611..688755
Genes list of scaffold habu1_scaffold2064

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s2064_g07515.t1 1 1 DUF1510 73 168 1.6e-06 27.6 8.8e-09 2.2e-06 27.2

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 0.0
Venom grand-1 0.0
Pit, infrared sensing 0.1
Nose 0.0
Brain-1 0.0
Eye 0.0
fetal fibroblast 0.0
venom gland-2 0.0
Brain-2 0.1
Spleen 0.0
Lung 0.0
Liver 0.0
Kidney 0.1
Pancreas 0.1
Small intestine 0.0
Large intestine 0.0
Stomach 0.1
heart 0.0
ovary 0.0
cheek muscle 0.0

Transcript
Transcript IDhabu1_s2064_g07515.t1
Definition-
>habu1_s2064_g07515.t1
cacggcattaaaaaggttgagaaccactgttctatacaataaatgtcattctaacttacttatgttaccatgtgaaatta
cagccatttcttatcattgattattatagccaattagccagtagctatcaaaatggcaggttttccttaatgttctttag
gccagggcttttcaacctgtggtacgggtaccacctgtggtacattggcacctggcaggtggtacgcgaccatcctagaa
aagtggtagcgggggaggggaacgaactgaaccggtggcagcaccgcacaagcctgagcgagagatggctggagctgcag
acatgccgttgcagtgtgagtaagtcaagtctgtacatgaatctcattagaatccttctgcttaacatattaattgcttt
ttctatttattgtaacttcatgccgcagatgaaattaacaggagaagaaaggtttctcatgaatagaaaatggggagatt
ttcaagacttggcagctttgaaacagaagaaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaa
gaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaaga
agaagaagaagaagaagacattcactgtatgatattctaccgttctacttggtatgttgccaaggaaaagaagatgtcct
aataatgaattcttgaaaattcttcccattgattttatacattttttggtgttgtataatttgtctcactttccatagaa
tccatttctattatttgtttaacaatgccagaaattacaattaaacattacaaaaatgccatgatta

Protein
Protein IDhabu1_s2064_g07515.t1
Definition-
>habu1_s2064_g07515.t1
MFFRPGLFNLWYGYHLWYIGTWQVVRDHPRKVVAGEGNELNRWQHRTSLSERWLELQTCRCSVSKSSLYMNLIRILLLNI
LIAFSIYCNFMPQMKLTGEERFLMNRKWGDFQDLAALKQKKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
EEEEEEEEEDIHCMIFYRSTWYVAKEKKMS

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