Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s2069_g07564
Locus habu1_scaffold2069 : 338716 ... 378830 : +
To GenomeBrowser habu1_scaffold2069:338716..378830
Genes list of scaffold habu1_scaffold2069

Annotation by Blast2GO
Annotation GO
a-kinase anchor protein 7 isoform partial GO:0016301 GO:0016310

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s2069_g07564.t2 1 1 AKAP7_NLS 187 383 1.49939e-43 148.9 0.0 1.49939e-43 148.9
habu1_s2069_g07564.t2 1 1 2_5_RNA_ligase2 217 332 5.1e-07 29.5 1.8e-10 8.9e-07 28.7

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 0.0
Venom grand-1 0.0
Pit, infrared sensing 0.0
Nose 0.0
Brain-1 0.1
Eye 0.1
fetal fibroblast 0.0
venom gland-2 0.0
Brain-2 0.1
Spleen 0.0
Lung 0.0
Liver 0.0
Kidney 0.0
Pancreas 0.0
Small intestine 0.6
Large intestine 0.0
Stomach 0.0
heart 0.3
ovary 9.5
cheek muscle 0.2

Transcript
Transcript IDhabu1_s2069_g07564.t1
Definition-
>habu1_s2069_g07564.t1
gcttggtgcagaaagacttcatctgggtaaatcaaagggtgggtgggtgggtgggaagggcaggaaaaaagaaaaggaag
ctattaacatgggaaagcccaaaggggagagaaaaggaggtcaagatttaaaatgagacagaaattttactcagaagtaa
gcaacaaagctttcaggtctcagcaccaaaaaaatgtaggcaacaaagatggacaaagcatagtcctgctgcccaagcct
tttttcattatgtgatacaattatctaatcaaatggatcgttttattgttggcatttagtattagcaactatcctccatt
taatctcttgtagttctttacaagccttcaaaaaagatactttataagacaaacaaatttggaaacactggctataagcc
aaggttatgaatcagcaattgctgctattgagtgaggaaaatgaggaggcaaagaagctgccaaaccgcctaaatggagg
ccaacaattgttaaaaggaaatacaccatgggccaatgtaaaggctgtctccccaatggcagtacaggcccatatagaag
atatcagaggaagggtggcaacacatggcatggttcaggtacaacagaaaaaaaggaataagtctcggcacatgataggg
agcattcagcagcagtggggtgaaagagacgatccagagatctctgtagaggtacaaaaggaaaaaaatgtaccatctgt
aactgttgatgtacaacagcactggaatcacaatggaaagatatcatctgcacctgcaaggaggatacagcagaatgtaa
aaaaggagattctgtctcagtgtgtcactatgcagctagaagagaatctaggaggagaaatgtcacttgagaatatccac
tggcagttttccaatacgcctaagaatatatcttctgtgaagcagcaggcacaacatggggaagagttaatagttgctga
aatgaaacagcagcaagcagaggaaggggcacctgggatggattctaaggatgtccggcaagaggcaaaagaatccattc
taaaagaaaccctaccacagaagcttaggtggaaccaagactcaaagcagctaatactggaaaacattttacaagaagaa
caaaaagaaaataaattaaagaaaatggtcactgagaaggaactgtgtaacgagaccccaaatgcagaatcaacaggaac
attaagtgctcgtctagggaatgaaaatgaggaagattcaaaaaaagccagttcagagttcttacagaagaatgttcttg
atcaacaactacctagtttaaataaaggagcacaaaagatatttatagaagagaaggaccctggccataaagaacaaata
atctataaaaaacagaagagtcatatacctaactattttgttgcaataccaataacaaatgaccagattttagataaaat
tgaagatgtccaagaatctatatttaagcaggaacctaaactgctgaaagctctagttccaattcagacaatgcatctaa
ccattattgtagctcatctgaaaacggaagatgatataaaaagggctatttctgctctagagcacagcaaggctgaagtg
caagctctattgcagaggcaactcttcagcatgacatttcgtgggatcggccagtttaacaacaaagtgatttatgttaa
aatgtcaacagatgaacagcatatgttaagcaaaattgcaggaattgtagtgaactctttcacggaaatgaatattgatg
tctcaagcagcagagactttaaaccacacctgacatttctaaagctatccaaagctcctgcactgagacggaagggcttc
aggaaaatttgtgaaagcttgtatgtggaatctaaagatattccttttggcacagagctcttaagtcgaattgatctctg
tgccatgcataaaaaaaagcaagattctgggtactatcactgtgaatattcaattaatatatggcccataaattctgaag
gtaatagaaatgcagagcagcagtctgatgccctgacagaaaagtgaagcaggtgttccttgaaattatggtgcatataa
agaaattgaaacggcgcatggagacaattatcttgctgctcaaagaaattgtaatgaagctagaaaacatgacgaagtga
agatatgaaaacacagaagctacagccaagagtgacactactattaaatggaaaggtatcctctaaactcatgccagaaa
gcaacccatgaagatcaagaaaaaaaagaaagggcacgtagcaatttggagaaaattgtagcaaatggaaaagtttttcc
taatatagtgtttcacgaatgatggtagaaataaaattgctgctggaaacatcaatcaaccaatgattgttaaggtattt
ttcagttctgatttgagagaaaaagataattgtttcagcaatattgtctttagtacaaatattgatgaaggaagcagaaa
acaatgaacatcacataagaataagaggaataagcaaatgatagaaatatatgattgcctgcttggctttacgttttgat
atctttaactgaagtattttattaaagcattattaccctgcaagattactttttcagcactgaattagtgggatggctta
tatgaaatgtatacagcacttcataagaaaatagcttcagtgtagaatgatcttatctgggaattaaagaaataaaattt
gaatgtaatacttagcta
Transcript IDhabu1_s2069_g07564.t2
Definition-
>habu1_s2069_g07564.t2
agatcaaatcttccaattaggagacaaaaagattacttgtctcagcaccaaaaaaatgtaggcaacaaagatggacaaag
catagtcctgctgcccaagccttttttcattatgtgatacaattatctaatcaaatggatcgttttattgttggcattta
gtattagcaactatcctccatttaatctcttgtagttctttacaagccttcaaaaaagatactttataagacaaacaaat
ttggaaacactggctataagccaaggttatgaatcagcaattgctgctattgagtgaggaaaatgaggaggcaaagaagc
tgccaaaccgcctaaatggaggccaacaattgttaaaaggaaatacaccatgggccaatgtaaaggctgtctccccaatg
gcagtacaggcccatatagaagatatcagaggaagggtggcaacacatggcatggttcaggtacaacagaaaaaaaggaa
taagtctcggcacatgatagggagcattcagcagcagtggggtgaaagagacgatccagagatctctgtagaggtacaaa
aggaaaaaaatgtaccatctgtaactgttgatgtacaacagcactggaatcacaatggaaagatatcatctgcacctgca
aggaggatacagcagaatgtaaaaaaggagattctgtctcagtgtgtcactatgcagctagaagagaatctaggaggaga
aatgtcacttgagaatatccactggcagttttccaatacgcctaagaatatatcttctgtgaagcagcaggcacaacatg
gggaagagttaatagttgctgaaatgaaacagcagcaagcagaggaaggggcacctgggatggattctaaggatgtccgg
caagaggcaaaagaatccattctaaaagaaaccctaccacagaagcttaggtggaaccaagactcaaagcagctaatact
ggaaaacattttacaagaagaacaaaaagaaaataaattaaagaaaatggtcactgagaaggaactgtgtaacgagaccc
caaatgcagaatcaacaggaacattaagtgctcgtctagggaatgaaaatgaggaagattcaaaaaaagccagttcagag
ttcttacagaagaatgttcttgatcaacaactacctagtttaaataaaggagcacaaaagatatttatagaagagaagga
ccctggccataaagaacaaataatctataaaaaacagaagagtcatatacctaactattttgttgcaataccaataacaa
atgaccagattttagataaaattgaagatgtccaagaatctatatttaagcaggaacctaaactgctgaaagctctagtt
ccaattcagacaatgcatctaaccattattgtagctcatctgaaaacggaagatgatataaaaagggctatttctgctct
agagcacagcaaggctgaagtgcaagctctattgcagaggcaactcttcagcatgacatttcgtgggatcggccagttta
acaacaaagtgatttatgttaaaatgtcaacagatgaacagcatatgttaagcaaaattgcaggaattgtagtgaactct
ttcacggaaatgaatattgatgtctcaagcagcagagactttaaaccacacctgacatttctaaagctatccaaagctcc
tgcactgagacggaagggcttcaggaaaatttgtgaaagcttgtatgtggaatctaaagatattccttttggcacagagc
tcttaagtcgaattgatctctgtgccatgcataaaaaaaagcaagattctgggtactatcactgtgaatattcaattaat
atatggcccataaattctgaaggtaatagaaatgcagagcagcagtctgatgccctgacagaaaagtgaagcaggtgttc
cttgaaattatggtgcatataaagaaattgaaacggcgcatggagacaattatcttgctgctcaaagaaattgtaatgaa
gctagaaaacatgacgaagtgaagatatgaaaacacagaagctacagccaagagtgacactactattaaatggaaaggta
tcctctaaactcatgccagaaagcaacccatgaagatcaagaaaaaaaagaaagggcacgtagcaatttggagaaaattg
tagcaaatggaaaagtttttcctaatatagtgtttcacgaatgatggtagaaataaaattgctgctggaaacatcaatca
accaatgattgttaaggtatttttcagttctgatttgagagaaaaagataattgtttcagcaatattgtctttagtacaa
atattgatgaaggaagcagaaaacaatgaacatcacataagaataagaggaataagcaaatgatagaaatatatgattgc
ctgcttggctttacgttttgatatctttaactgaagtattttattaaagcattattaccctgcaagattactttttcagc
actgaattagtgggatggcttatatgaaatgtatacagcacttcataagaaaatagcttcagtgtagaatgatcttatct
gggaattaaagaaataaaatttgaatgtaatacttagcta

Protein
Protein IDhabu1_s2069_g07564.t1
Definition-
>habu1_s2069_g07564.t1
MQLEENLGGEMSLENIHWQFSNTPKNISSVKQQAQHGEELIVAEMKQQQAEEGAPGMDSKDVRQEAKESILKETLPQKLR
WNQDSKQLILENILQEEQKENKLKKMVTEKELCNETPNAESTGTLSARLGNENEEDSKKASSEFLQKNVLDQQLPSLNKG
AQKIFIEEKDPGHKEQIIYKKQKSHIPNYFVAIPITNDQILDKIEDVQESIFKQEPKLLKALVPIQTMHLTIIVAHLKTE
DDIKRAISALEHSKAEVQALLQRQLFSMTFRGIGQFNNKVIYVKMSTDEQHMLSKIAGIVVNSFTEMNIDVSSSRDFKPH
LTFLKLSKAPALRRKGFRKICESLYVESKDIPFGTELLSRIDLCAMHKKKQDSGYYHCEYSINIWPINSEGNRNAEQQSD
ALTEK
Protein IDhabu1_s2069_g07564.t2
Definition-
>habu1_s2069_g07564.t2
MQLEENLGGEMSLENIHWQFSNTPKNISSVKQQAQHGEELIVAEMKQQQAEEGAPGMDSKDVRQEAKESILKETLPQKLR
WNQDSKQLILENILQEEQKENKLKKMVTEKELCNETPNAESTGTLSARLGNENEEDSKKASSEFLQKNVLDQQLPSLNKG
AQKIFIEEKDPGHKEQIIYKKQKSHIPNYFVAIPITNDQILDKIEDVQESIFKQEPKLLKALVPIQTMHLTIIVAHLKTE
DDIKRAISALEHSKAEVQALLQRQLFSMTFRGIGQFNNKVIYVKMSTDEQHMLSKIAGIVVNSFTEMNIDVSSSRDFKPH
LTFLKLSKAPALRRKGFRKICESLYVESKDIPFGTELLSRIDLCAMHKKKQDSGYYHCEYSINIWPINSEGNRNAEQQSD
ALTEK

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