Gene
| Gene Model ID | habu1_s213_g01182 |
|---|---|
| Locus | habu1_scaffold213 : 40332 ... 67685 : - |
| To GenomeBrowser | habu1_scaffold213:40332..67685 |
| Genes list of scaffold | habu1_scaffold213 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| fanconi anemia group i protein | GO:0006281 GO:0016020 GO:0031398 GO:0070182 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s213_g01182.t1 | 1 | 1 | FANCI_S1-cap | 1 | 53 | 4.5e-18 | 65.0 | 3.5e-21 | 7.3e-18 | 64.3 |
| habu1_s213_g01182.t1 | 1 | 1 | FANCI_S1 | 62 | 282 | 0.0 | 256.0 | 0.0 | 0.0 | 256.0 |
| habu1_s213_g01182.t1 | 1 | 1 | FANCI_HD1 | 286 | 373 | 4.3e-32 | 109.6 | 1.0e-34 | 2.2e-31 | 107.4 |
| habu1_s213_g01182.t1 | 1 | 1 | FANCI_S2 | 379 | 543 | 0.0 | 177.3 | 0.0 | 0.0 | 176.4 |
| habu1_s213_g01182.t1 | 1 | 1 | FANCI_HD2 | 557 | 792 | 0.0 | 328.6 | 0.0 | 0.0 | 327.5 |
| habu1_s213_g01182.t1 | 1 | 1 | FANCI_S3 | 809 | 1036 | 0.0 | 274.4 | 0.0 | 0.0 | 272.0 |
| habu1_s213_g01182.t1 | 1 | 1 | FANCI_S4 | 1047 | 1303 | 0.0 | 330.6 | 0.0 | 0.0 | 330.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s213_g01182.t1 | gi|602654945|ref|XP_007433254.1| | PREDICTED: Fanconi anemia group I protein [Python bivittatus] | 0.0 |
| habu1_s213_g01182.t1 | gi|637351203|ref|XP_008118382.1| | PREDICTED: Fanconi anemia group I protein [Anolis carolinensis] | 0.0 |
| habu1_s213_g01182.t1 | gi|558231429|ref|XP_006139350.1| | PREDICTED: Fanconi anemia group I protein [Pelodiscus sinensis] | 0.0 |
| habu1_s213_g01182.t1 | gi|591371193|ref|XP_007060412.1| | PREDICTED: Fanconi anemia group I protein [Chelonia mydas] | 0.0 |
| habu1_s213_g01182.t1 | gi|530606510|ref|XP_005294955.1| | PREDICTED: Fanconi anemia group I protein [Chrysemys picta bellii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 1.4 |
| Venom grand-1 | 0.2 |
| Pit, infrared sensing | 1.3 |
| Nose | 0.8 |
| Brain-1 | 0.4 |
| Eye | 0.5 |
| fetal fibroblast | 11.0 |
| venom gland-2 | 0.5 |
| Brain-2 | 0.7 |
| Spleen | 1.2 |
| Lung | 0.6 |
| Liver | 0.8 |
| Kidney | 1.0 |
| Pancreas | 2.4 |
| Small intestine | 0.6 |
| Large intestine | 0.9 |
| Stomach | 0.4 |
| heart | 0.6 |
| ovary | 7.7 |
| cheek muscle | 0.5 |
Transcript
| Transcript ID | habu1_s213_g01182.t1 |
|---|---|
| Definition | - |
>habu1_s213_g01182.t1 ggccccagccaataaagctgaggcaacgggggccgcggagggtcagatactagaatagaatagaatagaattaaacagat tgttgaatagaattgaattaaacagattgtagattataatagactagactagactagaaataaacagattatagactaga atagaatagaacatggaatggagaataaaatagaaaatagaataatagaatagaatagaattaaacagattgtagaatag aatagaatagaaataaacagattatagaatagaatagaataaaatatggaatggagaatagaatagaataaagaatagaa tagaatagaatagacagattgtagaatagaatagaatagaatagaatagaacagaacagaacagaacagaacagaacaga acagaatctttattctcactttgaatgttatgggcttccccagaaaggacaggctttccttaacccagaaagcaaaacaa atgaaggaaacctggtttttttttttttttgtctttcagtaaacctcccttattcgtgaatattctgccacgatggacca gaaaatcctgcttctggcatcagagggaaactcagagcgcctccagtcctgcctgcagagcctgaacgaaaaagagttga atgaccttgttacgaaacacgctttgaggaagaaggggattggtgctgttctgagaggaatcttcaaaggttcgccttgc tctcaacagaaaggtgttgtcagaagactaagtatttacaaacattgtattgagttagtggaatctggtgacctgcaagt ggaaattgcatctgaaataataagactgcttatgttagaggctcacaagatgccagggcttactttggctgacttggcta tgttgttcattgaagcaattaaaggaggcagcctgttgagtggcaaatctttggaactctttcctacacttcttactttg ctggctacatctaaagagacccttgaatatggggcaggtgagctgactggggacgaatataagaaacagctgattaatac cctctgctccagcagatggagtcctcagtatgtgatccatttaacttccatgttcagggacgttccattgagtaaagaag aattgcaatttgtggtagaaaaggtcttaagaatgttctccaagctaggtctccaggaaatcccacctttggtttatcag ctgttgctgctttcttcaaagggtggcaagaaaaacatcttggaagggattgtcaactttttcaaccagatggataaaaa gcagaaagaagagcagagagattcagaatcagtggaacttgaagaagctacagtgcctttagaacaactccgccatgtgg aaggcaccgtcattctgcatattgtactagctataaatctggaccacgatctaggaaaggagctaataaaatacttaaag acagagcagcaaggggatcctagcaaagccctgtgccccttcagtgtgactattctgctttcaatggccagaatacatcg atttaaagaacagatatttgactttctgaaaacatcagttatgaaaactttcaaggacaaacagtttcttcagggctcca ggtttctacaggatttagctcctctacagtatgatatttctgatatgtttttggaagttgtagcgaacagcgtgtttggt tgggatcatgtgacccaaggtctagtagaacttggatttatccttatggactcttatgggccaaaaagactttttggaaa taaaaccacagaaagtaaccatattctgcccaaaactccagcccagcaggtgtgtaaattgggagctgatatcctcttgg aaactttcaaggtccatgaactgatcagaagtgaaattctagagcagatcctgaacagagtgatcacaaatgcaggcctt cccatcacccacttcatagaacttttgtccagtattattctgtctgctcctcttgtccttcagaattcttcctctaatgt cacagaagcttttgagcatttgtcattccttcctctcgacacagttcaagggtttctcaaggctgtacagcctctgctca aaataagcatgtccttgagggattcgttgatccttgttcttcgcaaatccatgttctctggacagctagatgcccgcaag tcagcagttgctggatttttgctgctcttgaaaaattttaaggttctgggaagcttgacctcttcccaatgcagccaagc cattggagccagtcaggtccaggtagatgtccacgcccgctataacgcggcagccaatgaggccttctgcttagagatcc taggcagcctgaggcgatgcctgagccagcaggctgatgttagactcaccctctacgagggttttaatgacgtcctgcgc aggaactctcaactgagtcattccatcctggacatgcttctctcgcagataaggcaatattatgaggctgaaccagacct gctgcccccgttaaaattagagagatgcatcctggctcaaagagatcaaatcttcttgcaggaacctttggctcacctct tgtgctgtattcagcattgtttggcctggtataagaatgttttaaccgcgcaccagcaagctgaagaagatctggaggag gaagaggaagatagaagcttccagcaagaattggataagatgttggaatccatcacaagacgaatgatcaagagtgaact ggaagattttgagctggataaatcggcagacttctctcaatccactggagttggcttaaagaacaacatctatgccattt tagtgatgggcatctgtgaagtcttgattgagtacaactttagtacaggcaactatagtaagaacaagtttgaagatgtt ttgagcctgttcaagtgctacaccaaactttgtgaaatctcgaaagagaaagcgggaaagagcaaaatctcatcaacaaa caaaattccccgaagcttcctatcgatgggctttgtgtgtaccttacttacaagtctcttcagggactgtgcccaaaacc acgaggagagcctggctgttctccgctccagcactgagttcatgcgctatgctgtcagcgtagctttgcagaaagtccag caattggacgaggcagggcagacagatgggccagagggacagaatccaggcaagatgttccagtatctttgcaaaatcac tcgagtcctcctgtggagatacacctcgatcccaacctcagcagaagaatttgggaagaaggataaaggcaaaagcatct cattgttatgcttggaaggcctactgcggatttttaacacagtgccacaacttcatccagacaaaatctcacagttcctc caggctttggatatcgcaaatgaagacgacgaagaagcagcggaggtgaatgtcaccgagaaagctgctttccagattcg gcagtttcagagatcactaacaaacctgcttggcaacacagaagaagatttcagcagcaaggaagctcttctgttgatca acatccttgtgatgctctccaaactgatggacccttcctcatcccagtttgtgcagctgttatcctggacagtgaaactt tgcaaggaaacttgcttggaagatgctccttgttgcaaaggcttactctctctgcttttcacactgcatgctcttgttaa gagcccagtcaccctactgcgtgatcttgcccaagacatccatgctcagctgggagacatagatcaggatgttgagatgg aacatgagtgtcactttgcccttgtgaattcaaagactgcagctcctactgcttgtttgatggttttgagtcaagcagac aagatccttgaagaggtagattggctgatcaacaggatgaaaaactatttgggatccgaggcagcagaaaatgcctctca agcagtaaaccagactcaatctctagagaaagctgtcattctacagcttgggactttgctgacggcctaccacgagctgg tccaaacggccctacccacaggaagctgtgtggacacgttgcttaggagtctcagcaagatgtatgccattctcacaact cttgtgaaatattatctccaagtgtgtcgaaacacagccggagggattccgggacgatttgagaaactggttaggctgtc tggttctcacatgactcctcagtgctacgccttcatcacatacgtccagaacatccaacgtgaaaccctgacctctgcag gtgaaaaaaagaaaaaagacaaaaagggagaggaatccgctgttgtggctaaagtgttgcgggagactaaaccaattcca aacttggttttcgccatagaacagtatgagaattttctgatccatctctctaaaaaggcaaaggtcaacttaatgcaata catgaaactaagtgcctcccgggatttccgaatcaacgtatctactatagaaaatgtcctacaggaacaggatgctgagg aggagccagaccacaatgagagcgttgcgtctgcacagtcaaaccccagcagagaacccaagaagaagagacgaaaaaaa tgagagcagcactgttgcttctcaaatggctggttttgcacctttttaacatccacaaggagatcatctttttcagtcta cagcatatttaaaaaagtgtttcttcaccatatcctttgcacatggaaccttgaatgctcgcagtatcggtaacctgctg atgacctatccatggtctatcccaataaggcacattaaatttgccacttttcctttgggtc |
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Protein
| Protein ID | habu1_s213_g01182.t1 |
|---|---|
| Definition | - |
>habu1_s213_g01182.t1 MDQKILLLASEGNSERLQSCLQSLNEKELNDLVTKHALRKKGIGAVLRGIFKGSPCSQQKGVVRRLSIYKHCIELVESGD LQVEIASEIIRLLMLEAHKMPGLTLADLAMLFIEAIKGGSLLSGKSLELFPTLLTLLATSKETLEYGAGELTGDEYKKQL INTLCSSRWSPQYVIHLTSMFRDVPLSKEELQFVVEKVLRMFSKLGLQEIPPLVYQLLLLSSKGGKKNILEGIVNFFNQM DKKQKEEQRDSESVELEEATVPLEQLRHVEGTVILHIVLAINLDHDLGKELIKYLKTEQQGDPSKALCPFSVTILLSMAR IHRFKEQIFDFLKTSVMKTFKDKQFLQGSRFLQDLAPLQYDISDMFLEVVANSVFGWDHVTQGLVELGFILMDSYGPKRL FGNKTTESNHILPKTPAQQVCKLGADILLETFKVHELIRSEILEQILNRVITNAGLPITHFIELLSSIILSAPLVLQNSS SNVTEAFEHLSFLPLDTVQGFLKAVQPLLKISMSLRDSLILVLRKSMFSGQLDARKSAVAGFLLLLKNFKVLGSLTSSQC SQAIGASQVQVDVHARYNAAANEAFCLEILGSLRRCLSQQADVRLTLYEGFNDVLRRNSQLSHSILDMLLSQIRQYYEAE PDLLPPLKLERCILAQRDQIFLQEPLAHLLCCIQHCLAWYKNVLTAHQQAEEDLEEEEEDRSFQQELDKMLESITRRMIK SELEDFELDKSADFSQSTGVGLKNNIYAILVMGICEVLIEYNFSTGNYSKNKFEDVLSLFKCYTKLCEISKEKAGKSKIS STNKIPRSFLSMGFVCTLLTSLFRDCAQNHEESLAVLRSSTEFMRYAVSVALQKVQQLDEAGQTDGPEGQNPGKMFQYLC KITRVLLWRYTSIPTSAEEFGKKDKGKSISLLCLEGLLRIFNTVPQLHPDKISQFLQALDIANEDDEEAAEVNVTEKAAF QIRQFQRSLTNLLGNTEEDFSSKEALLLINILVMLSKLMDPSSSQFVQLLSWTVKLCKETCLEDAPCCKGLLSLLFTLHA LVKSPVTLLRDLAQDIHAQLGDIDQDVEMEHECHFALVNSKTAAPTACLMVLSQADKILEEVDWLINRMKNYLGSEAAEN ASQAVNQTQSLEKAVILQLGTLLTAYHELVQTALPTGSCVDTLLRSLSKMYAILTTLVKYYLQVCRNTAGGIPGRFEKLV RLSGSHMTPQCYAFITYVQNIQRETLTSAGEKKKKDKKGEESAVVAKVLRETKPIPNLVFAIEQYENFLIHLSKKAKVNL MQYMKLSASRDFRINVSTIENVLQEQDAEEEPDHNESVASAQSNPSREPKKKRRKK |
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