Gene
| Gene Model ID | habu1_s213_g01183 |
|---|---|
| Locus | habu1_scaffold213 : 73226 ... 83495 : + |
| To GenomeBrowser | habu1_scaffold213:73226..83495 |
| Genes list of scaffold | habu1_scaffold213 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| retinaldehyde-binding protein 1 | GO:0005215 GO:0005622 GO:0006810 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s213_g01183.t2 | 1 | 1 | CRAL_TRIO_N | 62 | 113 | 1.3e-09 | 38.0 | 1.4e-12 | 7.0e-09 | 35.6 |
| habu1_s213_g01183.t2 | 1 | 1 | CRAL_TRIO | 139 | 292 | 3.2e-39 | 133.9 | 1.00053e-42 | 4.9e-39 | 133.3 |
| habu1_s213_g01183.t2 | 1 | 1 | CRAL_TRIO_2 | 151 | 291 | 2.7e-11 | 43.5 | 1.0e-14 | 5.0e-11 | 42.7 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.0 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.0 |
| Nose | 0.0 |
| Brain-1 | 0.3 |
| Eye | 204.2 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.2 |
| Brain-2 | 0.3 |
| Spleen | 0.0 |
| Lung | 0.0 |
| Liver | 0.0 |
| Kidney | 0.0 |
| Pancreas | 0.0 |
| Small intestine | 0.0 |
| Large intestine | 0.0 |
| Stomach | 0.0 |
| heart | 0.0 |
| ovary | 0.1 |
| cheek muscle | 0.1 |
Transcript
| Transcript ID | habu1_s213_g01183.t1 |
|---|---|
| Definition | - |
>habu1_s213_g01183.t1 ccagaatcccatcaacgtcccttgctgtgcatttcgctgagccaaatctccttggccgctgctctgtctttgttccatcc ctctcctttggctttttgtacttttcttccatgggaatcccttccctggtttgggttgacctcattatgcagctctcctg agcaatgccccgggacggcctaatcccaacccagcgttgctagcaggatgtttgtcaggagttttcgttgattctctcca gtcccactggcttccctgcagtctgcctgtgtaaacgttcctcactcttggtttcaggatttcccacagagatcttcctc cagtatcttggcatcctttgggctagattggagtgcaaagatgacagccatgacaggcaccttcaggcctctttcggaag aggagcaggctttgcgtactaaactcgagcgactgaccaccagcgaccacggtcctgtgtttgggaagcatgagaagatc cccgcacacaccttgcagaaggctaaagatgaattgaacgagaccctagagaaacgtgagttagcagtgaaagagcttca cgaacttatccaagagagagctaaagatggagaagacatttgcaaagcagttgctgagaaaatgcaggggaaggaagatg cttttctcctccgtttcttacgtgcccgcaagtttgatatcaacagagcttacgatttggttaaaggttacgtcaacttc cgccagcagtatccagaactctttgaaaacctggtccccgaggccgtacggagtaccatcgaggctggctaccctggcat cttgtgcaacagggataaatacggtcgggtggtgctgctgttcaacatagagaactgggattatgaagaaatcacatttg atgagatcctccgtgcctactgcgtaatcttggagaagctgctggagaatgaggaaactcaaatcaatggcttctgtatc gttgaaaacttcaagggattcaccatgcagcaagcctacggcatcaagccttcggaactgaaaaaaatggtggacatgct acaggattcctttccagctcgattcaaggcgatccatttcattcaccagccttggtattttaccaccacctacaacgttg tcaaacccttcctgaagaacaagctcctggaaagggtctttgtgcacggggacgaacttgacaccttttttcaagagatc gatgctgatatattgccagctaattttggaggcaacctgcctagatacgatggcaagatggtcgccgagaagctttttgg gatctggacggacaccgaagacacaacgctctaaaaatggacgccagaggtggaagatcagcctcagcttttcttggaaa cgcagtgcagatagttctcgacgtataaccacaattaggaccaaaatttccactgctaagccaggcgggttatttgagtg agccgtaactgattttataatctttttttttttgcccttaagtgaatcacagagttgtaaagcgaatctgctttctctca ctgaccagtcagaagctgtctgggaaggtcacacaggatgatcccgtgacaccagaatgctgcaaacccatcataaatac agccagttgcacaaattttgatt |
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| Transcript ID | habu1_s213_g01183.t2 |
| Definition | - |
>habu1_s213_g01183.t2 aatgggttcagatattgcattgctgtaacgctgtttgcttggggctagattggagtgcaaagatgacagccatgacaggc accttcaggcctctttcggaagaggagcaggctttgcgtactaaactcgagcgactgaccaccagcgaccacggtcctgt gtttgggaagcatgagaagatccccgcacacaccttgcagaaggctaaagatgaattgaacgagaccctagagaaacgtg agttagcagtgaaagagcttcacgaacttatccaagagagagctaaagatggagaagacatttgcaaagcagttgctgag aaaatgcaggggaaggaagatgcttttctcctccgtttcttacgtgcccgcaagtttgatatcaacagagcttacgattt ggttaaaggttacgtcaacttccgccagcagtatccagaactctttgaaaacctggtccccgaggccgtacggagtacca tcgaggctggctaccctggcatcttgtgcaacagggataaatacggtcgggtggtgctgctgttcaacatagagaactgg gattatgaagaaatcacatttgatgagatcctccgtgcctactgcgtaatcttggagaagctgctggagaatgaggaaac tcaaatcaatggcttctgtatcgttgaaaacttcaagggattcaccatgcagcaagcctacggcatcaagccttcggaac tgaaaaaaatggtggacatgctacaggattcctttccagctcgattcaaggcgatccatttcattcaccagccttggtat tttaccaccacctacaacgttgtcaaacccttcctgaagaacaagctcctggaaagggtctttgtgcacggggacgaact tgacaccttttttcaagagatcgatgctgatatattgccagctaattttggaggcaacctgcctagatacgatggcaaga tggtcgccgagaagctttttgggatctggacggacaccgaagacacaacgctctaaaaatggacgccagaggtggaagat cagcctcagcttttcttggaaacgcagtgcagatagttctcgacgtataaccacaattaggaccaaaatttccactgcta agccaggcgggttatttgagtgagccgtaactgattttataatctttttttttttgcccttaagtgaatcacagagttgt aaagcgaatctgctttctctcactgaccagtcagaagctgtctgggaaggtcacacaggatgatcccgtgacaccagaat gctgcaaacccatcataaatacagccagttgcacaaattttgatt |
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Protein
| Protein ID | habu1_s213_g01183.t1 |
|---|---|
| Definition | - |
>habu1_s213_g01183.t1 MTAMTGTFRPLSEEEQALRTKLERLTTSDHGPVFGKHEKIPAHTLQKAKDELNETLEKRELAVKELHELIQERAKDGEDI CKAVAEKMQGKEDAFLLRFLRARKFDINRAYDLVKGYVNFRQQYPELFENLVPEAVRSTIEAGYPGILCNRDKYGRVVLL FNIENWDYEEITFDEILRAYCVILEKLLENEETQINGFCIVENFKGFTMQQAYGIKPSELKKMVDMLQDSFPARFKAIHF IHQPWYFTTTYNVVKPFLKNKLLERVFVHGDELDTFFQEIDADILPANFGGNLPRYDGKMVAEKLFGIWTDTEDTTL |
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| Protein ID | habu1_s213_g01183.t2 |
| Definition | - |
>habu1_s213_g01183.t2 MTAMTGTFRPLSEEEQALRTKLERLTTSDHGPVFGKHEKIPAHTLQKAKDELNETLEKRELAVKELHELIQERAKDGEDI CKAVAEKMQGKEDAFLLRFLRARKFDINRAYDLVKGYVNFRQQYPELFENLVPEAVRSTIEAGYPGILCNRDKYGRVVLL FNIENWDYEEITFDEILRAYCVILEKLLENEETQINGFCIVENFKGFTMQQAYGIKPSELKKMVDMLQDSFPARFKAIHF IHQPWYFTTTYNVVKPFLKNKLLERVFVHGDELDTFFQEIDADILPANFGGNLPRYDGKMVAEKLFGIWTDTEDTTL |
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