Gene
| Gene Model ID | habu1_s2183_g07865 |
|---|---|
| Locus | habu1_scaffold2183 : 1179832 ... 1607645 : - |
| To GenomeBrowser | habu1_scaffold2183:1179832..1607645 |
| Genes list of scaffold | habu1_scaffold2183 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| rho gtpase-activating protein partial | GO:0005622 GO:0007165 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2183_g07865.t1 | 1 | 1 | PH | 81 | 259 | 1.5e-11 | 44.3 | 1.2e-14 | 4.3e-11 | 42.9 |
| habu1_s2183_g07865.t1 | 1 | 1 | RhoGAP | 447 | 596 | 0.0 | 170.0 | 0.0 | 0.0 | 168.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2183_g07865.t1 | gi|695155102|ref|XP_009505448.1| | PREDICTED: rho GTPase-activating protein 15, partial [Phalacrocorax carbo] | 0.0 |
| habu1_s2183_g07865.t1 | gi|677614887|ref|XP_009069530.1| | PREDICTED: rho GTPase-activating protein 15, partial [Acanthisitta chloris] | 0.0 |
| habu1_s2183_g07865.t1 | gi|704244334|ref|XP_010145824.1| | PREDICTED: LOW QUALITY PROTEIN: rho GTPase-activating protein 15-like [Eurypyga helias] | 0.0 |
| habu1_s2183_g07865.t1 | gi|543348490|ref|XP_005519654.1| | PREDICTED: rho GTPase-activating protein 15 [Pseudopodoces humilis] | 0.0 |
| habu1_s2183_g07865.t1 | gi|637249501|ref|XP_008111093.1| | PREDICTED: rho GTPase-activating protein 15 [Anolis carolinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.7 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 1.1 |
| Nose | 1.2 |
| Brain-1 | 0.5 |
| Eye | 0.4 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.1 |
| Brain-2 | 0.7 |
| Spleen | 18.6 |
| Lung | 1.7 |
| Liver | 0.9 |
| Kidney | 1.4 |
| Pancreas | 0.3 |
| Small intestine | 1.3 |
| Large intestine | 3.7 |
| Stomach | 0.6 |
| heart | 0.8 |
| ovary | 0.3 |
| cheek muscle | 0.2 |
Transcript
| Transcript ID | habu1_s2183_g07865.t1 |
|---|---|
| Definition | - |
>habu1_s2183_g07865.t1 aagtggttttgctgtatttttctccttgactgctttgtgcttgccttagatggaacaagatgtgtagcttttagaagggg gccatttcacatttcccgctttctttttaaaaagctgaaactggagattgttggggaagatgagaaaaacagtgcacagc agaatatagatttgacatattaatcatgcagcagttagcagcttctgatctcagcgtaggaaagctacatccttcctccg aaagcacaggggctgttcagatgaggatcaaaagtcccagcaacccccatgacaggtccagccaaagcaagtctctggta ttctctgagaatctgaaagtcattgagtctctatctcgtcacagaaggaatcattcccaacataatataccacatcttga aagtactggcccattggaaaaacagataatcaaagaaggctatcttctaaaggctaaaattgcagatgaaggcaagaagc taaggaaaaactggactacttcttggattgttctcactggacgaaaaatagaattttataaggaatccaaacagccagct gtgcccaatctggaactgcccccacatgctccgcacctgcttattgtgctacaggcctcctgctgctattgccgcagcga ggcctgtcacgctgcagccaccaccagcacaaggcatatcctgccaccattgccgctgccactgcaaggcatgtcctgct gccattgccaccgccacgagggggagctgccccacgtgccccacacccgcttactgtgtcacaagaaagggaccaaacct gagtggctggacttgtgtggcgctcagattgagtggaccaaggaaaaatctagcaaaaagaatgtcttccaggtcacaac agtttcaggaaatgaggtccttcttcaatcagatattgagttcatcatattggactggttccgtgctatcagaaacacga ttgacagattgccaaaagagaagagttacatatcaaagaacaacaagctcaaaattcagagatcttctagctctgaatta ctgggtgttcatgccgacagtaaggaaccaaaaacagaaaatagaaagtctttaattttcaggctgaactacagcaagtc tgatacaaatgacagaagccaagttaagagcagattaaagaagtttatcattcgaagaccttctctgaaaactttgcaag aaaagggaatcattaaaggtggtttgtgttcatggaagtacaccttccacgagttgatcctcaactctgctttattagaa tccaggatcagaatgatctttcaatctcatgtctcaatgtaccatttcagggatatgcaacagactcagatctataaaaa taatgacacaggttattgtgttgaggaaagaaggcaaaacctggagtggaattctctaagtttctttgatattatgtttg acaagcaaactttgcttgcaaaattagatcagatttttggtgcttacctacacaatgtgtgtgaacatgatggctctact gtcccttacttcgttaaaatgtgtataaaagctgttgaggaacgaggtctggatgttgatggaatatacagagtcagcgg caatctggcaacgatacagaagttacgatttgttgtcaatcaagaagagaagctgaatttggacgacagccagtgggagg acatccacgttgtcactggagcactcaagatgtttttcagagaactgcctgagcctctgttcccatactgcttctttgaa cagtttgtggaggcaataaaaatccaagaacatgatagccaggtgaaagccataaaggaccttgtacagaaattgcccag gccaaatcatgacaccatgaaaatactctttacacatctgcaaaagatagcagccaaggagaacatgaatcttatgtcac cccagagtttaggaattgtttttggaccaactctccttcgacctgaaaaagagacaggatccatggcgatccacatgctg tatcaaaaccaattgattgagctgatgctaagtgaatacaccaagatcttcagctctgactgacagaccgagaatgttgc tgaatatgttcacatctgtcttgatacctaatatttttacatttctgtaaacatctttttgaaatatttctttttctttc tagtgacagatgcctcattttgtgaaaacttagtgatggttttgtctttacatttccaaacattgaaataaaaatatatt gtcaacatttgctt |
|
Protein
| Protein ID | habu1_s2183_g07865.t1 |
|---|---|
| Definition | - |
>habu1_s2183_g07865.t1 MQQLAASDLSVGKLHPSSESTGAVQMRIKSPSNPHDRSSQSKSLVFSENLKVIESLSRHRRNHSQHNIPHLESTGPLEKQ IIKEGYLLKAKIADEGKKLRKNWTTSWIVLTGRKIEFYKESKQPAVPNLELPPHAPHLLIVLQASCCYCRSEACHAAATT STRHILPPLPLPLQGMSCCHCHRHEGELPHVPHTRLLCHKKGTKPEWLDLCGAQIEWTKEKSSKKNVFQVTTVSGNEVLL QSDIEFIILDWFRAIRNTIDRLPKEKSYISKNNKLKIQRSSSSELLGVHADSKEPKTENRKSLIFRLNYSKSDTNDRSQV KSRLKKFIIRRPSLKTLQEKGIIKGGLCSWKYTFHELILNSALLESRIRMIFQSHVSMYHFRDMQQTQIYKNNDTGYCVE ERRQNLEWNSLSFFDIMFDKQTLLAKLDQIFGAYLHNVCEHDGSTVPYFVKMCIKAVEERGLDVDGIYRVSGNLATIQKL RFVVNQEEKLNLDDSQWEDIHVVTGALKMFFRELPEPLFPYCFFEQFVEAIKIQEHDSQVKAIKDLVQKLPRPNHDTMKI LFTHLQKIAAKENMNLMSPQSLGIVFGPTLLRPEKETGSMAIHMLYQNQLIELMLSEYTKIFSSD |
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