Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s2206_g07882
Locus habu1_scaffold2206 : 123806 ... 146639 : +
To GenomeBrowser habu1_scaffold2206:123806..146639
Genes list of scaffold habu1_scaffold2206

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s2206_g07882.t1 1 1 Glyco_tranf_2_3 62 160 3.5e-10 40.0 4.7e-13 2.3e-09 37.3
habu1_s2206_g07882.t1 1 1 Glycos_transf_2 63 177 2.1e-24 86.0 5.8e-28 2.9e-24 85.6

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s2206_g07882.t1 gi|602655045|ref|XP_007433297.1| PREDICTED: dolichyl-phosphate beta-glucosyltransferase isoform X1 [Python bivittatus] 0.0
habu1_s2206_g07882.t1 gi|602655047|ref|XP_007433298.1| PREDICTED: dolichyl-phosphate beta-glucosyltransferase isoform X2 [Python bivittatus] 0.0
habu1_s2206_g07882.t1 gi|694841309|ref|XP_009461398.1| PREDICTED: dolichyl-phosphate beta-glucosyltransferase [Nipponia nippon] 0.0
habu1_s2206_g07882.t1 gi|700392101|ref|XP_009936454.1| PREDICTED: dolichyl-phosphate beta-glucosyltransferase [Opisthocomus hoazin] 0.0
habu1_s2206_g07882.t1 gi|704163781|ref|XP_010144655.1| PREDICTED: dolichyl-phosphate beta-glucosyltransferase, partial [Buceros rhinoceros silvestris] 0.0

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 24.3
Venom grand-1 76.2
Pit, infrared sensing 28.6
Nose 30.5
Brain-1 10.7
Eye 24.7
fetal fibroblast 27.9
venom gland-2 100.0
Brain-2 7.7
Spleen 47.7
Lung 38.5
Liver 74.8
Kidney 68.9
Pancreas 124.2
Small intestine 39.1
Large intestine 30.1
Stomach 43.2
heart 17.4
ovary 27.0
cheek muscle 35.3

Transcript
Transcript IDhabu1_s2206_g07882.t1
Definition-
>habu1_s2206_g07882.t1
aagcgaaaaagcgaagtgctaaagtagctgatgatggaactggggttgctggtcgaagggatcgtgatattagtgactgc
agggctggctctgattgcggtcattgcacatataactgcaagacagtctccaagtatttatgaacatgaagatgagaact
tatttctgaatgataagaaatctgtgcctagccttcatgaccctgcaacacatgaactttctatagttgtaccttcatat
aatgaagaagaacgattaccatcaatgatgaatgaagcactagattatctagagatgagacagaagcaagatccttcatt
cacatacgagatcatagtagttgatgatggcagcacagataaaaccacaaaggttgcactgaagtacgttaagaagtacg
gtagtaacaaagtgagagtactcactctggtgaggaatcgtggaaaggggggagctgttagaaggggtgtattttattca
cgaggcaaaagaatattgatggcagatgctgatggagctacaaaatttaaagatattgaaaaagtagaaaaaggtcttga
gagtctccaaccctggcctgaaatgatggctattgcctgtggctctcgtgctcacttggagaaagattccatagcacagc
gttcatacttccgaacctttctaatgcatggattccactttctagtcaggttcctttgtgttaaggatatcagagacacg
caatgtggttttaaactcttgacccgggaggctgcttctcggacattttcagctcttcatatagaacgttgggcttttga
tgtggaacttctttacatagctcaaagctttaaaatcccaataacagagattgccgtcaactggacagaaattgaaggtt
ctaagttggttcccttctggagttggttgcagatgggcagggacctgctttttatacgacttcgatacctaacaggtgct
tggaaacttgacaccagaaaattgaattaatttattcatcaccaaagcattgctttgattaaaaaatatgatttttttca
acagt

Protein
Protein IDhabu1_s2206_g07882.t1
Definition-
>habu1_s2206_g07882.t1
MELGLLVEGIVILVTAGLALIAVIAHITARQSPSIYEHEDENLFLNDKKSVPSLHDPATHELSIVVPSYNEEERLPSMMN
EALDYLEMRQKQDPSFTYEIIVVDDGSTDKTTKVALKYVKKYGSNKVRVLTLVRNRGKGGAVRRGVFYSRGKRILMADAD
GATKFKDIEKVEKGLESLQPWPEMMAIACGSRAHLEKDSIAQRSYFRTFLMHGFHFLVRFLCVKDIRDTQCGFKLLTREA
ASRTFSALHIERWAFDVELLYIAQSFKIPITEIAVNWTEIEGSKLVPFWSWLQMGRDLLFIRLRYLTGAWKLDTRKLN

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