Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s2255_g08040
Locus habu1_scaffold2255 : 1 ... 31689 : +
To GenomeBrowser habu1_scaffold2255:1..31689
Genes list of scaffold habu1_scaffold2255

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s2255_g08040.t1 gi|723140309|ref|XP_010287044.1| PREDICTED: mucosa-associated lymphoid tissue lymphoma translocation protein 1-like [Phaethon lepturus] 0.0
habu1_s2255_g08040.t1 gi|675603376|ref|XP_008948642.1| PREDICTED: mucosa-associated lymphoid tissue lymphoma translocation protein 1-like, partial [Merops nubicus] 0.0
habu1_s2255_g08040.t1 gi|695142229|ref|XP_009513675.1| PREDICTED: mucosa-associated lymphoid tissue lymphoma translocation protein 1-like, partial [Phalacrocorax carbo] 0.0
habu1_s2255_g08040.t1 gi|706145483|ref|XP_010204869.1| PREDICTED: mucosa-associated lymphoid tissue lymphoma translocation protein 1-like, partial [Colius striatus] 0.0

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 1.4
Venom grand-1 0.4
Pit, infrared sensing 1.8
Nose 1.2
Brain-1 0.5
Eye 0.7
fetal fibroblast 0.3
venom gland-2 0.8
Brain-2 0.4
Spleen 2.7
Lung 1.5
Liver 1.8
Kidney 1.9
Pancreas 0.7
Small intestine 3.4
Large intestine 4.4
Stomach 6.2
heart 0.2
ovary 0.2
cheek muscle 4.6

Transcript
Transcript IDhabu1_s2255_g08040.t1
Definition-
>habu1_s2255_g08040.t1
atatgggaaagtgtcatcttaccaaaggcaagcaagctttggagattcgcagcagcttatctgagaagagagcgttaact
gatcctattcagcaaactgtgacctcagcagaagccctggcacgcaatctacagtgggcgaaagcacatgagctttctga
aagtatgtaccttcagtttcaatgcggggttcggatccagcttggttttgctgcagaattctccaatgtcatgatcatct
acacaagaattgtaaagaagccgcctgaaattaccgtttgcaacgcttatgtcaccgattttccctttgaattggatgtg
gatccgaaagaggccaataaaggaactcctgaggagaccggcagctatttacttttaaaagatttgcccaaacactgcct
ctacacaagaataagttcactacagaagctaaaggaagatttaacattcactgtttgtctgcattatgaatacatgggac
ttgaggacgctgtggatgaaagaaaggtttgctgtgcttgtgcaaccttcatcggcatcattggcatttaaaaaattgtc
acaaggcaaaatacacaagatgagataaccttgctttgatctggaagtcaaagacagttttaagacagactgtacatttt
atacaaattagcatgtgtacgtcttcctgacatcctctgaattttgctaattaaataatcttgcgctgaacattttagca
atccagaggaggggatctgtttcaaaaggtttgcagaactccagtggattactagtaggctaaattgcaatattctcacg
ttaatgacattcaaataggaaccggatggacagtgcatcagctggtaagcaatgtctcctccgaactcaaagcttcacag
ccttagattgtggataatgttcgctttccttctctaaaaaaaaaaagagaaatgtatacctagataaagagcagacattt
tgcatcttatgctgaagctggaggctccagggaaagggagtgggaagtaagatgaagcagtaatgaaatggcaaagagaa
gaacaaaggctcttaaagaaggtattggaggacttttatttttgtttgcattggtggttattttgctagaaacagtgact
tcctaaaacaggaaatcatcagtaaccctggaattttatgtgcattgtgaagttacagcaatccaccctgtcgtggctga
caattggtattatgaatgtacagtcatggaaaataataactaaggatagaggataaacagttgagggaaggaaaatgtgt
tctgatggagtttaatatttagggtgtctgttgtattccagcggaataaagtagacaatcttaaaagccctg

Protein
Protein IDhabu1_s2255_g08040.t1
Definition-
>habu1_s2255_g08040.t1
MGKCHLTKGKQALEIRSSLSEKRALTDPIQQTVTSAEALARNLQWAKAHELSESMYLQFQCGVRIQLGFAAEFSNVMIIY
TRIVKKPPEITVCNAYVTDFPFELDVDPKEANKGTPEETGSYLLLKDLPKHCLYTRISSLQKLKEDLTFTVCLHYEYMGL
EDAVDERKVCCACATFIGIIGI

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