Gene
| Gene Model ID | habu1_s2255_g08043 |
|---|---|
| Locus | habu1_scaffold2255 : 138936 ... 153867 : + |
| To GenomeBrowser | habu1_scaffold2255:138936..153867 |
| Genes list of scaffold | habu1_scaffold2255 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| signal peptidase complex catalytic subunit sec11c isoform x1 | GO:0006465 GO:0006508 GO:0008236 GO:0016021 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2255_g08043.t1 | 1 | 1 | Peptidase_S24 | 49 | 101 | 2.1e-11 | 43.3 | 4.5e-15 | 3.3e-11 | 42.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2255_g08043.t1 | gi|602629692|ref|XP_007421770.1| | PREDICTED: signal peptidase complex catalytic subunit SEC11C isoform X1 [Python bivittatus] | 0.0 |
| habu1_s2255_g08043.t1 | gi|327282526|ref|XP_003225993.1| | PREDICTED: signal peptidase complex catalytic subunit SEC11C [Anolis carolinensis] | 0.0 |
| habu1_s2255_g08043.t1 | gi|513228118|ref|XP_424458.4| | PREDICTED: signal peptidase complex catalytic subunit SEC11C isoform X3 [Gallus gallus] | 0.0 |
| habu1_s2255_g08043.t1 | gi|530633857|ref|XP_005303910.1| | PREDICTED: signal peptidase complex catalytic subunit SEC11C [Chrysemys picta bellii] | 0.0 |
| habu1_s2255_g08043.t1 | gi|558132154|ref|XP_006116592.1| | PREDICTED: signal peptidase complex catalytic subunit SEC11C isoform X1 [Pelodiscus sinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 21.6 |
| Venom grand-1 | 79.7 |
| Pit, infrared sensing | 25.3 |
| Nose | 60.7 |
| Brain-1 | 16.2 |
| Eye | 42.2 |
| fetal fibroblast | 67.8 |
| venom gland-2 | 404.5 |
| Brain-2 | 25.8 |
| Spleen | 53.4 |
| Lung | 27.5 |
| Liver | 48.2 |
| Kidney | 33.1 |
| Pancreas | 85.0 |
| Small intestine | 32.0 |
| Large intestine | 21.1 |
| Stomach | 29.3 |
| heart | 17.4 |
| ovary | 19.2 |
| cheek muscle | 33.2 |
Transcript
| Transcript ID | habu1_s2255_g08043.t1 |
|---|---|
| Definition | - |
>habu1_s2255_g08043.t1 acgactagaagttcaggcgtagtttgccttcccttgttgcagctctcaaaatggatatttttggagacctgcggcgaatg aacaagcgccagctctattaccaagttttaaattttgccatgatcgtgtcttcagccctaatgatatggaaaggccttat tgttatcaccgggagtgagagtccaattgtagtagtgctcagtggtagtatggaaccagccttccatagaggagacctct tgttcttgacaaatttccgagatgaccccatcagggccggagaaatagtcgttttcaaagtcgaaggaagagatattcca attgtgcacagagtgattaaagttcacgaaaaagaaaatggcaacatcaaatttttgaccaagggcgataataatgaagt tgatgacagaggtttatacaaagaaggacaaaactggctagaaaagaaagatgtcgtaggcagagcccgagggtttttgc cgtatgttggaatggtgaccataatcatgaatgattatccaaaatttaagtatgctctcttagctgtcatgggagcatat gtacttctgaaacgggaatcataaaagaaactggaattgcctcggacaacttatcagcatagttatatgaagagatacta atatatttgaaacatccccttgtctgcagataatatgtgacatgtgcaaaccatattgtatttgttttgttcctcttcat gttgcagtcttaactgtgggcagcccaattgccttcattgagtcacactgatattttttttttattatgtccatctttcc caacctggttcagctctccaaattctcagtcaaaaaagtcttttggacatcttgggtggagattacataaattgtggtct aaaaccaagttag |
|
Protein
| Protein ID | habu1_s2255_g08043.t1 |
|---|---|
| Definition | - |
>habu1_s2255_g08043.t1 MDIFGDLRRMNKRQLYYQVLNFAMIVSSALMIWKGLIVITGSESPIVVVLSGSMEPAFHRGDLLFLTNFRDDPIRAGEIV VFKVEGRDIPIVHRVIKVHEKENGNIKFLTKGDNNEVDDRGLYKEGQNWLEKKDVVGRARGFLPYVGMVTIIMNDYPKFK YALLAVMGAYVLLKRES |
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