Gene
| Gene Model ID | habu1_s2255_g08045 |
|---|---|
| Locus | habu1_scaffold2255 : 188921 ... 203625 : - |
| To GenomeBrowser | habu1_scaffold2255:188921..203625 |
| Genes list of scaffold | habu1_scaffold2255 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| retinal homeobox protein rx-b-like | GO:0006355 GO:0007420 GO:0043565 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2255_g08045.t1 | 1 | 1 | Homeobox | 146 | 202 | 1.4e-24 | 85.4 | 3.6e-28 | 2.7e-24 | 84.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2255_g08045.t1 | gi|602629708|ref|XP_007421778.1| | PREDICTED: retinal homeobox protein Rx-B-like [Python bivittatus] | 0.0 |
| habu1_s2255_g08045.t1 | gi|637342757|ref|XP_008116805.1| | PREDICTED: retinal homeobox protein Rx [Anolis carolinensis] | 0.0 |
| habu1_s2255_g08045.t1 | gi|530633853|ref|XP_005303908.1| | PREDICTED: retinal homeobox protein Rx [Chrysemys picta bellii] | 0.0 |
| habu1_s2255_g08045.t1 | gi|301614476|ref|XP_002936715.1| | PREDICTED: retinal homeobox protein Rx [Xenopus (Silurana) tropicalis] | 0.0 |
| habu1_s2255_g08045.t1 | gi|2240022|gb|AAB62323.1| | retinal homeobox 2A [Xenopus laevis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.0 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.0 |
| Nose | 0.0 |
| Brain-1 | 0.0 |
| Eye | 4.2 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.0 |
| Brain-2 | 0.0 |
| Spleen | 0.0 |
| Lung | 0.0 |
| Liver | 0.0 |
| Kidney | 0.0 |
| Pancreas | 0.0 |
| Small intestine | 0.0 |
| Large intestine | 0.0 |
| Stomach | 0.0 |
| heart | 0.0 |
| ovary | 0.0 |
| cheek muscle | 0.0 |
Transcript
| Transcript ID | habu1_s2255_g08045.t1 |
|---|---|
| Definition | - |
>habu1_s2255_g08045.t1 gcccggagccgggaagaggctggagggcaaccggtccgcagccggcgctcttcatgcacctgccgccgcaggacgcgctc ctgagcatgggcgacgccgggggtggcggcggcggcggcggcttctcgctggctgggcccctgctcaggagccccgggtc ggggggtccctcctctcggctccacagcatcgaggccatcctgggatttaccaaagaggacccccgtctgggcagcttcc aaggccaggagggcagcggcggggccaagctggggaaagaggcggccgagaagatgggcgccggaggggaaggcttctcc caaatgcccgaccaggaggcgctgaggcaggagcaggcgagccccaggacggggcgcttcggagaaacctactgtaccaa acattcggacaactgcttgaccccagagctgtctgtttgtaacagtgatggcaaactgttagatgaagagcagcccaaga agaagcacagaaggaaccgtaccaccttcaccacttatcaacttcatgagctggagcgagcctttgaaaaatcccactat cctgacgtttacagtcgagaagagctggccatgaaagtcaatctacctgaagtcagagttcaggtttggtttcagaatcg gagagcgaaatggaggcgtcaggagaagctggaaatgacctccatgaagctgcaggattcgcctatcctctcctttaacc gctctcctcaaccttctgccattgggactattgggagcaacctgcccttggaatcatggcttagcccacccatgtcgaac acagaaaaactctgtgaatgagatgggtggtacctaaatttgacaaataaataaataaaatttggtcacacagttgc |
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Protein
| Protein ID | habu1_s2255_g08045.t1 |
|---|---|
| Definition | - |
>habu1_s2255_g08045.t1 MHLPPQDALLSMGDAGGGGGGGGFSLAGPLLRSPGSGGPSSRLHSIEAILGFTKEDPRLGSFQGQEGSGGAKLGKEAAEK MGAGGEGFSQMPDQEALRQEQASPRTGRFGETYCTKHSDNCLTPELSVCNSDGKLLDEEQPKKKHRRNRTTFTTYQLHEL ERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWRRQEKLEMTSMKLQDSPILSFNRSPQPSAIGTIGSNLPLE SWLSPPMSNTEKLCE |
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