Gene
| Gene Model ID | habu1_s2255_g08050 |
|---|---|
| Locus | habu1_scaffold2255 : 591505 ... 725000 : - |
| To GenomeBrowser | habu1_scaffold2255:591505..725000 |
| Genes list of scaffold | habu1_scaffold2255 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2255_g08050.t1 | 6 | 1 | PDZ | 218 | 298 | 0.0 | 268.7 | 9.4e-20 | 7.0e-16 | 58.1 |
| habu1_s2255_g08050.t1 | 2 | 1 | PDZ_2 | 227 | 302 | 8.5e-21 | 73.6 | 4.0e-07 | 0.003 | 17.4 |
| habu1_s2255_g08050.t1 | 6 | 2 | PDZ | 476 | 559 | 0.0 | 268.7 | 1.3e-22 | 9.9e-19 | 67.3 |
| habu1_s2255_g08050.t1 | 2 | 2 | PDZ_2 | 486 | 543 | 8.5e-21 | 73.6 | 1.9e-06 | 0.014 | 15.2 |
| habu1_s2255_g08050.t1 | 6 | 3 | PDZ | 641 | 699 | 0.0 | 268.7 | 5.0e-10 | 3.7e-06 | 27.0 |
| habu1_s2255_g08050.t1 | 6 | 4 | PDZ | 1040 | 1120 | 0.0 | 268.7 | 2.9e-10 | 2.1e-06 | 27.7 |
| habu1_s2255_g08050.t1 | 6 | 5 | PDZ | 2338 | 2402 | 0.0 | 268.7 | 1.2e-13 | 8.9e-10 | 38.6 |
| habu1_s2255_g08050.t1 | 6 | 6 | PDZ | 2467 | 2545 | 0.0 | 268.7 | 3.2e-17 | 2.4e-13 | 50.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2255_g08050.t1 | gi|602650364|ref|XP_007431577.1| | PREDICTED: PDZ domain-containing protein 2-like [Python bivittatus] | 0.0 |
| habu1_s2255_g08050.t1 | gi|637342719|ref|XP_008116798.1| | PREDICTED: PDZ domain-containing protein 2 isoform X1 [Anolis carolinensis] | 0.0 |
| habu1_s2255_g08050.t1 | gi|637342732|ref|XP_008116801.1| | PREDICTED: PDZ domain-containing protein 2 isoform X2 [Anolis carolinensis] | 0.0 |
| habu1_s2255_g08050.t1 | gi|641796421|ref|XP_008161592.1| | PREDICTED: PDZ domain-containing protein 2 isoform X1 [Chrysemys picta bellii] | 0.0 |
| habu1_s2255_g08050.t1 | gi|641796423|ref|XP_008161593.1| | PREDICTED: PDZ domain-containing protein 2 isoform X2 [Chrysemys picta bellii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 4.6 |
| Venom grand-1 | 5.8 |
| Pit, infrared sensing | 2.1 |
| Nose | 1.1 |
| Brain-1 | 1.0 |
| Eye | 3.1 |
| fetal fibroblast | 0.2 |
| venom gland-2 | 12.4 |
| Brain-2 | 1.2 |
| Spleen | 0.6 |
| Lung | 6.0 |
| Liver | 0.5 |
| Kidney | 2.3 |
| Pancreas | 0.6 |
| Small intestine | 0.4 |
| Large intestine | 0.6 |
| Stomach | 0.4 |
| heart | 0.9 |
| ovary | 1.8 |
| cheek muscle | 1.9 |
Transcript
| Transcript ID | habu1_s2255_g08050.t1 |
|---|---|
| Definition | - |
>habu1_s2255_g08050.t1 gtcgaggactaaaccggtcgtaagttgaggactaaactggtcgtaagtcaaggactacccaactggtcgtaagtcgagga ctttccctgcccgggagcgccgcacatgcgtggttccaccccctgcgccggccaaggcgtagctggcaagcggcagagac agagcaggccgaccaccagctggcccagcccaagggagctgcttaaagaccaaagaccttctgaagaactagattttcac tgttatctggaaatccatgacaatgaggaggcccactgttgttctggggaaattgccagaatagagttttgcagttacct ggctgatcagtgctggaatggcggcttcatctacttgatcatgttgcgccgaatcaagcgcaaggcccctcttcctccat caaatggcaacactagtaagaacaccgaacccaaagccaggcctatctccgagcccagtgggaaaaccactcaaaatggc aaaaggacgagaaagtttggggtcattactagaactgtgcctggtggtaaggacagcaagagcatctccagaacagataa tgagaatggacattgcaccctggatgggttgcattcagaggcacccaaaacagagaatcaagcagaggatcagcttctca cagcagacttcccttttccaggagaccattaccgttcccgtctttcagatggaggcattctagacctaaactccagcgaa ttatccttacagagggaaggctgtcggatatggaagatgaccatgatgaagggaaccgacgggttgggaatccagatcac tggaggccgtggatccaagcgctccccacacgccatcataattgcccgggtggaagaaggtggatcagctcacagggatg gcaggctgaaggtgggtgatgagcttctaatgatcaatggccagtctttggttggtctgtcccatcaagatgctgtcgtt ctacttcggtcagctgaaggccttgtgtatttagtagtggcaagcagggaaggagcagaagaagatgttcttcattatcc atctacaagtttgccagacctaattagcacttgttctgctcaggatacggccccctggattgacaataaggagaatgaag caccggaagaggaggatggaaaggccccagagtcagaagtcctggaatctatgacacacatgaccgatacggacaggtcc tcagatcctacagaagaagagagttctaaagagaactgtcagagcccaactcttggaggtggtattttgaagtacaagag ccgatctcaaggggcggcaattcgcttagagtctgtgggagaagatgatgagttgacagtagaaaatggagatgtgaatt atgaactaccaatgaaatattcccggggaggcagaaagcattccttaccgcagcatttggacacaggaaccagacaggaa taccatattgttaagaaatccactcgttcgttgagtgcagctcaggttgaatatccctggcgacttacacagccatctat tatctccaacattgttctgatgaaggggcagggcaagggtcttggattcagcattgtggggggacaagattctgcccggg gtcgtatgggcatttttgtaaagacaatttttccaaatggggctgcagcagctgatggcaggttaaaagaaggagacgaa cttctagaggttaatggggaatcattgcaagggctgacgcatcaggaggcaattcaaacattcaaacaactcaagaaagg tgtggtgactctcacagtacgaaccagacttcgcagcccaagccttacgccctgcccaactcccaccttactgagccggt ccagttctcccagctccagtgccagtggagtagcctcatttcccagtggagaagatggagatacttcctcttctagtcgt aaaggacctggaccaaaggacagaatcgtcatggaagtcactctaaataaagaacctggggttggcctgggcattggtgc ttgctgcctcaccttggaaaacagccttcctggtatatatattcacagcttggctccaggatctgtggctaaaatggatg gaagattaagccgtggtgatcagatcctggaagcagattcggtcagtttgcgtcacgcagcgctgagtgaagcttatgcc attttaagtgaatgtggaccaggcccggttagccttatcgttagccgacatcctaacccaaaggtttctgagcaggagat ggatgaagccataacacgaaccacccacagagaaaacaaggacgtctcttctcctcagtcctcaggaaacctgccaaaaa gtccatctccaggcgtgaagtctaaacagacagaagcttcctcgcccctgagctggacaatgaaacgtttcttggagccg gcaagtcggcagagctccatcaattctgaaacggaactttcccaatacttcttacaagatggggcaagccaattgtccct gtcggagactacggtgactggatccagtgatgaagagcagtttcgaccgaagactaccaaagaatccagtctgtgcagtt caccagctgttggcagtagctcacctggtcctcacagcaagccaagggagacagctgttcggcatgttagtttcagcgac agccccaaagggacccagtctgctttccaaagacagagaaggattgccttttatgatggagatgtgagtgatgaggatga ctttgccaaacaagatggagtctgcttccaaagaggatcgaagtcaaaaggtcaaaggaaaggagacaatgactgtagta tttccactgcagctccttcagcgcaaaatggagataccaggcaggagagagaatctgcaacaaatgcctacagtgactta gctgccaccagctctgggaatctgaacgagagccctggggagcatacaccagacaccccttttcttcccgataaagaact tcatcatcttccagagcttcatccaggctacttgaatgtgaaggactttcgagaggaacagctagaatctaagaggtctc ctaagctagaacataaagccgtcacccgagtgaaaagcctgatgagtattgaataccatggaatcccaaggcccaagaat gaggaacatggtgcttgcagcagagccagtgggaaggtccttccatccatccagaagaatgaagctcaagagagtcccct ggagcagagccatgtggaatcaattactttatctcggaatgaaaacgagtcctttgggctggatcttgaaattcatgcca accctttgcgcgtcgtcataacaggcttgcaaccaggtggagcagctgaaagggcatccatgggaaggatggtcccgaga gatgagatcctttctatcaatggtatccccatccgtggattctcttatgaggaagcttgtcaatatgtaagacatcttcc cacctccattacactggacatccagaaagccattttgcaggcagatgaggcagttcagaaagaatcaagcaatgttattg tgatgaaagaagaaatcagctttgcatatgagaaagaacctttggaatctcctctggattgtatggcagaaaggacagga ttggtgtctgatgctaacactaaagtggtaccagcagacctctcagaaatccagtctattcaagacacttctgtggtgct attagaagagattgatgacttctctggcaaaatgaattccccagaagaaaaagatggtaactgtttattagtcaagaaca gacataccaaggagaatagttttgtgatggcagaagaagctcagccaaattctgtatcaaatataattaaaaatgatctt gtagggagagctgcaaattctgttactaatacacaagagaccttggttttttctgtcctggattccattaatgcaagcaa aattttaactgtaaaccaaagctgtctgaatacctattcaaggaattttagcagccttagtgatgaccatttgactgaaa ttgaaacaaaaagcaacactattccaaaatctatgtacgctgctgcagaagattccagttcagacacagaatccttagcc gagaatcccggagacagttcatcactcttactatctgtttgtgataatcctttggtaacccataaactagttgaatcaga tgaggagcaaatagaaatttgcagtttgaattatgaccaacattgtattcaaaaccagctggacacatctcccataaaac catctcatcatccaccaatttaccattctttgaacaactgtttgcaggcagaaagcaaaacagaaatagattcaccggaa acatcccatggaaaatttacattagaaaaaccgcgcttatcgagaaactccagtgcagaacatacggttccatcagcagc ttttcaatcttctccagatgtttctccacaaggggtagacagtttggagcaagacaggccagtctgctcttccactgaga atggctgttcaaggagtgaaggaggaaatagcctgcagaaccaagaaaatctaatggaaatatgtaaaccttctgtgcca gaaatacattcctgtccaacagaaaatatcagtagctgggaagacaacatgctaggccaagatgaactggaaaaacccca acagttgcaggtagaaaatgatttagtgatggactgtggaagcagtgtaattggtagtccttctgctgcgatggggaaag gaaccagtgctccaccccagttaagaagaacagaaagctatactatgaagactgcaatacaaaaaatagtcaacagtccc aaatctccccttttgaccaaaccaaaacatttgggcagggtctcttccgctcacaatttactaggaaagaatgaaaaagc caacactgttatctcgaaaccctcaagtaccaaaaccctgaattgtggtcagtgcaagggcttcagtattccatacagtc cctcttcttcccctaaattacatcatgaaactaaaggcagtccgcaaaagagtacggtggaaactctttcaaatagtcag caaaacaaagcagggcctaaagggaaggctcttaatattaaaaacaaatccagggctcattctgatgctcttggcactgc tcctgccaaagtcgagggcactgatcaaaaaaagataaccctccctgcccaaagttcacccaggctcctttccaagaaag gttcctcactccataacttagccacacatctggaaccgcccagcaggagtctctctatgggttctaagatatttcagcag caggaggaagatcaggcccctttactggaggctcagacatccactctgcccgtgttgaacggtgagagcagcattgtgaa aaataaagataaatccatgatcaaatcaaaatttggcagggccggaacatcaggatctcctaaagtggaaaaagaagcac aggtcaccaagtgggaggctatgaacagtgaaaaatgggggagagctagcacagatcattgtccaacaagagacagccct tctcagtcaacttcaccttctgaagccacatccaaggcttattgtccgaatgatagaaccgaaaacagagggatgaatgt gagtttgaatcatgatggattggaaatgaagccattacagtctgacaatgcagggctttttaaaaaggagtcttcttgct ttatttatccccctgctcggcaagagcagcccagtcaggaaattcagcgcactttcattgaagtgaggttatcttcctcg tcctcctcttcctcctcattaattcctgatttgcccctagagaagaaagaagatgacaataagaccattcaactcagaag cgaaacgctggattgttggcagagcactttccacaaggaagatgctctcagtgcattaaaaccggtgacaaggacctatt cagtgccagcacaattatccggtcatttacgggaagacagcagtgatagagatcaaccagcgcatcatgcccaggatatc ttaggtaatgtttcgagtgcaaacccttccgattcagagttgggcctgctgaaaattgtccacctcagtctgagcagtca ggatgcaaaagccacatctgccagcatcccaaaatcaaacagcgacaatggcagtcccattgcgcaaaaactgaaaaaag gcaggaggaattattactactatgaactcaattggccacatgaccccgtttcttctttttctgtaaagcagagaattaaa tcgtttgagaacctggctaattttgataggcctatggtcaaagccatagacctccattccacctccctcaactctaaatt gcccattggccaaagattgtccagtggcatttctgccgtttcagcgaccagcgtaaacgatgcggtccaggccctgcgac ggagcttgagttcatactgtggaagcgacgttccaacttctccaaggattaccagatcttcaaccagctcgacattaaca aacgtgccgcagaatttccccaagagcagcaaagatgatggtcacttggagaagtgtggaagacatgctttgggagaacc agttagtttaccaccatctgccaccaatgtccgaagaagcagagcctcaggtggccatattagacacgtgcccttgtctc gttccaaactccgggagctgagagctctcagcatgccagatcttgataagctctgcactgaggacttctctatggagtct caaccttcacccatcaaaactgagttgcatcttccccctgttgtgagatcctttgatgctcccattgaaaatgtttccag gctgaatgaatgttcaggattatccagtcctgggatgacaagcaggcagcattcaaaagaaaccagtccttggaatagtg gctctggaactcctggatcaacatctgatgaggaagggctacagtatgatggcagcctgaataaactgaactcggggaaa agctggtctatcagcttggatgaattgttggtttcctctctggatcagcaaaaattgcagtctgttttatcttcggtgac aacgaaaagcgatgtttcttctttgcttcaggaaatcaaagcacaagcagagagcaaggaagatatttattttgtagtct tgaataaagaggaaggttctggtctgggatttagcgtcgctggaggaatagacctggaacaaaaatcaatcatcgtccat cgggtgttttccaaaggggtggcttcccaggaggggaaaattcaccgtggtgacctaattctttctatcaatggcacttg tttggcgggttctgtccatggggatgtactcaacgcgctccatcaggccaggctccataaatatgccatcgtggtcatca aaaaggagaaagacagaggaaggaggcctcctcagagcaatgagatgcctacttctgataggccaactttggtggatgca gccacgggaagtgaagcaggtccaagtggagaactgaatggggccctttgtgttgaacttttgaagacttctgctggctt gggtttcagcctggatggtgggaaagcttcagtatctggagacagacctttgttcatcaaaagaatttttaaaggtggcg ctgctgaacaagctggaaaactggaagtgggtgatgaaattcttgcgattggaggaaaatccctgcttggactcatgcac tacgatgcgtggaacatcatcaagtctgtcccagaggggcccattcacctgctgatcaggaagcatcggccgccggaatg acggatcccgatccctgagttccacttaccttttaagcacaaccttaccagttttgtttgccagcagctggaatggtggc atctgggatgttattctactaggtcagaatggtttaatcagtcgagaagcatcaagatacatatgcaagactggtgtcaa gagtcaatatggtcaggcagctaccccatgtttagacctcattggagggcctctgggcacagtttggttctcttaattgc aatcaacttgttcactgagaagataaataaacaagaacttagcaacagcagga |
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Protein
| Protein ID | habu1_s2255_g08050.t1 |
|---|---|
| Definition | - |
>habu1_s2255_g08050.t1 MRGSTPCAGQGVAGKRQRQSRPTTSWPSPRELLKDQRPSEELDFHCYLEIHDNEEAHCCSGEIARIEFCSYLADQCWNGG FIYLIMLRRIKRKAPLPPSNGNTSKNTEPKARPISEPSGKTTQNGKRTRKFGVITRTVPGGKDSKSISRTDNENGHCTLD GLHSEAPKTENQAEDQLLTADFPFPGDHYRSRLSDGGILDLNSSELSLQREGCRIWKMTMMKGTDGLGIQITGGRGSKRS PHAIIIARVEEGGSAHRDGRLKVGDELLMINGQSLVGLSHQDAVVLLRSAEGLVYLVVASREGAEEDVLHYPSTSLPDLI STCSAQDTAPWIDNKENEAPEEEDGKAPESEVLESMTHMTDTDRSSDPTEEESSKENCQSPTLGGGILKYKSRSQGAAIR LESVGEDDELTVENGDVNYELPMKYSRGGRKHSLPQHLDTGTRQEYHIVKKSTRSLSAAQVEYPWRLTQPSIISNIVLMK GQGKGLGFSIVGGQDSARGRMGIFVKTIFPNGAAAADGRLKEGDELLEVNGESLQGLTHQEAIQTFKQLKKGVVTLTVRT RLRSPSLTPCPTPTLLSRSSSPSSSASGVASFPSGEDGDTSSSSRKGPGPKDRIVMEVTLNKEPGVGLGIGACCLTLENS LPGIYIHSLAPGSVAKMDGRLSRGDQILEADSVSLRHAALSEAYAILSECGPGPVSLIVSRHPNPKVSEQEMDEAITRTT HRENKDVSSPQSSGNLPKSPSPGVKSKQTEASSPLSWTMKRFLEPASRQSSINSETELSQYFLQDGASQLSLSETTVTGS SDEEQFRPKTTKESSLCSSPAVGSSSPGPHSKPRETAVRHVSFSDSPKGTQSAFQRQRRIAFYDGDVSDEDDFAKQDGVC FQRGSKSKGQRKGDNDCSISTAAPSAQNGDTRQERESATNAYSDLAATSSGNLNESPGEHTPDTPFLPDKELHHLPELHP GYLNVKDFREEQLESKRSPKLEHKAVTRVKSLMSIEYHGIPRPKNEEHGACSRASGKVLPSIQKNEAQESPLEQSHVESI TLSRNENESFGLDLEIHANPLRVVITGLQPGGAAERASMGRMVPRDEILSINGIPIRGFSYEEACQYVRHLPTSITLDIQ KAILQADEAVQKESSNVIVMKEEISFAYEKEPLESPLDCMAERTGLVSDANTKVVPADLSEIQSIQDTSVVLLEEIDDFS GKMNSPEEKDGNCLLVKNRHTKENSFVMAEEAQPNSVSNIIKNDLVGRAANSVTNTQETLVFSVLDSINASKILTVNQSC LNTYSRNFSSLSDDHLTEIETKSNTIPKSMYAAAEDSSSDTESLAENPGDSSSLLLSVCDNPLVTHKLVESDEEQIEICS LNYDQHCIQNQLDTSPIKPSHHPPIYHSLNNCLQAESKTEIDSPETSHGKFTLEKPRLSRNSSAEHTVPSAAFQSSPDVS PQGVDSLEQDRPVCSSTENGCSRSEGGNSLQNQENLMEICKPSVPEIHSCPTENISSWEDNMLGQDELEKPQQLQVENDL VMDCGSSVIGSPSAAMGKGTSAPPQLRRTESYTMKTAIQKIVNSPKSPLLTKPKHLGRVSSAHNLLGKNEKANTVISKPS STKTLNCGQCKGFSIPYSPSSSPKLHHETKGSPQKSTVETLSNSQQNKAGPKGKALNIKNKSRAHSDALGTAPAKVEGTD QKKITLPAQSSPRLLSKKGSSLHNLATHLEPPSRSLSMGSKIFQQQEEDQAPLLEAQTSTLPVLNGESSIVKNKDKSMIK SKFGRAGTSGSPKVEKEAQVTKWEAMNSEKWGRASTDHCPTRDSPSQSTSPSEATSKAYCPNDRTENRGMNVSLNHDGLE MKPLQSDNAGLFKKESSCFIYPPARQEQPSQEIQRTFIEVRLSSSSSSSSSLIPDLPLEKKEDDNKTIQLRSETLDCWQS TFHKEDALSALKPVTRTYSVPAQLSGHLREDSSDRDQPAHHAQDILGNVSSANPSDSELGLLKIVHLSLSSQDAKATSAS IPKSNSDNGSPIAQKLKKGRRNYYYYELNWPHDPVSSFSVKQRIKSFENLANFDRPMVKAIDLHSTSLNSKLPIGQRLSS GISAVSATSVNDAVQALRRSLSSYCGSDVPTSPRITRSSTSSTLTNVPQNFPKSSKDDGHLEKCGRHALGEPVSLPPSAT NVRRSRASGGHIRHVPLSRSKLRELRALSMPDLDKLCTEDFSMESQPSPIKTELHLPPVVRSFDAPIENVSRLNECSGLS SPGMTSRQHSKETSPWNSGSGTPGSTSDEEGLQYDGSLNKLNSGKSWSISLDELLVSSLDQQKLQSVLSSVTTKSDVSSL LQEIKAQAESKEDIYFVVLNKEEGSGLGFSVAGGIDLEQKSIIVHRVFSKGVASQEGKIHRGDLILSINGTCLAGSVHGD VLNALHQARLHKYAIVVIKKEKDRGRRPPQSNEMPTSDRPTLVDAATGSEAGPSGELNGALCVELLKTSAGLGFSLDGGK ASVSGDRPLFIKRIFKGGAAEQAGKLEVGDEILAIGGKSLLGLMHYDAWNIIKSVPEGPIHLLIRKHRPPE |
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