Gene
| Gene Model ID | habu1_s2255_g08051 |
|---|---|
| Locus | habu1_scaffold2255 : 915937 ... 941910 : - |
| To GenomeBrowser | habu1_scaffold2255:915937..941910 |
| Genes list of scaffold | habu1_scaffold2255 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| myotubularin-related protein 12 | EC:3.1.3.0 GO:0016311 GO:0016791 GO:1901998 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2255_g08051.t2 | 2 | 1 | Myotub-related | 177 | 275 | 0.0 | 209.5 | 3.9e-14 | 2.9e-10 | 39.4 |
| habu1_s2255_g08051.t2 | 2 | 2 | Myotub-related | 312 | 495 | 0.0 | 209.5 | 0.0 | 0.0 | 171.0 |
| habu1_s2255_g08051.t2 | 1 | 1 | 3-PAP | 553 | 684 | 9.2e-31 | 106.6 | 2.4e-34 | 1.8e-30 | 105.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2255_g08051.t2 | gi|530633784|ref|XP_005303899.1| | PREDICTED: myotubularin-related protein 12 isoform X1 [Chrysemys picta bellii] | 0.0 |
| habu1_s2255_g08051.t2 | gi|727006896|ref|XP_010393441.1| | PREDICTED: myotubularin-related protein 12 [Corvus cornix cornix] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 4.5 |
| Venom grand-1 | 4.7 |
| Pit, infrared sensing | 3.0 |
| Nose | 6.2 |
| Brain-1 | 2.6 |
| Eye | 3.7 |
| fetal fibroblast | 3.7 |
| venom gland-2 | 10.0 |
| Brain-2 | 2.1 |
| Spleen | 3.5 |
| Lung | 5.5 |
| Liver | 2.3 |
| Kidney | 11.5 |
| Pancreas | 3.6 |
| Small intestine | 5.3 |
| Large intestine | 3.6 |
| Stomach | 5.8 |
| heart | 1.6 |
| ovary | 226.3 |
| cheek muscle | 2.7 |
Transcript
| Transcript ID | habu1_s2255_g08051.t1 |
|---|---|
| Definition | - |
>habu1_s2255_g08051.t1 ccagggattgggaacccctgccttaggttgaattaggggtctgcagcctgttcggaaccaggctgcacaagcgatggatg cttacacgggaagctctacttgcatgagcggtgggcacatgcacccaccccttgtttaaatggagctgcacaagcacatg tgcctgcttgcacagaaccatcccctctcccaccccataccggtccgcaaacccggaaaggaagtgtatgtgaggcaacc catagaaaaagaagtggaacctcacttgttaccaggtgagctggtgctttgtgaagcgaacatggttttgaaatttgtac aagacgatggatcaaatcgtggcactttcggaaaacttatttgcacaaacttcaagatttcattccttggagaagaatcc actgtagaggatgaaccacagtttaaaaataaaatcttggaagaaaatgacgtaacacttcaatgtatagatcaacttta tggagtttatgatgagaaaaaaaaacctctaagtggtcaactgagaaaatatccagaaacaataataatctactgtaaag atcttagagtgtttcacttctgtttaagatataccaaggaagaagaagttaaaaggattgtcagtggcgtagttcatcaa acacagacccctaagctatttaaacgcttgtttctgttctcttatgcatcagctgcctcaaatgacttagagaaagagaa tcaagtagtatggtttgattctattaaagactggcgtcaagaattggagcggaccaaaggaaatctaaaatacaaagcag tgaatgccaatgaaggttataaagtctctaaaaagttgcctcgctattttgttgttccaatggctatttctgaagagagc attttgcagtatcaaggaagaggaattccagtttggtgttggtcttgccataatggcgctgctctcctcaagatgtcaac ttttgccaaagaacaagatgacaacacttcccagctgtacaaactattcttggatggaatgtataaaacaattgataagc ctccatatgaagccttgaaaattgaagacctttcaagcagccttccatctttgcaagaaatccaagttgcatatactaga tttaaacagctgtttttgatagataacagtgcagaattctgggatactgatgtaaaatggttttcactgttggaaagtac aaattggctagaaatcataaggcgatgtctgagaaaaacaatagatattattgaattgcttgaagtacagagcacaaatg ttcttcttcaagaggagaatgcttctgatctctgttgtgtgactgcctgtctggttcaagttatgatggattcatactgt agaacaaggctgggatttcagagccttattcagaaagaatggatcatgggaggacatgctttcttggatcggtgtaacca tctgaggcaaagtgataaagaagaggctccagttttcttgctcttcctggactgtgtttggcaactagttcagcaatatc aaccagcgtttgaatttaccgaaacgtatcttactgttctgtctgacagcctttacatccccatatttagcaccttcttc ttcaattctcaacatcagagagacaccactacgtttctttctttgttgtgaattgtcatcctgagtcactgacagtctgg cagcttatacatttaatgaattattattatctgaatacccatggaagttcttaaataaaggtagaagtagcatttgtatt gaatcagaataaaataaaaaatatagtcaatagat |
|
| Transcript ID | habu1_s2255_g08051.t2 |
| Definition | - |
>habu1_s2255_g08051.t2 ccagggattgggaacccctgccttaggttgaattaggggtctgcagcctgttcggaaccaggctgcacaagcgatggatg cttacacgggaagctctacttgcatgagcggtgggcacatgcacccaccccttgtttaaatggagctgcacaagcacatg tgcctgcttgcacagaaccatcccctctcccaccccataccggtccgcaaacccggaaaggaagtgtatgtgaggcaacc catagaaaaagaagtggaacctcacttgttaccaggtgagctggtgctttgtgaagcgaacatggttttgaaatttgtac aagacgatggatcaaatcgtggcactttcggaaaacttatttgcacaaacttcaagatttcattccttggagaagaatcc actgtagaggatgaaccacagtttaaaaataaaatcttggaagaaaatgacgtaacacttcaatgtatagatcaacttta tggagtttatgatgagaaaaaaaaacctctaagtggtcaactgagaaaatatccagaaacaataataatctactgtaaag atcttagagtgtttcacttctgtttaagatataccaaggaagaagaagttaaaaggattgtcagtggcgtagttcatcaa acacagacccctaagctatttaaacgcttgtttctgttctcttatgcatcagctgcctcaaatgacttagagaaagagaa tcaagtagtatggtttgattctattaaagactggcgtcaagaattggagcggaccaaaggaaatctaaaatacaaagcag tgaatgccaatgaaggttataaagtctctaaaaagttgcctcgctattttgttgttccaatggctatttctgaagagagc attttgcagtatcaaggaagaggaattccagtttggtgttggtcttgccataatggcgctgctctcctcaagatgtcaac ttttgccaaagaacaagatgacaacacttcccagctgtacaaactattcttggatggaatgtataaaacaattgataagc ctccatatgaagccttgaaaattgaagacctttcaagcagccttccatctttgcaagaaatccaagttgcatatactaga tttaaacagctgtttttgatagataacagtgcagaattctgggatactgatgtaaaatggttttcactgttggaaagtac aaattggctagaaatcataaggcgatgtctgagaaaaacaatagatattattgaattgcttgaagtacagagcacaaatg ttcttcttcaagaggagaatgcttctgatctctgttgtgtgactgcctgtctggttcaagttatgatggattcatactgt agaacaaggctgggatttcagagccttattcagaaagaatggatcatgggaggacatgctttcttggatcggtgtaacca tctgaggcaaagtgataaagaagaggctccagttttcttgctcttcctggactgtgtttggcaactagttcagcaatatc aaccagcgtttgaatttaccgaaacgtatcttactgttctgtctgacagcctttacatccccatatttagcaccttcttc ttcaattctcaacatcagagagacaccactacgtatggaggaagtcttgatacagaaggcagcaaacttaattttctttc agtatgggattggtctgtgcagtttgaacacgaaggtcaagctttgcttaacaaccctctttatgcagaaaagccaaaac tagacaaaagtcagaaaaaagcttcacgattcaagcatcagcggcaactctctttgcccctgacacaagcgaaacctcct ccaagaaggggattttttaaggaggaaacagaccaattaattaaaaacctcttgggcaaaagaatcagcaggttgataac ttcttccgatgaacttcagaatagttccagagaattctatgacagttggcacagtaagcctgttgaccttcatggactcc tcctgccatgtctggaaggaccagaaatcaaagtgtgggcacagagatatttgcgatggattcctgaagctcagctccct agtggaggcacagttgccactgccacaaaagtcttagatgtaatggaggatgtacagggtttgcagaagaaaatggacga aagacatcgtcaggctgagactcaggatgatacagaagcttctccctttatgagaaatcctgctcgtttgtcatcattat ttccctttgccttgcttcagagacattctcttaagccagttttgcctaccagcatttggaaagacttggaaggtgaagaa gatttggccaggagagatgatgagtatgttgatctaggtggtgattaatgtaatgcttcctttcaattatagatttgaac catatttctgttcagttaccggaataaaattggtttcagggaggcacataatttcctttgggttgtattctggctaaaga taattagtaaagttttaatacagaacgatttccactttgcttgagaacatggatgtattttccatagacattggggaggg ggagggttaccttattcttgattaaacaaaaacaattcttttctccagcaagaatctgttctatttattgcccccctcaa taaatgagagttttatcttcctaccc |
|
Protein
| Protein ID | habu1_s2255_g08051.t1 |
|---|---|
| Definition | - |
>habu1_s2255_g08051.t1 MELHKHMCLLAQNHPLSHPIPVRKPGKEVYVRQPIEKEVEPHLLPGELVLCEANMVLKFVQDDGSNRGTFGKLICTNFKI SFLGEESTVEDEPQFKNKILEENDVTLQCIDQLYGVYDEKKKPLSGQLRKYPETIIIYCKDLRVFHFCLRYTKEEEVKRI VSGVVHQTQTPKLFKRLFLFSYASAASNDLEKENQVVWFDSIKDWRQELERTKGNLKYKAVNANEGYKVSKKLPRYFVVP MAISEESILQYQGRGIPVWCWSCHNGAALLKMSTFAKEQDDNTSQLYKLFLDGMYKTIDKPPYEALKIEDLSSSLPSLQE IQVAYTRFKQLFLIDNSAEFWDTDVKWFSLLESTNWLEIIRRCLRKTIDIIELLEVQSTNVLLQEENASDLCCVTACLVQ VMMDSYCRTRLGFQSLIQKEWIMGGHAFLDRCNHLRQSDKEEAPVFLLFLDCVWQLVQQYQPAFEFTETYLTVLSDSLYI PIFSTFFFNSQHQRDTTTFLSLL |
|
| Protein ID | habu1_s2255_g08051.t2 |
| Definition | - |
>habu1_s2255_g08051.t2 MELHKHMCLLAQNHPLSHPIPVRKPGKEVYVRQPIEKEVEPHLLPGELVLCEANMVLKFVQDDGSNRGTFGKLICTNFKI SFLGEESTVEDEPQFKNKILEENDVTLQCIDQLYGVYDEKKKPLSGQLRKYPETIIIYCKDLRVFHFCLRYTKEEEVKRI VSGVVHQTQTPKLFKRLFLFSYASAASNDLEKENQVVWFDSIKDWRQELERTKGNLKYKAVNANEGYKVSKKLPRYFVVP MAISEESILQYQGRGIPVWCWSCHNGAALLKMSTFAKEQDDNTSQLYKLFLDGMYKTIDKPPYEALKIEDLSSSLPSLQE IQVAYTRFKQLFLIDNSAEFWDTDVKWFSLLESTNWLEIIRRCLRKTIDIIELLEVQSTNVLLQEENASDLCCVTACLVQ VMMDSYCRTRLGFQSLIQKEWIMGGHAFLDRCNHLRQSDKEEAPVFLLFLDCVWQLVQQYQPAFEFTETYLTVLSDSLYI PIFSTFFFNSQHQRDTTTYGGSLDTEGSKLNFLSVWDWSVQFEHEGQALLNNPLYAEKPKLDKSQKKASRFKHQRQLSLP LTQAKPPPRRGFFKEETDQLIKNLLGKRISRLITSSDELQNSSREFYDSWHSKPVDLHGLLLPCLEGPEIKVWAQRYLRW IPEAQLPSGGTVATATKVLDVMEDVQGLQKKMDERHRQAETQDDTEASPFMRNPARLSSLFPFALLQRHSLKPVLPTSIW KDLEGEEDLARRDDEYVDLGGD |
|