Gene
| Gene Model ID | habu1_s2255_g08052 |
|---|---|
| Locus | habu1_scaffold2255 : 951501 ... 1004202 : - |
| To GenomeBrowser | habu1_scaffold2255:951501..1004202 |
| Genes list of scaffold | habu1_scaffold2255 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| zinc finger rna-binding partial | GO:0005488 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2255_g08052.t1 | 3 | 1 | zf-C2H2_jaz | 302 | 327 | 1.5e-14 | 53.5 | 8.2e-08 | 0.00024 | 21.1 |
| habu1_s2255_g08052.t1 | 3 | 1 | zf-met | 303 | 326 | 2.6e-21 | 75.0 | 6.1e-10 | 1.8e-06 | 27.9 |
| habu1_s2255_g08052.t1 | 3 | 2 | zf-C2H2_jaz | 352 | 378 | 1.5e-14 | 53.5 | 1.4e-06 | 0.0042 | 17.1 |
| habu1_s2255_g08052.t1 | 3 | 2 | zf-met | 354 | 377 | 2.6e-21 | 75.0 | 8.2e-10 | 2.4e-06 | 27.5 |
| habu1_s2255_g08052.t1 | 3 | 3 | zf-C2H2_jaz | 548 | 574 | 1.5e-14 | 53.5 | 2.7e-08 | 8.0e-05 | 22.6 |
| habu1_s2255_g08052.t1 | 3 | 3 | zf-met | 549 | 573 | 2.6e-21 | 75.0 | 1.4e-09 | 4.1e-06 | 26.8 |
| habu1_s2255_g08052.t1 | 1 | 1 | DZF | 757 | 1003 | 0.0 | 233.1 | 0.0 | 0.0 | 232.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2255_g08052.t1 | gi|602640252|ref|XP_007426941.1| | PREDICTED: zinc finger RNA-binding protein-like, partial [Python bivittatus] | 0.0 |
| habu1_s2255_g08052.t1 | gi|690429727|ref|XP_009316710.1| | PREDICTED: zinc finger RNA-binding protein [Pygoscelis adeliae] | 0.0 |
| habu1_s2255_g08052.t1 | gi|699673210|ref|XP_009901161.1| | PREDICTED: LOW QUALITY PROTEIN: zinc finger RNA-binding protein [Picoides pubescens] | 0.0 |
| habu1_s2255_g08052.t1 | gi|541963402|ref|XP_005436990.1| | PREDICTED: zinc finger RNA-binding protein [Falco cherrug] | 0.0 |
| habu1_s2255_g08052.t1 | gi|449514141|ref|XP_002193670.2| | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 13.4 |
| Venom grand-1 | 15.9 |
| Pit, infrared sensing | 14.7 |
| Nose | 18.2 |
| Brain-1 | 20.3 |
| Eye | 17.5 |
| fetal fibroblast | 30.6 |
| venom gland-2 | 20.2 |
| Brain-2 | 15.4 |
| Spleen | 12.6 |
| Lung | 13.2 |
| Liver | 12.2 |
| Kidney | 14.1 |
| Pancreas | 16.7 |
| Small intestine | 13.3 |
| Large intestine | 11.1 |
| Stomach | 12.7 |
| heart | 11.6 |
| ovary | 27.3 |
| cheek muscle | 18.1 |
Transcript
| Transcript ID | habu1_s2255_g08052.t1 |
|---|---|
| Definition | - |
>habu1_s2255_g08052.t1 cgacagaccgagatagttttcaaccgccgccatttcggtcagcccggctccatgattcccatatgcccggtagtctcttt cacctatgtgcccagccggctgggggaagatgccaaaatggccaccggcaactacttcggattcacccacaccggggccg ctgctcaatatagccaacagccggcttcaggtgtagcttattcccatccaactacagttgcaagctacactgttcatcag gctcctgtagctgcgcatacagttactgcagcctatgccccagcagcagcaacagttgcagtagccaggcctgctccagt ggcagttgcagctgctgcaacagctgcagcctatggaggataccctacagcacatacagcaactgattatggttacacac agagacagcaggaagctcctccaccacctccaccagtcaccacacagaattaccaggactcctattcctatgttagatct actgctccagctgtagcttatgacagcaagcaatattatcagcagccaactgcaactgcagtggcagctgctgcccaacc acagccttctgtggctgaatcatactatcaaacagctccaaaggctggttacagccaaggagctactcagtacactcaag cccagcaaactcgacaggtaacagccataaagccagccactccaagtccagctactactacgttctctatatatccggta tcttccactgtgcaacctgttgctgctgcagcgactgtggttccctcatatacccaaagtgccacgtatagtacaacagc agttacatattccggtacatcctactcaggttatgaagctgcagtgtattcagctgcatcatcttactatcaacagcaac agcagcagcaaaaacaagtagcggcggcagcagctgcagccgctgcaacagctgcctggacagggaccacctttactaaa aaggcaccattccaaaataaacaactgaaaccaaaacagcctcctaaaccaccgcaaatccactattgtgatgtttgtaa aatcagctgtgctggaccacagacttataaagaacatttggaggggcagaagcataaaaaaaaagaagcagcattgaaag tatctcagaacaccaccagtaacagtgcttcttctcgtgggactcagaaccagttgcgttgtgagctgtgtgatgtgtcc tgcactggagctgatgcttatgctgctcatattcgcggagctaaacaccaaaaagtggttaagctgcatactaaacttgg caaacccattccttcaactgaaccaaatgttgtcacccagactacatcagcaacgtcatcttctaagccagcagctgtgt cttcaaatatcacaagtagcagcagcactgtgaattcttctgtgacatctttggcagtaaaaattcttactccttctgcc aatgtgctacttagtacaacatcaaacaacaaaactacaatagttccaacgaacattgctgtaaaaaagatatctacacc caaaattaactttgttggtggcaataaattacagacaacaggaagtaaaatggatgacatgaaagctgtagaaaatatca agactacccctgttgccgcagtacaaatgcaggaatctaaagcagatatctctgctgaagctgtaacttctacagctctt gctgctttgcaaagcgaggtccaacctgttggtcatgactatgtggaagaggttcgtaatgatgagggaaaagtgattcg tttccattgcaagctttgtgaatgtagctttaatgatcctaatgctaaggagatgcacttaaaaggaaggcggcatcggt tacaatataagaaaaaagtaaacccagacttacaagtagaagtgaagcctagcatccgtgcaaggaagatacaagaagaa aagatgagaaagcaaatgcagaaagaagaatattggagaaggcgtgaagaagaagaacgatggagaatggaaatgagacg ctatgaggaagacatgtactggaggaggatggaagatgaacagcatcactgggacgatcgtcgtagaatacctgatggag gatatcctcatggtcctccaggccctcttgggttacttggtgtcagaccaggaatgccaccacagccacagggaccagct ccattgcgtcgacctgactcctctgatgaccgttacgtgatgaccaaacatgcagctatctatccaactgaggaggaact ccaggcagtccaaaagatagtttctatcactgaacgtgcattgaaacttgtatcagataacatgactgataatgagaaaa acaagacaaaggaaggagatgataaaaaagaaggcaataaagacagagctttgaaaggagtcctacgagtaggagtattg gctaaaggtttgcttcttcggggggaccgaaatgtcaatcttgtcttgctctgcgctgagaaaccaactaaaactttatt gagtcgcattggtgaaagtctacccaaacaacttgccgtaatcagccctgagaaatatgaaataaaatgtgctgtacaag aagcagcaatcattttgaattcatgcgtggaaccaaaaatgcaagtgacgataactttgacatcgccagtgattcgggaa gagaacatgagggatggagatgtaacttcgggtatggtgaaagacccaccggacgtcttggacaggcaaaaatgccttga cgctctggctgctctacgccacgctaagtggttccaggctagagctaatggtctgcagtcctgtgtcattatcatacgta ttcttcgtgatctctgtcagcgagtgcccacttggtctgactttccaagctgggcaatggaattattagtagaaaaggca attagcagtgcgactggaccacaaagccctggagatgcattgcgaagagtatttgagtgtatatcttcaggaattatcct aaaaggtggtcctggtcttctcgacccttgtgaaaaagatccttttgatacactggctttaatgacagatcagcaaagag aagacattacttcaagtgcacagtttgcactgagactccttgcattccgtcagatccacaaagttctaggaatggatcct ttgccccagatgaaccagcgtttcaatattcacagcaatcgaaaaaggagaagggacagtgatggagttgatggatttga agctgaggggaaaaaagacaagaaagactacgataacttttaatcaagaagtttgtgtgtgcattgttaacacaacaagg tgaaaatggaagccatttgttgtaaaaaaaataattcttaatatctgttcaagtacaactgcccccaaaagttacaaata cttttgtgcagcattcacaccattttaaagaatgtgcagacttaattatgatagaaaaagattactaatgaaaactgtat ttcaatttttggtttgtttttagcctgcctcctttctttatataactataactctttatttctgttctttatgttaactg gtcactgtgtacttaagttgtactgtatttaatacgttgttaacgtgtttcaattgctttgtgtatttgcaaatatgttt agattttttacttacctttcacacttgtaagttgctttgtattaaaagaaatggtaaatacagctcctccttcacttaat attttagagcagaacacttttttgtaaagtggggctgcaggagtatttctccttaatgtgaagcattaacaacctcttat cctgctatttaagtgctttcagtttaatgtttctgccaattccatggcatttgtctatctagtgatataatggtgtaatt aagacagatttgtgttattctaatcaggtttgttgttagttacacattagcagtataaatgcaaactgtatgcagtatga acagcaattttagcaattgatcgaaaattgcatgattttgttttttaatagaatggctttttaaaagtattgttttaggc ttcatctctagggctttgttcagttgattttgacatagcaaggccaaaaaataattttctgaaatgttgcagaaactgta agcaagaggacagtttttcctgtttgggtagagtttggctaactatttttggagagctttataagtatggtaataatatc attagctctgaattaaaataattgtttaccatatcagtgcctgtgaaatggttcctttgctgtttttgtaccaaattata caataatttacatttaaacctaaaattgaagataacagtatctcacataaattgaagcctatgctataaaggaaaaatag cagaaaattatttgtggccataatgtatgcttacgtctccttcaaacagctaaatattatagcaatggtgtaattcagtc tacatctgcctgttgatgtatgctttggttcacaggtgtgatttgttacaacactacagttgaatacacaaataaagact aaaaatgtactaagtgat |
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Protein
| Protein ID | habu1_s2255_g08052.t1 |
|---|---|
| Definition | - |
>habu1_s2255_g08052.t1 MATGNYFGFTHTGAAAQYSQQPASGVAYSHPTTVASYTVHQAPVAAHTVTAAYAPAAATVAVARPAPVAVAAAATAAAYG GYPTAHTATDYGYTQRQQEAPPPPPPVTTQNYQDSYSYVRSTAPAVAYDSKQYYQQPTATAVAAAAQPQPSVAESYYQTA PKAGYSQGATQYTQAQQTRQVTAIKPATPSPATTTFSIYPVSSTVQPVAAAATVVPSYTQSATYSTTAVTYSGTSYSGYE AAVYSAASSYYQQQQQQQKQVAAAAAAAAATAAWTGTTFTKKAPFQNKQLKPKQPPKPPQIHYCDVCKISCAGPQTYKEH LEGQKHKKKEAALKVSQNTTSNSASSRGTQNQLRCELCDVSCTGADAYAAHIRGAKHQKVVKLHTKLGKPIPSTEPNVVT QTTSATSSSKPAAVSSNITSSSSTVNSSVTSLAVKILTPSANVLLSTTSNNKTTIVPTNIAVKKISTPKINFVGGNKLQT TGSKMDDMKAVENIKTTPVAAVQMQESKADISAEAVTSTALAALQSEVQPVGHDYVEEVRNDEGKVIRFHCKLCECSFND PNAKEMHLKGRRHRLQYKKKVNPDLQVEVKPSIRARKIQEEKMRKQMQKEEYWRRREEEERWRMEMRRYEEDMYWRRMED EQHHWDDRRRIPDGGYPHGPPGPLGLLGVRPGMPPQPQGPAPLRRPDSSDDRYVMTKHAAIYPTEEELQAVQKIVSITER ALKLVSDNMTDNEKNKTKEGDDKKEGNKDRALKGVLRVGVLAKGLLLRGDRNVNLVLLCAEKPTKTLLSRIGESLPKQLA VISPEKYEIKCAVQEAAIILNSCVEPKMQVTITLTSPVIREENMRDGDVTSGMVKDPPDVLDRQKCLDALAALRHAKWFQ ARANGLQSCVIIIRILRDLCQRVPTWSDFPSWAMELLVEKAISSATGPQSPGDALRRVFECISSGIILKGGPGLLDPCEK DPFDTLALMTDQQREDITSSAQFALRLLAFRQIHKVLGMDPLPQMNQRFNIHSNRKRRRDSDGVDGFEAEGKKDKKDYDN F |
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