Gene
Gene Model ID | habu1_s2255_g08053 |
---|---|
Locus | habu1_scaffold2255 : 1010613 ... 1019533 : + |
To GenomeBrowser | habu1_scaffold2255:1010613..1019533 |
Genes list of scaffold | habu1_scaffold2255 |
Annotation by Blast2GO
Annotation | GO |
---|---|
activated rna polymerase ii transcriptional coactivator p15 | GO:0003677 GO:0003713 GO:0005634 GO:0005667 GO:0006357 GO:0045941 |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
habu1_s2255_g08053.t1 | 1 | 1 | PC4 | 67 | 120 | 1.5e-23 | 81.7 | 6.9e-27 | 2.6e-23 | 81.0 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
habu1_s2255_g08053.t1 | gi|602640250|ref|XP_007426940.1| | PREDICTED: activated RNA polymerase II transcriptional coactivator p15 [Python bivittatus] | 0.0 |
habu1_s2255_g08053.t1 | gi|327282542|ref|XP_003226001.1| | PREDICTED: activated RNA polymerase II transcriptional coactivator p15 isoform X1 [Anolis carolinensis] | 0.0 |
habu1_s2255_g08053.t1 | gi|700401988|ref|XP_009941930.1| | PREDICTED: activated RNA polymerase II transcriptional coactivator p15 isoform X2 [Opisthocomus hoazin] | 0.0 |
habu1_s2255_g08053.t1 | gi|683940178|ref|XP_009098504.1| | PREDICTED: activated RNA polymerase II transcriptional coactivator p15 [Serinus canaria] | 0.0 |
habu1_s2255_g08053.t1 | gi|663275317|ref|XP_008496365.1| | PREDICTED: activated RNA polymerase II transcriptional coactivator p15 [Calypte anna] | 0.0 |
Expression profile
Libraries | FPKM |
---|---|
>Adult | |
Venom fang forming tissue | 114.9 |
Venom grand-1 | 209.0 |
Pit, infrared sensing | 131.7 |
Nose | 117.2 |
Brain-1 | 70.8 |
Eye | 86.4 |
fetal fibroblast | 288.1 |
venom gland-2 | 169.8 |
Brain-2 | 65.7 |
Spleen | 109.8 |
Lung | 98.2 |
Liver | 92.1 |
Kidney | 97.9 |
Pancreas | 101.6 |
Small intestine | 81.0 |
Large intestine | 103.3 |
Stomach | 104.3 |
heart | 181.9 |
ovary | 159.0 |
cheek muscle | 163.5 |
Transcript
Transcript ID | habu1_s2255_g08053.t1 |
---|---|
Definition | - |
>habu1_s2255_g08053.t1 cggagtggaaggattcgagtggaataatgcctaaatcaaaggaacttgtgtcttcaagctcatcaggcagtgattcagat gctgatacagcgcatgcaaatcatctgctgtcagaaaaaaggaaaaaacaggcagccccagaaaaacccgtaaagaaaca gaagactggtgaaagttccagaggtgcagcctcctctgtgcaaagtagcaacagagatgagaatatgtttcagattggta aaatgagatatgtcaatgttcgggattttaaaggtaaagtcctaattgatattcgagaatattggatggatcaagaaggt gaaatgaaacctggcagaaaaggcatctctctaaatccagaacagtggagccagctgaaggaacagatttctgatattga tgaagctgtaagaaaactgtaaagaagagccatacagaaactctactgttataggtttaagtagtctttttacattagca ttcgtttttctaaactatttgttttccaagctattgtatatttggattgcaaacaatttgtaagatggaatgcttttttt tattgtgcattaaaagtgtattctgagtgaagttacaaatgtgtatacttttattaaattggtgttatgttctcatatca tgatgtaaaataaaacacatttaattaatacacttg |
Protein
Protein ID | habu1_s2255_g08053.t1 |
---|---|
Definition | - |
>habu1_s2255_g08053.t1 MPKSKELVSSSSSGSDSDADTAHANHLLSEKRKKQAAPEKPVKKQKTGESSRGAASSVQSSNRDENMFQIGKMRYVNVRD FKGKVLIDIREYWMDQEGEMKPGRKGISLNPEQWSQLKEQISDIDEAVRKL |