Gene
| Gene Model ID | habu1_s2255_g08059 |
|---|---|
| Locus | habu1_scaffold2255 : 1267993 ... 1296196 : + |
| To GenomeBrowser | habu1_scaffold2255:1267993..1296196 |
| Genes list of scaffold | habu1_scaffold2255 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2255_g08059.t1 | 1 | 1 | TGS | 72 | 132 | 1.9e-16 | 59.6 | 9.9e-19 | 2.9e-15 | 55.8 |
| habu1_s2255_g08059.t1 | 1 | 1 | tRNA_SAD | 239 | 287 | 4.5e-12 | 45.6 | 3.5e-15 | 1.0e-11 | 44.5 |
| habu1_s2255_g08059.t1 | 1 | 1 | tRNA-synt_2b | 342 | 504 | 9.3887e-44 | 149.0 | 0.0 | 1.79366e-43 | 148.0 |
| habu1_s2255_g08059.t1 | 1 | 1 | HGTP_anticodon | 609 | 698 | 1.1e-19 | 70.0 | 9.3e-23 | 2.8e-19 | 68.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2255_g08059.t1 | gi|542160241|ref|XP_005488843.1| | PREDICTED: threonine--tRNA ligase, cytoplasmic [Zonotrichia albicollis] | 0.0 |
| habu1_s2255_g08059.t1 | gi|729732753|ref|XP_010562280.1| | PREDICTED: threonine--tRNA ligase, cytoplasmic [Haliaeetus leucocephalus] | 0.0 |
| habu1_s2255_g08059.t1 | gi|683933592|ref|XP_009096163.1| | PREDICTED: threonine--tRNA ligase, cytoplasmic [Serinus canaria] | 0.0 |
| habu1_s2255_g08059.t1 | gi|697850658|ref|XP_009645675.1| | PREDICTED: threonine--tRNA ligase, cytoplasmic [Egretta garzetta] | 0.0 |
| habu1_s2255_g08059.t1 | gi|727006908|ref|XP_010393447.1| | PREDICTED: threonine--tRNA ligase, cytoplasmic [Corvus cornix cornix] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 14.8 |
| Venom grand-1 | 11.1 |
| Pit, infrared sensing | 15.1 |
| Nose | 38.0 |
| Brain-1 | 5.7 |
| Eye | 11.2 |
| fetal fibroblast | 75.8 |
| venom gland-2 | 43.7 |
| Brain-2 | 6.1 |
| Spleen | 16.6 |
| Lung | 8.2 |
| Liver | 6.4 |
| Kidney | 4.5 |
| Pancreas | 12.5 |
| Small intestine | 7.0 |
| Large intestine | 10.2 |
| Stomach | 8.8 |
| heart | 8.4 |
| ovary | 30.1 |
| cheek muscle | 15.7 |
Transcript
| Transcript ID | habu1_s2255_g08059.t1 |
|---|---|
| Definition | - |
>habu1_s2255_g08059.t1 caacgcttccttgctgcttcccgggcgcgcttgaaagtggcagcggctcattctgtggacggagggatggaggcggccga gcagcagattcttgttgggaaggagaagaagaagaaagttcctggagagaagaaaaacacagaaggaactggtgacacca gtcgctctgagcttagtccatggcccgattatattaaccaacgtttggaaatgtaccataaactgaaagcagaacatgat gctcttctggcagaacgagctgctaaagaaagccaacccattaaagttacgttacctgatggcaaacaaattgatgctga atcctggaagactacaccataccaaattgcctgtggaatcagtcaaggtttggccgacaacactgtcattgctcgagtgg ataaagtggtttgggatcttgatcgtcctctagagagagattgtaccttggaattacttaagtttgatgatgatgaagct caagcagtatactggcattctagtgctcacataatgggtgaagccatggaaagaatatatggtggttgcttatgttacgg cccaccaatagagaatggattttactatgatatgttccttgatgaggggggtgtctctagcaatgaattccctgctattg aaggcttgtgcaagaaaatcatgaaagagaaacaactttttgagcgactagaaattaagaaggaaactttacttgaaatg tttaagtacaataaattcaagtgtcggatcttaaatgaaaaagtcaccactccaactacgactgtatacaggtgtggccc tttgattgatctttgtagaggtccccacgtcagacatactgggaaaataaaagccttaaaaatacataagaattcttcta cttattgggaaggaaagtctgatatggaaaccttgcaaagggtttatggtatctccttccctgatgcaaaaatgctgaaa gaatgggaaaagttccaagaagaggcaaagaaccgggatcacaggaaaattggacgggatcaagaactatttttcttcca cgaactcagtcctggtagctgtttcttccttccaaagggcgcttacatctataatacattgatagaatatatcaggagcg agtatcggaaacgaggcttccaagaagttgtgtctccaaacgtctacaacagcaagctttgggtgacctctggccattgg cagctttacagtgacaacatgttttcctttgaggtggaaaaggagatctttgctctgaagccaatgaactgtcctggaca ctgtcttatgtttgaccatcggccaagatcatggagggagctacctttgcgcctggctgactttggagttctgcaccgta acgaactgtctgggacactgaccggtctcacccgagtgaggcggttccagcaagatgatgctcacatattttgtgccatg gagcagattgaaggggagattaagagctgcctggaattcttgcgcaccgtctatgatgtctttggtttttccttcaaact tcacctctctacccgtcccgaaaagttccttggagatgttgaagtgtggaatcaagctgaaaagcaacttgaaaatagcc tgaatgagtttggtgagaaatgggaactgaaccctggagatggagctttctatgggccaaagattgatatccagatcaaa gatgccattgggaggtaccatcaatgtgccaccatccagttggacttccagctccctctgagatttaacctcacatacat gagccatgatggtaatgacaaaacaagaccggtgattatacatcgtgccatcttgggatcggtggagagaatgattgcta tcctgactgaaaactatggaggcaaatggccactctggatatctcctcagcaagtgatggtaataccagttggaccaacg tgtgatgaatatgcacaaaaggtgaagcaacagttccatgatgctggcttaatggcggatgttgatgtggaccctggttg tactctgaataagaagatcagaaatgctcagcttgcccagtacaattttattttagttgttggcgagaaagagaaggcct gtgggactgtgaatatccgtacaagggacaacaagattcacggtgaacgtacagtggctgaaacagtcgaaagactcctg cagctgaagcgtggccacagcaaaaatgctgaagaagaattttaaccaaatcctttgcttctttaactccaattagagca gtgtttctcaaccttgacaattttaaggcatgtggacttcaactcccagaattccacagccagcaatgctggctgtggaa ttctgggagttgaagtccacataccttaaaattgtcaaggttgagaaacactgaattagagctagctttctcagtctctc ctaagttagttttgaaggataaaaattttgcactatatcctctttgaaataataattttctcaaatacgttagacatgtt tataggttcagaattcaaatagagatggagttgaaaatctttgtatgatgagggagattattttgattagcaactggata aaagcttctgaaatgatatgtctaagacccagagaacaaaggcacagtgtaaagcctaatcaaggatttagatcaaacct cttcagtgtttttcttcacagaataaatttggttaaaaatgccttctga |
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Protein
| Protein ID | habu1_s2255_g08059.t1 |
|---|---|
| Definition | - |
>habu1_s2255_g08059.t1 MEAAEQQILVGKEKKKKVPGEKKNTEGTGDTSRSELSPWPDYINQRLEMYHKLKAEHDALLAERAAKESQPIKVTLPDGK QIDAESWKTTPYQIACGISQGLADNTVIARVDKVVWDLDRPLERDCTLELLKFDDDEAQAVYWHSSAHIMGEAMERIYGG CLCYGPPIENGFYYDMFLDEGGVSSNEFPAIEGLCKKIMKEKQLFERLEIKKETLLEMFKYNKFKCRILNEKVTTPTTTV YRCGPLIDLCRGPHVRHTGKIKALKIHKNSSTYWEGKSDMETLQRVYGISFPDAKMLKEWEKFQEEAKNRDHRKIGRDQE LFFFHELSPGSCFFLPKGAYIYNTLIEYIRSEYRKRGFQEVVSPNVYNSKLWVTSGHWQLYSDNMFSFEVEKEIFALKPM NCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGTLTGLTRVRRFQQDDAHIFCAMEQIEGEIKSCLEFLRTVYDVFG FSFKLHLSTRPEKFLGDVEVWNQAEKQLENSLNEFGEKWELNPGDGAFYGPKIDIQIKDAIGRYHQCATIQLDFQLPLRF NLTYMSHDGNDKTRPVIIHRAILGSVERMIAILTENYGGKWPLWISPQQVMVIPVGPTCDEYAQKVKQQFHDAGLMADVD VDPGCTLNKKIRNAQLAQYNFILVVGEKEKACGTVNIRTRDNKIHGERTVAETVERLLQLKRGHSKNAEEEF |
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