Gene
| Gene Model ID | habu1_s2279_g08228 |
|---|---|
| Locus | habu1_scaffold2279 : 78166 ... 100117 : + |
| To GenomeBrowser | habu1_scaffold2279:78166..100117 |
| Genes list of scaffold | habu1_scaffold2279 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| vesicle transport protein use1 | GO:0005783 GO:0060628 GO:0071786 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2279_g08228.t2 | 1 | 1 | Use1 | 1 | 213 | 0.0 | 283.7 | 0.0 | 0.0 | 283.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2279_g08228.t2 | gi|637379544|ref|XP_003230664.2| | PREDICTED: vesicle transport protein USE1 [Anolis carolinensis] | 0.0 |
| habu1_s2279_g08228.t2 | gi|449491657|ref|XP_002195816.2| | PREDICTED: vesicle transport protein USE1 [Taeniopygia guttata] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 1.6 |
| Venom grand-1 | 2.1 |
| Pit, infrared sensing | 1.6 |
| Nose | 1.6 |
| Brain-1 | 1.9 |
| Eye | 2.0 |
| fetal fibroblast | 4.1 |
| venom gland-2 | 2.9 |
| Brain-2 | 1.9 |
| Spleen | 1.2 |
| Lung | 1.5 |
| Liver | 1.4 |
| Kidney | 1.8 |
| Pancreas | 1.5 |
| Small intestine | 0.8 |
| Large intestine | 0.6 |
| Stomach | 1.2 |
| heart | 2.2 |
| ovary | 7.0 |
| cheek muscle | 3.3 |
Transcript
| Transcript ID | habu1_s2279_g08228.t1 |
|---|---|
| Definition | - |
>habu1_s2279_g08228.t1 agaactgaagctggtccgactgttgagccgttgtgaggcgatggcggccgataaacgaaatccggacgagtggcgattgg acaagtacgtagctgctctggaggagatgttactcacattgaagaaacactccagcaaaccagctcctgaagtactgaat gaatattctcgtaaggtggattttttaaagggcttgctagaagcagagaaattgtcatcatcttctgagaaggcgctggc aaatcagtttttggctcccgggagaactcctaccactgccaaggagcggaccccagcaacgaaaaccgtgcatctacaga ccaaggcccgctttatgggcgagatgaggaatgagctgcttggtacagacccttcctatatcagtgatttggaagagaaa aatttaaggaaacgcatgactccacttcctgacgagaagcagtcagctgccgaactggatgcggtcctgcagcatcatca caacatccaggagaagttagctgaagagatgttgcacctggcacgcaatctcaagaacaacactcttgtagcacagaatg tgattaagcaagataaccagaccttgacgcagtcactcaagctggctgaccataactttgagaaactaaagtctgaatcg gatcgcctggagcagcatgccaagaaatctgtcaactggcttctctggctaatgttgatcgttgactttttaaagggtgg catccaaagatcaagcacggatcaaatggcaaaattaaaagccattgtcagcccctcaggagattcaacttcagatgaag tcaattcagaggaaagaagagccaatactctgtcataaaatgaacatagagagaaggggctcgatatggtcaaaatggtt gatgagttgaaaaggcagggtatagcagaaaaacaataaaatggccagattgggtttctttgaataaacaaattatgaaa tttcagcagt |
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| Transcript ID | habu1_s2279_g08228.t2 |
| Definition | - |
>habu1_s2279_g08228.t2 agaactgaagctggtccgactgttgagccgttgtgaggcgatggcggccgataaacgaaatccggacgagtggcgattgg acaagtacgtagctgctctggaggagatgttactcacattgaagaaacactccagcaaaccagctcctgaagtactgaat gaatattctcgtaaggtggattttttaaagggcttgctagaagcagagaaattgtcatcatcttctgagaaggcgctggc aaatcagtttttggctcccgggagaactcctaccactgccaaggagcggaccccagcaacgaaaaccgtgcatctacaga ccaaggcccgctttatgggcgagatgaggaatgagctgcttgatttggaagagaaaaatttaaggaaacgcatgactcca cttcctgacgagaagcagtcagctgccgaactggatgcggtcctgcagcatcatcacaacatccaggagaagttagctga agagatgttgcacctggcacgcaatctcaagaacaacactcttgtagcacagaatgtgattaagcaagataaccagacct tgacgcagtcactcaagctggctgaccataactttgagaaactaaagtctgaatcggatcgcctggagcagcatgccaag aaatctgtcaactggcttctctggctaatgttgatcgttgactttttaaagggtggcatccaaagatcaagcacggatca aatggcaaaattaaaagccattgtcagcccctcaggagattcaacttcagatgaagtcaattcagaggaaagaagagcca atactctgtcataaaatgaacatagagagaaggggctcgatatggtcaaaatggttgatgagttgaaaaggcagggtata gcagaaaaacaataaaatggccagattgggtttctttgaataaacaaattatgaaatttcagcagt |
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Protein
| Protein ID | habu1_s2279_g08228.t1 |
|---|---|
| Definition | - |
>habu1_s2279_g08228.t1 MAADKRNPDEWRLDKYVAALEEMLLTLKKHSSKPAPEVLNEYSRKVDFLKGLLEAEKLSSSSEKALANQFLAPGRTPTTA KERTPATKTVHLQTKARFMGEMRNELLGTDPSYISDLEEKNLRKRMTPLPDEKQSAAELDAVLQHHHNIQEKLAEEMLHL ARNLKNNTLVAQNVIKQDNQTLTQSLKLADHNFEKLKSESDRLEQHAKKSVNWLLWLMLIVDFLKGGIQRSSTDQMAKLK AIVSPSGDSTSDEVNSEERRANTLS |
|
| Protein ID | habu1_s2279_g08228.t2 |
| Definition | - |
>habu1_s2279_g08228.t2 MAADKRNPDEWRLDKYVAALEEMLLTLKKHSSKPAPEVLNEYSRKVDFLKGLLEAEKLSSSSEKALANQFLAPGRTPTTA KERTPATKTVHLQTKARFMGEMRNELLDLEEKNLRKRMTPLPDEKQSAAELDAVLQHHHNIQEKLAEEMLHLARNLKNNT LVAQNVIKQDNQTLTQSLKLADHNFEKLKSESDRLEQHAKKSVNWLLWLMLIVDFLKGGIQRSSTDQMAKLKAIVSPSGD STSDEVNSEERRANTLS |
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