Gene
Gene Model ID | habu1_s2279_g08232 |
---|---|
Locus | habu1_scaffold2279 : 355645 ... 363215 : - |
To GenomeBrowser | habu1_scaffold2279:355645..363215 |
Genes list of scaffold | habu1_scaffold2279 |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
habu1_s2279_g08232.t1 | 1 | 1 | Arrestin_N | 19 | 159 | 4.0e-37 | 127.3 | 1.8e-39 | 4.4e-36 | 123.9 |
habu1_s2279_g08232.t1 | 1 | 1 | Arrestin_C | 182 | 307 | 7.7e-26 | 90.8 | 3.3e-24 | 8.1e-21 | 74.5 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
habu1_s2279_g08232.t1 | gi|602635349|ref|XP_007424541.1| | PREDICTED: arrestin domain-containing protein 2-like isoform X1 [Python bivittatus] | 0.0 |
habu1_s2279_g08232.t1 | gi|530565001|ref|XP_005279071.1| | PREDICTED: arrestin domain-containing protein 2 isoform X1 [Chrysemys picta bellii] | 0.0 |
habu1_s2279_g08232.t1 | gi|543728923|ref|XP_005505536.1| | PREDICTED: arrestin domain-containing protein 2 [Columba livia] | 0.0 |
habu1_s2279_g08232.t1 | gi|729729349|ref|XP_010560474.1| | PREDICTED: arrestin domain-containing protein 2 isoform X1 [Haliaeetus leucocephalus] | 0.0 |
habu1_s2279_g08232.t1 | gi|543376181|ref|XP_005531299.1| | PREDICTED: arrestin domain-containing protein 2 [Pseudopodoces humilis] | 0.0 |
Expression profile
Libraries | FPKM |
---|---|
>Adult | |
Venom fang forming tissue | 4.5 |
Venom grand-1 | 15.3 |
Pit, infrared sensing | 10.8 |
Nose | 8.0 |
Brain-1 | 2.9 |
Eye | 4.9 |
fetal fibroblast | 0.5 |
venom gland-2 | 2.5 |
Brain-2 | 1.6 |
Spleen | 11.3 |
Lung | 18.2 |
Liver | 59.1 |
Kidney | 3.5 |
Pancreas | 5.8 |
Small intestine | 4.0 |
Large intestine | 43.1 |
Stomach | 15.8 |
heart | 8.7 |
ovary | 10.5 |
cheek muscle | 18.1 |
Transcript
Transcript ID | habu1_s2279_g08232.t1 |
---|---|
Definition | - |
>habu1_s2279_g08232.t1 gtggctgtgggctgcagaggggcgctcgggaggcgctgaagcatttaaaggggccgtgcgtcgaggagagccaaagcgcg acttgcgccccacttgatcggacgccatgctcttcgatcgcctgaagcgcttcgccatcgtgctggactgcccggagttg gcctcgcccccggtcttcagctcgggcgagagcgtggccggtcgcgtcgtgctggagctgtccggcgaggcgcgcttggg ctccctccacctccacgccgagggctgcgccaaggtccactggaccgagtcccgcagcgccggctccagcacagcctaca cgcagagctacggcgaccaggtggacttcctcaaccaccgggagaccctcctcgccccgccagacaatggagatgtcaca gtccttcaggcaggaaggcatgaatttcccttcactttccagctcccagggaccttggccacctcctttgaaggcaagca tggcagtgtccgctactgggtgaaggccaaattacaccggccttggtcttccatcaaacgagccaagaaggagttcacag tcattgaacccattgatatcaacacaccagtcttactgactcctcaggctggtgtcaaagaaaagctggcgcgagcgtgg tactgtaaccgtggccaggtttcggtctcagccaaaattgatcggaaaggctacacaccaggtgaggtcatccccatctt tgctgaaattgacaactgcaccaaccgttctgtggtaccaaaggctgccatcattcagacacaaacgttcattgcccgag gcactaaaaaacagaagaaatgtgtggtggcaagcattgcgggagactccattgtagcagggacgagagaggtgtggcat ggccgtgcgctaaagatcccaccggttgggccctccatcctgcagtgtcgcatcatccatgttgaatatgcactgaaggt ctgtgttgacatcccgggaacttctaagctgctcctggagttgccactagtgataggcacaatccccttacacccatttg gcagccgcacttcgagcatcagcagccagtacagcctcaatatggactggctacagttggggatctctgaacagcctgag gctcctccagagtactcttctgtagtgtctggtgaagaagccattgagaacttgtcccctccttctcaggatgagactcc tgccttacttgaagggcctttctttgcctatatccaagaatttcgtttccgaccgcctcctctctactcagaggtggacc ccaaccctccatctgaccacagcatccgtccacgttgcatgacttgctgaaggaagcactgcctgacttgagatcaacgg aaatcctttataagagagattaccacagtggaagctccatggtggggtgaagaacaggctttttgccccaggagaaatgt gggtgcccattcttagtcggtgctctacacagaatgccttcattggactctctccgcaacagagcgagcttgtccgagct agatcggcattggtgatgaagaaagagaagagagctcttcctcagtgcataagtggtgactgttcaggatcagcacaaaa acatttgaactctagaccgatctctgtgctttcctcgggtgcatttcactatgtcctccctatacctacagagggttttt tttttactctgtgtagactgaagctgcagaaagaacccatccgccctgagaatctgatgagaagacatttctgctccatt gcctagaattccataaatgtctttgagacggaagttggctaaaagaattcctgccttatgacactttgtcactattaaga cttctggtatattttttgggggggattacccatttggggttcacttttaagtttcacccaacaagcaggtgcttagggga atggtgaagggttgagtggataagagtctccagtctaaaaattgttgatgaggacagaaggggtgcacatgtttttctcc cttacatcatcagggagtgatttgttttcgattaatgcaacagaattgtaattgtactatctgggtataggattgacgtg gttgttaacagatgattgatttgcaatttcagttatagtgggtctaaattctcaaaacttaacgtttttgagatacagaa tttagaaaaaaaaatctttggaatgttggctgtatgaatgctacagaaacgcaaaatagatatggattgtatgaaaagtt attgggagggcgctttcccccatttcaaaatgggtcttaattagactcccaagcaggagtggggggagaaaaatcacccc tccctcaaatgcattccggatgcttctaagcaggtaaacatcctgcttctgccccatgtagggctggtggccttgttttt gtacctcttttctgttattgcatactctgctttgatactgaccataaacctatttctaggtttgcattttataaatgtgg ctgcctttaactgtttgaaaacaatgtgtgtttctcagaattcctagttttgtacaaagtttgcaattaaattaatcaaa ctttttaattgct |
Protein
Protein ID | habu1_s2279_g08232.t1 |
---|---|
Definition | - |
>habu1_s2279_g08232.t1 MLFDRLKRFAIVLDCPELASPPVFSSGESVAGRVVLELSGEARLGSLHLHAEGCAKVHWTESRSAGSSTAYTQSYGDQVD FLNHRETLLAPPDNGDVTVLQAGRHEFPFTFQLPGTLATSFEGKHGSVRYWVKAKLHRPWSSIKRAKKEFTVIEPIDINT PVLLTPQAGVKEKLARAWYCNRGQVSVSAKIDRKGYTPGEVIPIFAEIDNCTNRSVVPKAAIIQTQTFIARGTKKQKKCV VASIAGDSIVAGTREVWHGRALKIPPVGPSILQCRIIHVEYALKVCVDIPGTSKLLLELPLVIGTIPLHPFGSRTSSISS QYSLNMDWLQLGISEQPEAPPEYSSVVSGEEAIENLSPPSQDETPALLEGPFFAYIQEFRFRPPPLYSEVDPNPPSDHSI RPRCMTC |