Gene
| Gene Model ID | habu1_s2279_g08233 |
|---|---|
| Locus | habu1_scaffold2279 : 367256 ... 426625 : - |
| To GenomeBrowser | habu1_scaffold2279:367256..426625 |
| Genes list of scaffold | habu1_scaffold2279 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| interleukin-12 receptor subunit beta-1 | GO:0009987 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2279_g08233.t1 | 1 | 1 | fn3 | 414 | 485 | 6.5e-11 | 42.2 | 4.3e-12 | 2.1e-08 | 34.1 |
| habu1_s2279_g08233.t1 | 1 | 1 | Arrestin_N | 811 | 878 | 5.6e-07 | 29.4 | 3.7e-10 | 1.8e-06 | 27.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2279_g08233.t1 | gi|637377124|ref|XP_008123126.1| | PREDICTED: interleukin-12 receptor subunit beta-1 [Anolis carolinensis] | 0.0 |
| habu1_s2279_g08233.t1 | gi|677986474|ref|XP_009074378.1| | PREDICTED: interleukin-12 receptor subunit beta-1 [Acanthisitta chloris] | 0.0 |
| habu1_s2279_g08233.t1 | gi|543729067|ref|XP_005505607.1| | PREDICTED: interleukin-12 receptor subunit beta-1 [Columba livia] | 0.0 |
| habu1_s2279_g08233.t1 | gi|729729597|ref|XP_010560607.1| | PREDICTED: interleukin-12 receptor subunit beta-1 [Haliaeetus leucocephalus] | 0.0 |
| habu1_s2279_g08233.t1 | gi|699665096|ref|XP_009899413.1| | PREDICTED: interleukin-12 receptor subunit beta-1 [Picoides pubescens] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.1 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.1 |
| Nose | 0.2 |
| Brain-1 | 0.0 |
| Eye | 0.1 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.0 |
| Brain-2 | 0.1 |
| Spleen | 0.5 |
| Lung | 0.1 |
| Liver | 0.1 |
| Kidney | 0.0 |
| Pancreas | 0.0 |
| Small intestine | 0.4 |
| Large intestine | 0.8 |
| Stomach | 0.2 |
| heart | 0.1 |
| ovary | 0.6 |
| cheek muscle | 0.0 |
Transcript
| Transcript ID | habu1_s2279_g08233.t1 |
|---|---|
| Definition | - |
>habu1_s2279_g08233.t1 ggtgcatgtgagaaaaggtaataagtcagttttttcagcgccattgtaacttcggaagatcattaagctggtggtgatgg tgtggttggctgcaccagagctcttgagcgatcccagcaattgtgctccccaaaatttgatttgctacaagccctgctgt gaagcatccttccactgtcttatgaactgctcctgggagactggatgtaaagaagatgtcaactacatcctcaactttag ggatcaaacagaagggaagaaaaagacatttgaggttgaaaaggccacccactttatttttaatacggacacgttctatg ctctaagaaatgttactgtctgggtagaaagcgtgccgagggacggtcctcctcgggtctcaaaaaatcatacactgctg ctcaaggaagccataaaatttaatccaccatcagccaagtctatcagcatttctagatcgaaagatatcctgaccttgaa atggcctggatccagcacttgtcgctctacactaaacgaagtcaggataagacagttaaaccatacaaattggacactgg gaaattgtacctccaaaaaggatgaaggcaccatggaggaattaatagttgccatgtgtcatctgggaaaaaatatctct tatgacgcgcaggttcggtatcgaactgatcactcaagcagtcactggagcagctggagcgaagtcttctttgttcccac tgaaatcctcagaagtccctcagtaaattatactgtggggtccctaggaaaggaaggcctgaggaatgtgactctgcagt gggcgagacctcctatggagcaaggggaagtgagctataatctcacttttgtcatgctggcctgcaagcagtgccttttt ggcttggaaaagtataacattaccgtacgtggtgcaactcagtgctacactgctctttctgcagctgaatataacatttc gctggtggcatttaacaaagtgggacattctccagcttatccttttaagctaccaccagaacaaaatgcagtcctaggtc ccaattttatgaacgtcagtctgtccggaaggcattttactctgaagtggaaagtggacgacgatttgactttcttttgc tttgaagttcagcttcttggagaaaccttgcctaaggaagactgtatggatcctaataatgcttacctggttacagggaa aatggagttcaacaggtgttatcgctttgcagtgtacagatatgacgataaagtgcagtggaaaacttttggatataggt acctttttcatagaaatgcttctcttgaagatgccacccatgtaaatgtgaccaaccaaacagcaaattctgccgtcatc cagtggaagcctcccagagccctctctgattgcccaggtgtactgaagaaatatgtcatatgttgtcaaaaggagcaata cagtaacatcatatattatgacgtcaacgtgtcacaaacatggtatacgatccaggacttagagcctgacactgtctatc ttgttggcatctgggtctctacggcaaacaacaaagacaactgcaaagctttttatagatttcttaccaaagctccagat ctcaagcagctgccactggtgcttagctttttatttatagggatttttggagtcatccttattgtcaccaccatcttcta ccttgtcaaaaaaagaatgaaaaatgtattgtgctcagcattgccagatcctgctaatacagaagctgtgaagttccaca ccatagcagaagtagaccaggcccaggtaaaattgagttttatggaaccaatggaatccaacagccccatggaactattg gttgtagaaccttcatctgacaaagaggaatcagttactgatacaacaatggacttcttgggatttgtcaaagtaaaaga agaggaacattctcccaaagaggatgaggtagtctctgatgaaatcctactttccgaatataaggggcaaagatttttga gtcctgtggaagaatctgaagattttgtagatgtttctcatgaagaaagcactggtgatggtccccatctcttcctgaac aatactgaagctggagaccaaaatgacatgtgaggtgattttgccctgagaggtgatggccataactatttcaacacttc ttaccaatcacagttcacaggtgaatggacacctccaatcaagagctgcaacgaaaatatggtatcgatagtctttggtg accctcggtaccgccaggcagtgagtgagcagaagcgtgcatacactgtccaggaacctgaaggccaacgcccagggcta cgtgctgaagagcagttgcagggggaaaaaagacacccttccaacatcgcgctcgtagttcagaagcagcctccagccgg tcctgctctccagcggcttgaccggaggatcctgcagcccgaaatgcagcatttcagcaggatccgtacttttatgctgg agctggacgcaggacggggtcctggaatcgcgtaccggggaggagagctgctttccggccgagtggtgttggatgtggcc aaaggactaaaagtgagagctttggcagtctgcgcgcggggcttggcggctacccattggctggagagcaagagttttgg catgaacacggtctatagcgactacactgcctacgagacctacctgcgaagacggcagcacctgatcagaggtttgggct ggaagagtggaatgtagaaataggaaagaaagttatcattttcagaaatcttcctgggacccaggataccaagcctgtag ctatttgcacaaggatgtgtaaacataaaaagctttttctgagatttgact |
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Protein
| Protein ID | habu1_s2279_g08233.t1 |
|---|---|
| Definition | - |
>habu1_s2279_g08233.t1 MVWLAAPELLSDPSNCAPQNLICYKPCCEASFHCLMNCSWETGCKEDVNYILNFRDQTEGKKKTFEVEKATHFIFNTDTF YALRNVTVWVESVPRDGPPRVSKNHTLLLKEAIKFNPPSAKSISISRSKDILTLKWPGSSTCRSTLNEVRIRQLNHTNWT LGNCTSKKDEGTMEELIVAMCHLGKNISYDAQVRYRTDHSSSHWSSWSEVFFVPTEILRSPSVNYTVGSLGKEGLRNVTL QWARPPMEQGEVSYNLTFVMLACKQCLFGLEKYNITVRGATQCYTALSAAEYNISLVAFNKVGHSPAYPFKLPPEQNAVL GPNFMNVSLSGRHFTLKWKVDDDLTFFCFEVQLLGETLPKEDCMDPNNAYLVTGKMEFNRCYRFAVYRYDDKVQWKTFGY RYLFHRNASLEDATHVNVTNQTANSAVIQWKPPRALSDCPGVLKKYVICCQKEQYSNIIYYDVNVSQTWYTIQDLEPDTV YLVGIWVSTANNKDNCKAFYRFLTKAPDLKQLPLVLSFLFIGIFGVILIVTTIFYLVKKRMKNVLCSALPDPANTEAVKF HTIAEVDQAQVKLSFMEPMESNSPMELLVVEPSSDKEESVTDTTMDFLGFVKVKEEEHSPKEDEVVSDEILLSEYKGQRF LSPVEESEDFVDVSHEESTGDGPHLFLNNTEAGDQNDMXGDFALRGDGHNYFNTSYQSQFTGEWTPPIKSCNENMVSIVF GDPRYRQAVSEQKRAYTVQEPEGQRPGLRAEEQLQGEKRHPSNIALVVQKQPPAGPALQRLDRRILQPEMQHFSRIRTFM LELDAGRGPGIAYRGGELLSGRVVLDVAKGLKVRALAVCARGLAATHWLESKSFGMNTVYSDYTAYETYLRRRQHLIRGL GWKSGM |
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