Gene
| Gene Model ID | habu1_s2279_g08235 |
|---|---|
| Locus | habu1_scaffold2279 : 525771 ... 551713 : + |
| To GenomeBrowser | habu1_scaffold2279:525771..551713 |
| Genes list of scaffold | habu1_scaffold2279 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2279_g08235.t1 | 1 | 1 | RhoGAP | 129 | 274 | 1.1e-21 | 77.0 | 1.4e-24 | 3.0e-21 | 75.6 |
| habu1_s2279_g08235.t1 | 2 | 1 | SH2 | 334 | 409 | 9.19994e-41 | 137.5 | 1.5e-21 | 3.3e-18 | 65.2 |
| habu1_s2279_g08235.t1 | 2 | 2 | SH2 | 626 | 700 | 9.19994e-41 | 137.5 | 7.4e-23 | 1.6e-19 | 69.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2279_g08235.t1 | gi|602635355|ref|XP_007424544.1| | PREDICTED: phosphatidylinositol 3-kinase regulatory subunit beta [Python bivittatus] | 0.0 |
| habu1_s2279_g08235.t1 | gi|543288061|ref|XP_005429555.1| | PREDICTED: phosphatidylinositol 3-kinase regulatory subunit beta [Geospiza fortis] | 0.0 |
| habu1_s2279_g08235.t1 | gi|542181739|ref|XP_005496508.1| | PREDICTED: phosphatidylinositol 3-kinase regulatory subunit beta [Zonotrichia albicollis] | 0.0 |
| habu1_s2279_g08235.t1 | gi|690429598|ref|XP_009333571.1| | PREDICTED: phosphatidylinositol 3-kinase regulatory subunit beta [Pygoscelis adeliae] | 0.0 |
| habu1_s2279_g08235.t1 | gi|683930620|ref|XP_009095112.1| | PREDICTED: phosphatidylinositol 3-kinase regulatory subunit beta [Serinus canaria] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 14.0 |
| Venom grand-1 | 25.3 |
| Pit, infrared sensing | 14.1 |
| Nose | 11.2 |
| Brain-1 | 6.8 |
| Eye | 12.0 |
| fetal fibroblast | 30.4 |
| venom gland-2 | 40.3 |
| Brain-2 | 6.9 |
| Spleen | 14.3 |
| Lung | 24.8 |
| Liver | 28.2 |
| Kidney | 146.7 |
| Pancreas | 28.0 |
| Small intestine | 107.7 |
| Large intestine | 19.5 |
| Stomach | 21.3 |
| heart | 15.0 |
| ovary | 33.1 |
| cheek muscle | 3.0 |
Transcript
| Transcript ID | habu1_s2279_g08235.t1 |
|---|---|
| Definition | - |
>habu1_s2279_g08235.t1 ggcccaggagagctgtcgtttcaccttcatgcagagctcttgagagggaagtgggacagccaccctcagcccacccctct tttccattttttccctcgccggtgcatttgcttgcccttttccaggggactatggggagcacggaaggcttccagtatcg ggccctctacccttaccgtaaggaacgcaacgaagacatcgatctgttacctggggacaccttggtggtgagcaaggggg ccttgcaggcactgggctttaaggatggagatgagcaaatgccaaaccagattggctggattctgggggtcaacgagcgc accaaacaaaagggggatttcccaggcacctatgtggagtatgtggggccagtgaaaatctccctcccgtcccatcgtcc cagggtcaccaggcctctgcccgccactcctggaacaggagcatcccatgctccggaggatcagggggtgacacttccag aactttctgagcagtttgccccacccgaggtcgccccacctctgctgtgtaggctggtggatgtgattgagaagaaaggg ttagacagcaagatgctctacagaacatctggctccgaactaaggcaagcattgagaaccgactgggctgtgactggcga tttggaggccttagatgtgaattccctgggcgaggctctcaaggggtacctgcaagatctgccaaccccggtggtacccc cttgtgtgcagggtgaaatcttacgagtgctccaagatgttacccaaacagagctttgtcaaaagcagctgctttcggtg ttggagtctccagccatgcctctgccacacctcctcactttccagttcctgctccggcacttttccaaggtggctgaaca agctgaaagcaatggattgttgcctcggaccctgagtgagatctttggggttctgctccttcggctccctgcagctgcca gctctgagacgacccctgactttccaaccctcttcctggagacccttctgcaaaccaaggaccctgagccagatcttccc cctccagctctgcctccaaagccacccaaagcgaaacctgcagcagcctctctaaccaacgggaatggcacaaccctgca ggatgcagagtggtactggggagacatctccagagaggaagtgaatgaaaagctccgagacactcctgatggtacctttc tggtgagggatgcttctagcaagatccagggtgaatatacattgactctccggaaagggggaaacaacaaactgatcaag attttccaccgggaaggcaaatatggcttctcagagccgctgacctttggctctgtggtggaactcatcaaccactaccg gcacgagtccctggcccagtacaatgccaagctggacactcggttactgtacccaatctccaagtaccaacaggaccagg tagtgaaggaggacagcgtggaagcggttggggagcagctgaaagtctatcaccagcagtaccaggacaagagccgcgag tacgaccttctgtacgaagaatacacacgcacctcgcaggaactgcagatgaaacggacggccattgaggccttcaatga aaccatcaagatctttgaagagcagtgccagacgcaggagaaatgcagccgggactacgtggagcgcttccggagggaag ggaacgagaaggaggtgcagcggatcatgatgaattcagaaaagctgaagtctcgcattacggaaattcatgacagcaag atgaagctggagcaggacctcaagcagcaggcctccgaaaaccgggagatcgacaagcgcatgaacagtcttaaacctga cttgttgcagctgcgcaaactccgtgaccaatacctcgtatggttgacccagaagggaactcgtcagaagaagatcaatg aatggcttggcatcaagagtgaaactgaggaccaatactccatgatggaggatgaagaagagctgccccatcacgatgac cggacgtggtatgtaggcaagatcaaccgcatccaggcagaggaaatgctggtgggcaaacgtgatggaacctttcttat tcgggagagcagccagcgagggtgctatgcctgctctgttgtggtggatggagacaccaaacactgcgtgatttacaaga cagcaacaggctacggctttgcagaaccttacaacctctacgcctcgcttaaggagttggttttgcactacaagcacacc tccctcgtgcagcacaatgactcactcaatgtcacactggcacacccgatcctctcccagcctccaccaagatgaacgct tgtcttctctgccactttccacttcctacccttccagaatctccgatgaatggcttgcctttccttgaccgccccatggg atcaaaaacccctcagatttccttcttgtgttcaccgttaactatgcctgttgttcagtatcttgcttttcatcggtggc tctcctcttctacttcattttcctgcctacgctcgtttctctaagccggtatttttcaaccttgacaatgttaag |
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Protein
| Protein ID | habu1_s2279_g08235.t1 |
|---|---|
| Definition | - |
>habu1_s2279_g08235.t1 MGSTEGFQYRALYPYRKERNEDIDLLPGDTLVVSKGALQALGFKDGDEQMPNQIGWILGVNERTKQKGDFPGTYVEYVGP VKISLPSHRPRVTRPLPATPGTGASHAPEDQGVTLPELSEQFAPPEVAPPLLCRLVDVIEKKGLDSKMLYRTSGSELRQA LRTDWAVTGDLEALDVNSLGEALKGYLQDLPTPVVPPCVQGEILRVLQDVTQTELCQKQLLSVLESPAMPLPHLLTFQFL LRHFSKVAEQAESNGLLPRTLSEIFGVLLLRLPAAASSETTPDFPTLFLETLLQTKDPEPDLPPPALPPKPPKAKPAAAS LTNGNGTTLQDAEWYWGDISREEVNEKLRDTPDGTFLVRDASSKIQGEYTLTLRKGGNNKLIKIFHREGKYGFSEPLTFG SVVELINHYRHESLAQYNAKLDTRLLYPISKYQQDQVVKEDSVEAVGEQLKVYHQQYQDKSREYDLLYEEYTRTSQELQM KRTAIEAFNETIKIFEEQCQTQEKCSRDYVERFRREGNEKEVQRIMMNSEKLKSRITEIHDSKMKLEQDLKQQASENREI DKRMNSLKPDLLQLRKLRDQYLVWLTQKGTRQKKINEWLGIKSETEDQYSMMEDEEELPHHDDRTWYVGKINRIQAEEML VGKRDGTFLIRESSQRGCYACSVVVDGDTKHCVIYKTATGYGFAEPYNLYASLKELVLHYKHTSLVQHNDSLNVTLAHPI LSQPPPR |
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