Gene
| Gene Model ID | habu1_s2279_g08236 |
|---|---|
| Locus | habu1_scaffold2279 : 564761 ... 581018 : + |
| To GenomeBrowser | habu1_scaffold2279:564761..581018 |
| Genes list of scaffold | habu1_scaffold2279 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| gamma-interferon-inducible lysosomal thiol reductase | GO:0002478 GO:0005737 GO:0008152 GO:0043231 GO:0044699 GO:0050789 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2279_g08236.t1 | 1 | 1 | SapA | 23 | 50 | 7.6e-06 | 25.5 | 2.5e-09 | 1.9e-05 | 24.3 |
| habu1_s2279_g08236.t1 | 1 | 1 | GILT | 61 | 162 | 8.0e-23 | 80.3 | 1.9e-26 | 1.4e-22 | 79.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2279_g08236.t1 | gi|602635357|ref|XP_007424545.1| | PREDICTED: LOW QUALITY PROTEIN: gamma-interferon-inducible lysosomal thiol reductase [Python bivittatus] | 0.0 |
| habu1_s2279_g08236.t1 | gi|558179263|ref|XP_006126886.1| | PREDICTED: gamma-interferon-inducible lysosomal thiol reductase [Pelodiscus sinensis] | 0.0 |
| habu1_s2279_g08236.t1 | gi|637377152|ref|XP_008123131.1| | PREDICTED: gamma-interferon-inducible lysosomal thiol reductase [Anolis carolinensis] | 0.0 |
| habu1_s2279_g08236.t1 | gi|591355774|ref|XP_007072191.1| | PREDICTED: LOW QUALITY PROTEIN: gamma-interferon-inducible lysosomal thiol reductase [Chelonia mydas] | 0.0 |
| habu1_s2279_g08236.t1 | gi|573904569|ref|XP_006640006.1| | PREDICTED: gamma-interferon-inducible lysosomal thiol reductase-like [Lepisosteus oculatus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 54.0 |
| Venom grand-1 | 79.0 |
| Pit, infrared sensing | 67.4 |
| Nose | 98.1 |
| Brain-1 | 5.1 |
| Eye | 23.7 |
| fetal fibroblast | 7.8 |
| venom gland-2 | 108.0 |
| Brain-2 | 6.2 |
| Spleen | 119.9 |
| Lung | 63.0 |
| Liver | 370.3 |
| Kidney | 267.5 |
| Pancreas | 65.4 |
| Small intestine | 302.4 |
| Large intestine | 133.1 |
| Stomach | 119.3 |
| heart | 14.8 |
| ovary | 4.6 |
| cheek muscle | 13.4 |
Transcript
| Transcript ID | habu1_s2279_g08236.t1 |
|---|---|
| Definition | - |
>habu1_s2279_g08236.t1 acgaagagcagccgaagaggaaaaacaggttgccctgagcaggaaaggggcgggcgggcgggggcggagagagtttaaag gcccaccaaactgctctcggcgcccaagatttgggagcgcttcgccatgggtggttggcttcttgtcctcatcgccggca gcctctgggcgagctgcggggaaggtagccgcccgacgtgcgattatccgccgcaactttggtgcagttccaaagagatc gcccaagcctgccaggtggagaagcattgcaccaggttgatctccaacttcccgaaagccgaccgtgtctctgtgagcct ctactatgaatccctctgttctggttgccgcaaatttctggtactgatgctctttcccacttggctgatgctacatgaca tcatgaacgtcactttagtcccctacgggaatgcagaggagtctaaagaggccacaaaatggcattttgagtgccagcat ggcaaagaggaatgcttggggaacatgatagaggcttgtattagccacctgtatccagagatggatttggggctcatctt ctgcatggagtcaagtaacgatgtcatcggcagcttgccactgtgcctgaaactgtatgctcccaatgcctctctagcag atatcaaggcatgtgtgaatggagacctaggtaacaagcttatgcataggaatgctgaactcaccagggctcttaaaccg cgtcatgagtacgtgccatggattctcatcaatggggcccacactgaaaaacttcaaactcaagcacaagaatctctctt caatttggtgtgcagcttgtacaagggagatttgccagctgcctgcaaaaggccagaggaacgttcttttctttcttttt ccccaaatcacactttcctgaggaacgccgcacccaacttgtccgatcttctagggagagagaagacagttcatcagtct gcccgaacaaaagcaaaggaaaccttttaggattttaattctacattatctgttgaattttcctgctacaaggtggagct taggtctggaatgtggggaagtcaaggaacaactgcctctttcaaagaggcagaagcaaaatcagggccagatgttttgg gaagaagagtggtgtcttgattttcttggtgctacaagaataaacatttggaaaagtaacttctgt |
|
Protein
| Protein ID | habu1_s2279_g08236.t1 |
|---|---|
| Definition | - |
>habu1_s2279_g08236.t1 MGGWLLVLIAGSLWASCGEGSRPTCDYPPQLWCSSKEIAQACQVEKHCTRLISNFPKADRVSVSLYYESLCSGCRKFLVL MLFPTWLMLHDIMNVTLVPYGNAEESKEATKWHFECQHGKEECLGNMIEACISHLYPEMDLGLIFCMESSNDVIGSLPLC LKLYAPNASLADIKACVNGDLGNKLMHRNAELTRALKPRHEYVPWILINGAHTEKLQTQAQESLFNLVCSLYKGDLPAAC KRPEERSFLSFSPNHTFLRNAAPNLSDLLGREKTVHQSARTKAKETF |
|