Gene
| Gene Model ID | habu1_s2279_g08248 |
|---|---|
| Locus | habu1_scaffold2279 : 849801 ... 864404 : + |
| To GenomeBrowser | habu1_scaffold2279:849801..864404 |
| Genes list of scaffold | habu1_scaffold2279 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2279_g08248.t1 | 1 | 1 | Calreticulin | 22 | 333 | 0.0 | 373.3 | 0.0 | 0.0 | 373.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2279_g08248.t1 | gi|591355748|ref|XP_007072178.1| | PREDICTED: calreticulin-like [Chelonia mydas] | 0.0 |
| habu1_s2279_g08248.t1 | gi|641771593|ref|XP_008169826.1| | PREDICTED: calreticulin-3 [Chrysemys picta bellii] | 0.0 |
| habu1_s2279_g08248.t1 | gi|637381466|ref|XP_008123870.1| | PREDICTED: calreticulin-like, partial [Anolis carolinensis] | 0.0 |
| habu1_s2279_g08248.t1 | gi|558159477|ref|XP_006122509.1| | PREDICTED: calreticulin-like [Pelodiscus sinensis] | 0.0 |
| habu1_s2279_g08248.t1 | gi|543729079|ref|XP_005505613.1| | PREDICTED: calreticulin-like [Columba livia] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.0 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.0 |
| Nose | 0.1 |
| Brain-1 | 0.0 |
| Eye | 0.0 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.0 |
| Brain-2 | 0.0 |
| Spleen | 0.0 |
| Lung | 0.1 |
| Liver | 0.0 |
| Kidney | 0.0 |
| Pancreas | 0.0 |
| Small intestine | 0.1 |
| Large intestine | 0.0 |
| Stomach | 0.1 |
| heart | 0.0 |
| ovary | 2.0 |
| cheek muscle | 0.0 |
Transcript
| Transcript ID | habu1_s2279_g08248.t1 |
|---|---|
| Definition | - |
>habu1_s2279_g08248.t1 gttggcctccggcagctgttgcctcagcaataattgttcgctactgcctttcgatgggatcgctgttgctcgccctgatt ctggttttagctcagcctctgccagtccacggcacggtctatttccgggagcagtttctggacggagcaaaatggaagga gagatgggtggtctctcagtataaatccaactatggaaaatttaggttgacagctggaaatttttatggtgatcgtgaag cagacaaaggtctgcagacaattgaaaatttaaagttttatgccatctcatcacgatttaaaccattcagcaataaagga aaatcattggtagttcaatatacagtaaagcatgaacagaaaattgactgtggtggtggttatgtgaaaatatttccctc cagtctggaccaaaagaatatgaatggggagtctctttattacatcatgtttgggcctgatatatgtggttctgatacaa agaaagtccacataattttaaactacaagaataaagtttatcctgtaaagaaacaaattcgctgcaaagtagatgggttc acacacctatatacactggttttaaaaccggatcacacgtataaagtgaaaattgataatgaaatggtgatatcaggcat tttagaagatgactgggacttcttgacaccaaggagaataaatgatccagcagtgaagaaaccagagaattgggatgatg aagctgaacttgatgatccagaggacactaagccagaggattgggatattgatgaatacattgtggacaacagcgctgaa aaacctaaagactgggatgaggcagcacagggcacctggcagcctcctctgctcaagaaccctctctacaggggggagtg gcggcccaggaaaatcccaaatcccaactacaaaggcatttgggcccatccccagattgcgaatcctgaatatgtgccag acccaagcctttctatttatgagaacatcagcgtcattggtctagatctttggcaggtgagatctggaactatttttgat aattttttgatcactgatgatgaaaagtatgcaaagaaatttggtgatgaaacatggggcaaaacaaagaagccggaaca ggcaatgagcaagaaagaaatagagaaaggaaaggaaaggaaacagagaaaaacccagaagatgccaaaaaagaaaccac ctcaaaagaacaaatctgagaggattgtagcgcagaaggaggagctctgatttttttctcagaatttaaattggagctaa caagtggaagatattaagggctggggaccacgtttgattaaacagataccttggaaaaccgttt |
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Protein
| Protein ID | habu1_s2279_g08248.t1 |
|---|---|
| Definition | - |
>habu1_s2279_g08248.t1 MGSLLLALILVLAQPLPVHGTVYFREQFLDGAKWKERWVVSQYKSNYGKFRLTAGNFYGDREADKGLQTIENLKFYAISS RFKPFSNKGKSLVVQYTVKHEQKIDCGGGYVKIFPSSLDQKNMNGESLYYIMFGPDICGSDTKKVHIILNYKNKVYPVKK QIRCKVDGFTHLYTLVLKPDHTYKVKIDNEMVISGILEDDWDFLTPRRINDPAVKKPENWDDEAELDDPEDTKPEDWDID EYIVDNSAEKPKDWDEAAQGTWQPPLLKNPLYRGEWRPRKIPNPNYKGIWAHPQIANPEYVPDPSLSIYENISVIGLDLW QVRSGTIFDNFLITDDEKYAKKFGDETWGKTKKPEQAMSKKEIEKGKERKQRKTQKMPKKKPPQKNKSERIVAQKEEL |
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