Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s2279_g08249
Locus habu1_scaffold2279 : 866181 ... 921663 : +
To GenomeBrowser habu1_scaffold2279:866181..921663
Genes list of scaffold habu1_scaffold2279

Annotation by Blast2GO
Annotation GO
epidermal growth factor receptor substrate 15-like 1 isoform x1 GO:0005509 GO:0030132

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s2279_g08249.t3 3 1 EF-hand_4 34 81 1.59748e-43 146.6 1.3e-08 7.4e-06 25.6
habu1_s2279_g08249.t3 3 2 EF-hand_4 126 215 1.59748e-43 146.6 2.1e-26 1.1e-23 82.8
habu1_s2279_g08249.t3 1 1 EF-hand_1 165 188 6.9e-10 37.5 4.9e-06 0.0027 16.9
habu1_s2279_g08249.t3 3 3 EF-hand_4 278 365 1.59748e-43 146.6 4.1e-11 2.3e-08 33.7
habu1_s2279_g08249.t3 1 1 EF-hand_7 279 336 1.1e-09 38.2 1.9e-06 0.001 19.1

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 4.9
Venom grand-1 9.7
Pit, infrared sensing 5.3
Nose 5.9
Brain-1 5.6
Eye 5.9
fetal fibroblast 9.4
venom gland-2 10.2
Brain-2 6.1
Spleen 4.9
Lung 8.5
Liver 2.5
Kidney 10.6
Pancreas 9.4
Small intestine 9.4
Large intestine 5.4
Stomach 10.0
heart 9.1
ovary 24.3
cheek muscle 11.9

Transcript
Transcript IDhabu1_s2279_g08249.t1
Definition-
>habu1_s2279_g08249.t1
cgtccgtctctggccgctcccctcccaggaggaggaggaggaagatggcggtgctcggccccctcggcggcggcgcgcag
ctctccgccggtaaccctctgtatgagacatattacaagcaggtggatccagcttgcactggtagagttgggtccaatga
tgctgctctgtttctcaaaaagtctggcctcacggatgctgtcctggggaaaatatgggatttagcagatccagagggca
aaggatttctggataaacagggattcttcattgcgctgcggctaattgcctgtgcccagagcggccatgatgtcattctc
agcaacttaaatttgacgttacctcctccaaaatttcaggacaatacaagccccctgctgcttgcttccacagatgctca
ctgggctgtcagagtagaagagagggccaagtttgatggcatttttgaaagtcttttacctgtcaacggtttactttcgg
gagacaaagtgaagccagtattgatgaactccaaactacctcttgatgtcttgggacgggtgtgggatctcagtgatatt
gataaagatgggcaccttgacagagatgagtttgccgtggcgatgcacctggtctatcgtgcccttgagaaggaatccgt
cccctctgtgttgcccccatctcttgttccaccttccaagcggaagaaagtgccaatctttcctggggcagtgccagttc
ttccagccagtcctcccccaaaagacagtttgcggtccactccgtcacacggcagcgtcaacagcctcaacagcacagga
agcttgtcccccaaacacagcctgaagcaaacacagccgtctgcaaactgggtggtgccactgactgacaagattcgcta
tgatgaaatatttctgaagacagatttggacctggatggctttgtgagcggccaggaagtgaaggatattttcatgcact
cggggctttcccagaacctcctagcacacatatgggctttggctgataccaggcaaatgggaaagctcaacaaagatcag
tttgcactcgccatgtacctcattcagcagaaggtcagcaaaggcattgacccaccacaggtgctgctcccagatatgat
ccctccttcagaaaggaccactcctgtccagactctctcaggctacttggcctctgtaggaactgagatctcgacactct
cagaaatgcgtcgtgacagctcaagttctgttggatcaggggaattcactggcgtgaaagaactggatgatatcagccaa
gagatcgcacagctacagagagagaaatattctctggaacaagacatccgagaaagagaaggagctattcgacagaaaac
tagtgaagttcaggaactgcaaaacgatttagaccgggaaactagcagcttgcaagaactggaggctcagaagcaggatg
ctcaagatcgccttgatgagatggaccaacaaaaggcaaagctgaaagatatgctaaatgatgttaggcaaaagtgccag
gaagagtcccaagtgatcacatcattaaaaatgcaaattcagtcccaggaatcagatttaaagtcccaagaagatgatat
cagtagagcaaaagctgagttgaatcggcttcagcaggaagaggcccaattggagcagagcatccaggctgggaaagtgc
aacttgaaacaataattaaatctttaaaatccactcaggaagaaattaaccaggcaaggagtaagttatctcggcttcaa
gagacccttcaggaagccaaccagagcatcgaacaatacaacgaagccttaaatggacttcacagtggcagcatgactaa
cctggcagatctgaatgagggaaacatccaaaaagaccggggcgggtttgggaccttggatgatccattcaagaacaaag
ccctacttttcagcaacaatgcccaggaattgcagacggaccctttccaaactgaggatcccttcaaaggagcagatccc
ttcaaaggcagcgacccttttcagaatgacccttttgctgaacagcctcctgcaggagctgatccatttggaggtgatcc
atttaaagaaagtgacccattccggacatctgtgcctgaggatttttttaaaaaggctgaaaaaagtgatccattcactt
cagacccattcttgcaaaattccacactgccctctaaaccaaacctctttgagaacagtgatcctttcctaactctgagc
atgtcttcttcgaaagggccagatccttttgggacattagatgcctttggtagcagcaccttcagcacccatagtagtga
aggatttgcagatttcagtcggatgtcaaagtcgcaaacagatgtctctagaagacttaggagcaggacctatgagcagc
ctccggcttctgatccattctcctcttttggaggagctggattctctgatgatccttttaagactaaagcagacactcct
gccctcccgccgaagaaaaacatgcctcccaggcctgagccacccagtggtaaaagtcctcctgtaagccaagtcgggtc
ttccgattttgccaagccccccgatccatttcagccattcggggctgacagcagtgacccctttcagagtaaaaaggggt
ttggggacctatttagtggaagagtcctgtttgctccttcctcttcaagtaaaccttccaaagactcttcccgggggttt
gctgacttcagttctcttggcaatgaggagcagcagttggcgtgggccaaacgggagagtgagaaggcagagcaggaaag
gctggcgcgattacgaagacaagagcaggaagacctggagttggccattgcgctcactaccccctacttttcttgggacg
ttgtttgtacctcgcaattaaccatttaagtattgaggacgttaattgaggagatctgacctaggaatgactaaccaaga
aagatttttgcggttatggtggaacattcagtggaaatgtcaacccaaatgcagaagctgtgaaaaaaaaaaaaggcaaa
tttcgcattggtataattatggaactagaattgccaatacagcaatgtaatacaaacatacttggaatattgtgta
Transcript IDhabu1_s2279_g08249.t2
Definition-
>habu1_s2279_g08249.t2
cgtccgtctctggccgctcccctcccaggaggaggaggaggaagatggcggtgctcggccccctcggcggcggcgcgcag
ctctccgccggtaaccctctgtatgagacatattacaagcaggtggatccagcttgcactggtagagttgggtccaatga
tgctgctctgtttctcaaaaagtctggcctcacggatgctgtcctggggaaaatatgggatttagcagatccagagggca
aaggatttctggataaacagggattcttcattgcgctgcggctaattgcctgtgcccagagcggccatgatgtcattctc
agcaacttaaatttgacgttacctcctccaaaatttcaggacaatacaagccccctgctgcttgcttccacagatgctca
ctgggctgtcagagtagaagagagggccaagtttgatggcatttttgaaagtcttttacctgtcaacggtttactttcgg
gagacaaagtgaagccagtattgatgaactccaaactacctcttgatgtcttgggacgggtgtgggatctcagtgatatt
gataaagatgggcaccttgacagagatgagtttgccgtggcgatgcacctggtctatcgtgcccttgagaaggaatccgt
cccctctgtgttgcccccatctcttgttccaccttccaagcggaagaaagtgccaatctttcctggggcagtgccagttc
ttccagccagtcctcccccaaaagacagtttgcggtccactccgtcacacggcagcgtcaacagcctcaacagcacagga
agcttgtcccccaaacacagcctgaagcaaacacagccgtctgcaaactgggtggtgccactgactgacaagattcgcta
tgatgaaatatttctgaagacagatttggacctggatggctttgtgagcggccaggaagtgaaggatattttcatgcact
cggggctttcccagaacctcctagcacacatatgggctttggctgataccaggcaaatgggaaagctcaacaaagatcag
tttgcactcgccatgtacctcattcagcagaaggtcagcaaaggcattgacccaccacaggtgctgctcccagatatgat
ccctccttcagaaaggaccactcctgtccaggacagctcaagttctgttggatcaggggaattcactggcgtgaaagaac
tggatgatatcagccaagagatcgcacagctacagagagagaaatattctctggaacaagacatccgagaaagagaagga
gctattcgacagaaaactagtgaagttcaggaactgcaaaacgatttagaccgggaaactagcagcttgcaagaactgga
ggctcagaagcaggatgctcaagatcgccttgatgagatggaccaacaaaaggcaaagctgaaagatatgctaaatgatg
ttaggcaaaagtgccaggaagagtcccaagtgatcacatcattaaaaatgcaaattcagtcccaggaatcagatttaaag
tcccaagaagatgatatcagtagagcaaaagctgagttgaatcggcttcagcaggaagaggcccaattggagcagagcat
ccaggctgggaaagtgcaacttgaaacaataattaaatctttaaaatccactcaggaagaaattaaccaggcaaggagta
agttatctcggcttcaagagacccttcaggaagccaaccagagcatcgaacaatacaacgaagccttaaatggacttcac
agtggcagcatgactaacctggcagatctgaatgagggaaacatccaaaaagaccggggcgggtttgggaccttggatga
tccattcaagaacaaagccctacttttcagcaacaatgcccaggaattgcagacggaccctttccaaactgaggatccct
tcaaaggagcagatcccttcaaaggcagcgacccttttcagaatgacccttttgctgaacagcctcctgcaggagctgat
ccatttggaggtgatccatttaaagaaagtgacccattccggacatctgtgcctgaggatttttttaaaaaggctgaaaa
aagtgatccattcacttcagacccattcttgcaaaattccacactgccctctaaaccaaacctctttgagaacagtgatc
ctttcctaactctgagcatgtcttcttcgaaagggccagatccttttgggacattagatgcctttggtagcagcaccttc
agcacccatagtagtgaaggatttgcagatttcagtcggatgtcaaagtcgcaaacagatgtctctagaagacttaggag
caggacctatgagcagcctccggcttctgatccattctcctcttttggaggagctggattctctgatgatccttttaaga
ctaaagcagacactcctgccctcccgccgaagaaaaacatgcctcccaggcctgagccacccagtggtaaaagtcctcct
gtaagccaagtcgggtcttccgattttgccaagccccccgatccatttcagccattcggggctgacagcagtgacccctt
tcagagtaaaaaggggtttggggacctatttagtggaagagtcctgtttgctccttcctcttcaagtaaaccttccaaag
actcttcccgggggtttgctgacttcagttctcttggcaatgaggagcagcagttggcgtgggccaaacgggagagtgag
aaggcagagcaggaaaggctggcgcgattacgaagacaagagcaggaagacctggagttggccattgcgctcactacccc
ctacttttcttgggacgttgtttgtacctcgcaattaaccatttaagtattgaggacgttaattgaggagatctgaccta
ggaatgactaaccaagaaagatttttgcggttatggtggaacattcagtggaaatgtcaacccaaatgcagaagctgtga
aaaaaaaaaaaggcaaatttcgcattggtataattatggaactagaattgccaatacagcaatgtaatacaaacatactt
ggaatattgtgta
Transcript IDhabu1_s2279_g08249.t3
Definition-
>habu1_s2279_g08249.t3
cgtccgtctctggccgctcccctcccaggaggaggaggaggaagatggcggtgctcggccccctcggcggcggcgcgcag
ctctccgccggtaaccctctgtatgagacatattacaagcaggtggatccagcttgcactggtagagttgggtccaatga
tgctgctctgtttctcaaaaagtctggcctcacggatgctgtcctggggaaaatatgggatttagcagatccagagggca
aaggatttctggataaacagggattcttcattgcgctgcggctaattgcctgtgcccagagcggccatgatgtcattctc
agcaacttaaatttgacgttacctcctccaaaatttcaggacaatacaagccccctgctgcttgcttccacagatgctca
ctgggctgtcagagtagaagagagggccaagtttgatggcatttttgaaagtcttttacctgtcaacggtttactttcgg
gagacaaagtgaagccagtattgatgaactccaaactacctcttgatgtcttgggacgggtgtgggatctcagtgatatt
gataaagatgggcaccttgacagagatgagtttgccgtggcgatgcacctggtctatcgtgcccttgagaaggaatccgt
cccctctgtgttgcccccatctcttgttccaccttccaagcggaagaaagtgccaatctttcctggggcagtgccagttc
ttccagccagtcctcccccaaaagacagtttgcggtccactccgtcacacggcagcgtcaacagcctcaacagcacagga
agcttgtcccccaaacacagcctgaagcaaacacagccgtctgcaaactgggtggtgccactgactgacaagattcgcta
tgatgaaatatttctgaagacagatttggacctggatggctttgtgagcggccaggaagtgaaggatattttcatgcact
cggggctttcccagaacctcctagcacacatatgggctttggctgataccaggcaaatgggaaagctcaacaaagatcag
tttgcactcgccatgtacctcattcagcagaaggtcagcaaaggcattgacccaccacaggtgctgctcccagatatgat
ccctccttcagaaaggaccactcctgtccaggacagctcaagttctgttggatcaggggaattcactggcgtgaaagaac
tggatgatatcagccaagagatcgcacagctacagagagagaaatattctctggaacaagacatccgagaaagagaagga
gctattcgacagaaaactagtgaagttcaggaactgcaaaacgatttagaccgggaaactagcagcttgcaagaactgga
ggctcagaagcaggatgctcaagatcgccttgatgagatggaccaacaaaaggcaaagctgaaagatatgctaaatgatg
ttaggcaaaagtgccaggaagagtcccaagtgatcacatcattaaaaatgcaaattcagtcccaggaatcagatttaaag
tcccaagaagatgatatcagtagagcaaaagctgagttgaatcggcttcagcaggaagaggcccaattggagcagagcat
ccaggctgggaaagtgcaacttgaaacaataattaaatctttaaaatccactcaggaagaaattaaccaggcaaggagta
agttatctcggcttcaagagacccttcaggaagccaaccagagcatcgaacaatacaacgaagccttaaatggacttcac
agtggcagcatgactaacctggcagatctgaatgagggaaacatccaaaaagaccggggcgggtttgggaccttggatga
tccattcaagaacaaagccctacttttcagcaacaatgcccaggaattgcagacggaccctttccaaactgaggatccct
tcaaaggagcagatcccttcaaaggcagcgacccttttcagaatgacccttttgctgaacagcctcctgcaggagctgat
ccatttggaggtgatccatttaaagaaagtgacccattccggacatctgtgcctgaggatttttttaaaaaggctgaaaa
aagtgatccattcacttcagacccattcttgcaaaattccacactgccctctaaaccaaacctctttgagaacagtgatc
ctttcctaactctgagcatgtcttcttcgaaagggccagatccttttgggacattagatgcctttggtagcagcaccttc
agcacccatagtagtgaaggatttgcagatttcagtcggatgtcaaagcctccggcttctgatccattctcctcttttgg
aggagctggattctctgatgatccttttaagactaaagcagacactcctgccctcccgccgaagaaaaacatgcctccca
ggcctgagccacccagtggtaaaagtcctcctgtaagccaagtcgggtcttccgattttgccaagccccccgatccattt
cagccattcggggctgacagcagtgacccctttcagagtaaaaaggggtttggggacctatttagtggaagagtcctgtt
tgctccttcctcttcaagtaaaccttccaaagactcttcccgggggtttgctgacttcagttctcttggcaatgaggagc
agcagttggcgtgggccaaacgggagagtgagaaggcagagcaggaaaggctggcgcgattacgaagacaagagcaggaa
gacctggagttggccattgcgctcactaccccctacttttcttgggacgttgtttgtacctcgcaattaaccatttaagt
attgaggacgttaattgaggagatctgacctaggaatgactaaccaagaaagatttttgcggttatggtggaacattcag
tggaaatgtcaacccaaatgcagaagctgtgaaaaaaaaaaaaggcaaatttcgcattggtataattatggaactagaat
tgccaatacagcaatgtaatacaaacatacttggaatattgtgta

Protein
Protein IDhabu1_s2279_g08249.t1
Definition-
>habu1_s2279_g08249.t1
MAVLGPLGGGAQLSAGNPLYETYYKQVDPACTGRVGSNDAALFLKKSGLTDAVLGKIWDLADPEGKGFLDKQGFFIALRL
IACAQSGHDVILSNLNLTLPPPKFQDNTSPLLLASTDAHWAVRVEERAKFDGIFESLLPVNGLLSGDKVKPVLMNSKLPL
DVLGRVWDLSDIDKDGHLDRDEFAVAMHLVYRALEKESVPSVLPPSLVPPSKRKKVPIFPGAVPVLPASPPPKDSLRSTP
SHGSVNSLNSTGSLSPKHSLKQTQPSANWVVPLTDKIRYDEIFLKTDLDLDGFVSGQEVKDIFMHSGLSQNLLAHIWALA
DTRQMGKLNKDQFALAMYLIQQKVSKGIDPPQVLLPDMIPPSERTTPVQTLSGYLASVGTEISTLSEMRRDSSSSVGSGE
FTGVKELDDISQEIAQLQREKYSLEQDIREREGAIRQKTSEVQELQNDLDRETSSLQELEAQKQDAQDRLDEMDQQKAKL
KDMLNDVRQKCQEESQVITSLKMQIQSQESDLKSQEDDISRAKAELNRLQQEEAQLEQSIQAGKVQLETIIKSLKSTQEE
INQARSKLSRLQETLQEANQSIEQYNEALNGLHSGSMTNLADLNEGNIQKDRGGFGTLDDPFKNKALLFSNNAQELQTDP
FQTEDPFKGADPFKGSDPFQNDPFAEQPPAGADPFGGDPFKESDPFRTSVPEDFFKKAEKSDPFTSDPFLQNSTLPSKPN
LFENSDPFLTLSMSSSKGPDPFGTLDAFGSSTFSTHSSEGFADFSRMSKSQTDVSRRLRSRTYEQPPASDPFSSFGGAGF
SDDPFKTKADTPALPPKKNMPPRPEPPSGKSPPVSQVGSSDFAKPPDPFQPFGADSSDPFQSKKGFGDLFSGRVLFAPSS
SSKPSKDSSRGFADFSSLGNEEQQLAWAKRESEKAEQERLARLRRQEQEDLELAIALTTPYFSWDVVCTSQLTI
Protein IDhabu1_s2279_g08249.t2
Definition-
>habu1_s2279_g08249.t2
MAVLGPLGGGAQLSAGNPLYETYYKQVDPACTGRVGSNDAALFLKKSGLTDAVLGKIWDLADPEGKGFLDKQGFFIALRL
IACAQSGHDVILSNLNLTLPPPKFQDNTSPLLLASTDAHWAVRVEERAKFDGIFESLLPVNGLLSGDKVKPVLMNSKLPL
DVLGRVWDLSDIDKDGHLDRDEFAVAMHLVYRALEKESVPSVLPPSLVPPSKRKKVPIFPGAVPVLPASPPPKDSLRSTP
SHGSVNSLNSTGSLSPKHSLKQTQPSANWVVPLTDKIRYDEIFLKTDLDLDGFVSGQEVKDIFMHSGLSQNLLAHIWALA
DTRQMGKLNKDQFALAMYLIQQKVSKGIDPPQVLLPDMIPPSERTTPVQDSSSSVGSGEFTGVKELDDISQEIAQLQREK
YSLEQDIREREGAIRQKTSEVQELQNDLDRETSSLQELEAQKQDAQDRLDEMDQQKAKLKDMLNDVRQKCQEESQVITSL
KMQIQSQESDLKSQEDDISRAKAELNRLQQEEAQLEQSIQAGKVQLETIIKSLKSTQEEINQARSKLSRLQETLQEANQS
IEQYNEALNGLHSGSMTNLADLNEGNIQKDRGGFGTLDDPFKNKALLFSNNAQELQTDPFQTEDPFKGADPFKGSDPFQN
DPFAEQPPAGADPFGGDPFKESDPFRTSVPEDFFKKAEKSDPFTSDPFLQNSTLPSKPNLFENSDPFLTLSMSSSKGPDP
FGTLDAFGSSTFSTHSSEGFADFSRMSKSQTDVSRRLRSRTYEQPPASDPFSSFGGAGFSDDPFKTKADTPALPPKKNMP
PRPEPPSGKSPPVSQVGSSDFAKPPDPFQPFGADSSDPFQSKKGFGDLFSGRVLFAPSSSSKPSKDSSRGFADFSSLGNE
EQQLAWAKRESEKAEQERLARLRRQEQEDLELAIALTTPYFSWDVVCTSQLTI
Protein IDhabu1_s2279_g08249.t3
Definition-
>habu1_s2279_g08249.t3
MAVLGPLGGGAQLSAGNPLYETYYKQVDPACTGRVGSNDAALFLKKSGLTDAVLGKIWDLADPEGKGFLDKQGFFIALRL
IACAQSGHDVILSNLNLTLPPPKFQDNTSPLLLASTDAHWAVRVEERAKFDGIFESLLPVNGLLSGDKVKPVLMNSKLPL
DVLGRVWDLSDIDKDGHLDRDEFAVAMHLVYRALEKESVPSVLPPSLVPPSKRKKVPIFPGAVPVLPASPPPKDSLRSTP
SHGSVNSLNSTGSLSPKHSLKQTQPSANWVVPLTDKIRYDEIFLKTDLDLDGFVSGQEVKDIFMHSGLSQNLLAHIWALA
DTRQMGKLNKDQFALAMYLIQQKVSKGIDPPQVLLPDMIPPSERTTPVQDSSSSVGSGEFTGVKELDDISQEIAQLQREK
YSLEQDIREREGAIRQKTSEVQELQNDLDRETSSLQELEAQKQDAQDRLDEMDQQKAKLKDMLNDVRQKCQEESQVITSL
KMQIQSQESDLKSQEDDISRAKAELNRLQQEEAQLEQSIQAGKVQLETIIKSLKSTQEEINQARSKLSRLQETLQEANQS
IEQYNEALNGLHSGSMTNLADLNEGNIQKDRGGFGTLDDPFKNKALLFSNNAQELQTDPFQTEDPFKGADPFKGSDPFQN
DPFAEQPPAGADPFGGDPFKESDPFRTSVPEDFFKKAEKSDPFTSDPFLQNSTLPSKPNLFENSDPFLTLSMSSSKGPDP
FGTLDAFGSSTFSTHSSEGFADFSRMSKPPASDPFSSFGGAGFSDDPFKTKADTPALPPKKNMPPRPEPPSGKSPPVSQV
GSSDFAKPPDPFQPFGADSSDPFQSKKGFGDLFSGRVLFAPSSSSKPSKDSSRGFADFSSLGNEEQQLAWAKRESEKAEQ
ERLARLRRQEQEDLELAIALTTPYFSWDVVCTSQLTI

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Okinawa Institute of Science and Technology
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