Gene
| Gene Model ID | habu1_s2279_g08250 |
|---|---|
| Locus | habu1_scaffold2279 : 923309 ... 926628 : - |
| To GenomeBrowser | habu1_scaffold2279:923309..926628 |
| Genes list of scaffold | habu1_scaffold2279 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| krueppel-like factor 2 | GO:0009987 GO:0010468 GO:0010604 GO:0044699 GO:0080090 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2279_g08250.t1 | 3 | 1 | zf-C2H2 | 248 | 272 | 2.0e-15 | 56.0 | 1.3e-07 | 0.00021 | 21.4 |
| habu1_s2279_g08250.t1 | 3 | 1 | zf-C2H2_4 | 248 | 272 | 3.4e-12 | 45.7 | 4.0e-06 | 0.0066 | 16.7 |
| habu1_s2279_g08250.t1 | 2 | 1 | zf-H2C2_2 | 264 | 286 | 1.1e-10 | 41.2 | 1.3e-08 | 2.2e-05 | 24.5 |
| habu1_s2279_g08250.t1 | 3 | 2 | zf-C2H2 | 278 | 302 | 2.0e-15 | 56.0 | 1.9e-07 | 0.00031 | 20.9 |
| habu1_s2279_g08250.t1 | 3 | 2 | zf-C2H2_4 | 278 | 302 | 3.4e-12 | 45.7 | 9.6e-07 | 0.0016 | 18.6 |
| habu1_s2279_g08250.t1 | 2 | 2 | zf-H2C2_2 | 295 | 319 | 1.1e-10 | 41.2 | 3.6e-10 | 6.0e-07 | 29.4 |
| habu1_s2279_g08250.t1 | 3 | 3 | zf-C2H2 | 308 | 330 | 2.0e-15 | 56.0 | 1.2e-08 | 2.0e-05 | 24.6 |
| habu1_s2279_g08250.t1 | 3 | 3 | zf-C2H2_4 | 308 | 330 | 3.4e-12 | 45.7 | 2.2e-07 | 0.00037 | 20.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2279_g08250.t1 | gi|602664355|ref|XP_007437795.1| | PREDICTED: Krueppel-like factor 2 [Python bivittatus] | 0.0 |
| habu1_s2279_g08250.t1 | gi|530565081|ref|XP_005279106.1| | PREDICTED: Krueppel-like factor 2 [Chrysemys picta bellii] | 0.0 |
| habu1_s2279_g08250.t1 | gi|591355560|ref|XP_007072085.1| | PREDICTED: Krueppel-like factor 2 [Chelonia mydas] | 0.0 |
| habu1_s2279_g08250.t1 | gi|558159499|ref|XP_006122514.1| | PREDICTED: Krueppel-like factor 2 [Pelodiscus sinensis] | 0.0 |
| habu1_s2279_g08250.t1 | gi|564230258|ref|XP_006259562.1| | PREDICTED: Krueppel-like factor 2 [Alligator mississippiensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 11.1 |
| Venom grand-1 | 9.1 |
| Pit, infrared sensing | 17.9 |
| Nose | 6.4 |
| Brain-1 | 5.6 |
| Eye | 9.1 |
| fetal fibroblast | 1.5 |
| venom gland-2 | 3.6 |
| Brain-2 | 2.1 |
| Spleen | 46.4 |
| Lung | 29.6 |
| Liver | 2.3 |
| Kidney | 2.1 |
| Pancreas | 1.9 |
| Small intestine | 3.4 |
| Large intestine | 10.2 |
| Stomach | 12.7 |
| heart | 5.6 |
| ovary | 1.3 |
| cheek muscle | 6.4 |
Transcript
| Transcript ID | habu1_s2279_g08250.t1 |
|---|---|
| Definition | - |
>habu1_s2279_g08250.t1 gcttactcggcgcgtcttaaaagctctccgccgccggccaggccttccacagcgctgcagacaagagatcggggcaaccc cgaggcagacatggcgatgccggcctccagcttgccttcgttcgcttctttccgcaaggacagccgcccagcttcccaac aatggtcctgcggattggaagctgcgatgccgttcagccactgccccttgccggacctgaggtcgaggatggagggtgtc gtccctatcagggacgaagagctgagcaccgtgttggatctggtcctctccatgggcagcagcgacaacagcctcacctc ggacatgcctcggggagattacgccagaccggacgatttttacgggatgaattcggcggctggatactacagtccgatgg ggactcgcacgccgactccctacagccccgttttctctcccgagatggatcccgcggagctggaagcgggaaattacgcc cacgggcatttcttcgtgggctgtagctcgcccttcgtggacagtgttaaaccggaacccgaagtggacacttacgagcc tccgccgggcctgggctcccaggtttgcaccaacatcaagcgggagaacgccccggcgccctgtatgctgtctggctctc cccagctgccttgtgcagagacccccccaatgagcccggatgacctgctgatggcctccaagcgccacggacagttgatg cctctcacaccgcagggctaccacccagcctttccccagcctcagtacccccagagagcctccccttatggactctttga tgagagcctcccctgccaggcttcggcctccaggacccttctcaccccacctgcctcacccctggaaatgctggaaacca aaacgaagaggggacgccgctcttcgtcccgtaaacggactgccacgcacacttgcacttacgctggctgtggaaaaacc tacaccaagagctcccacctgaaggcacaccttcgaactcacacaggtgagaaaccctaccactgcaactgggaagggtg cggatggaaatttgctcgctcagatgaactgacccgccattatcggaaacatactgggcatcgtcccttcgagtgtcacc tgtgtgaccggaccttctcccgttctgaccacctggcattgcacatgaagagacacatgtagttttctcacgcctgtggc gtgacctgaagaactctggggatgggggggaaatcttgtagctggtactactatgtctgtcgatggaaagacttggaatg aaccccgacccgaggaagccagtccttccagtgcttcctgaagaggccaagaacctgactgactggtcttctgccatgga agaacaggacttatttataggatggagaagagaccaaactgggcaattgcagctctgagatcaaaagcagacagcacttg aaagaactgcaatgtctaccatgaacaacacgtggaagagtacatatttaaccttacaaccaaatgcatattatttcacc caataattttcccaattgctacttttggctgtgaaacttgggactctgaaaaaggcagaaaaaatgaggatgcctttaaa ctggggtgctggaggtgactattatgcatcccctgtacacaaaaataacaaagaaatcctagtctgaccctcaccaaaaa tattacttgaaactgagattgtcaaacacgagtgtgtcatcacagctgacacactcgaaatgtcaattgtgctgagagtg atcagcagaaaaaaagggggctgccccagcacctgctggctggctactataaaagatgacagagatgaccatggcagacc tgagggacgcagtgatgatccagagtggctgagggtcaaaacagctgcatggctgacaatgacagagaagagacaaaggg ctggctatatgtacatagctgaccatgctcaaaacataagctgtatttgaggactgtaagaggtttactgtagccaaaaa caaaaatttactttctgagacaggaggttctcaccgagaacatgccaaatctatgctgtacactcaaagtgtgcactcaa ggtgccttaaactagaactactgggatacaggtcctgtaaataaacttgtctttggaccggaattgtataaatattgtaa atagttctataatgaagttggaatataaacaggagacaaaataggttttttttctctgcctattcttttgttttaaataa attttctgaaagctgttaaaaaagacttttctaaaataaaataaaataaatttgaattgatgtgtct |
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Protein
| Protein ID | habu1_s2279_g08250.t1 |
|---|---|
| Definition | - |
>habu1_s2279_g08250.t1 MPFSHCPLPDLRSRMEGVVPIRDEELSTVLDLVLSMGSSDNSLTSDMPRGDYARPDDFYGMNSAAGYYSPMGTRTPTPYS PVFSPEMDPAELEAGNYAHGHFFVGCSSPFVDSVKPEPEVDTYEPPPGLGSQVCTNIKRENAPAPCMLSGSPQLPCAETP PMSPDDLLMASKRHGQLMPLTPQGYHPAFPQPQYPQRASPYGLFDESLPCQASASRTLLTPPASPLEMLETKTKRGRRSS SRKRTATHTCTYAGCGKTYTKSSHLKAHLRTHTGEKPYHCNWEGCGWKFARSDELTRHYRKHTGHRPFECHLCDRTFSRS DHLALHMKRHM |
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