Gene
| Gene Model ID | habu1_s2279_g08253 |
|---|---|
| Locus | habu1_scaffold2279 : 1013189 ... 1022791 : + |
| To GenomeBrowser | habu1_scaffold2279:1013189..1022791 |
| Genes list of scaffold | habu1_scaffold2279 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ap-1 complex subunit mu-1 | GO:0006886 GO:0016192 GO:0030131 GO:0032438 GO:0035646 GO:0070062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2279_g08253.t1 | 1 | 1 | Adap_comp_sub | 157 | 421 | 0.0 | 309.1 | 0.0 | 0.0 | 308.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2279_g08253.t1 | gi|602654787|ref|XP_007433200.1| | PREDICTED: AP-1 complex subunit mu-1-like isoform X1 [Python bivittatus] | 0.0 |
| habu1_s2279_g08253.t1 | gi|637378374|ref|XP_003230562.2| | PREDICTED: AP-1 complex subunit mu-1 [Anolis carolinensis] | 0.0 |
| habu1_s2279_g08253.t1 | gi|56119012|ref|NP_001007887.1| | AP-1 complex subunit mu-1 [Gallus gallus] | 0.0 |
| habu1_s2279_g08253.t1 | gi|612013391|ref|XP_007489848.1| | PREDICTED: AP-1 complex subunit mu-1 [Monodelphis domestica] | 0.0 |
| habu1_s2279_g08253.t1 | gi|504172062|ref|XP_004595611.1| | PREDICTED: AP-1 complex subunit mu-1 [Ochotona princeps] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 13.9 |
| Venom grand-1 | 13.2 |
| Pit, infrared sensing | 12.3 |
| Nose | 13.1 |
| Brain-1 | 17.6 |
| Eye | 17.1 |
| fetal fibroblast | 32.1 |
| venom gland-2 | 27.5 |
| Brain-2 | 22.5 |
| Spleen | 14.8 |
| Lung | 11.3 |
| Liver | 12.9 |
| Kidney | 25.0 |
| Pancreas | 14.3 |
| Small intestine | 8.5 |
| Large intestine | 9.0 |
| Stomach | 8.1 |
| heart | 12.0 |
| ovary | 63.1 |
| cheek muscle | 10.4 |
Transcript
| Transcript ID | habu1_s2279_g08253.t1 |
|---|---|
| Definition | - |
>habu1_s2279_g08253.t1 cggggcttctcgtgtgcgggctggtggaggaccgccgtcatgtcggctagcgccgtctatgtattggatctcaagggcaa ggttcttatctgtagaaattaccgtggagatgtggatatgtcagaggtagagcattttatgcctattcttatggagaagg aagaagaagggactctctcacctattctggctcacggaggtgttcgcttcatgtggattaaacacaacaatttatacttg gttgccacttcaaagaagaatgcctgtgtatctcttgtgttctcatttctatacaaggtagttcaggtcttttctgaata tttcaaggaactggaagaagagagcattcgggataattttgtgatcatttatgaactgctagatgagttgatggactttg gatatccccaaaccacagacagtaaaattttacaagaatacataacacaagaaggccacaagctggaaactggagcccca cgccctcctgccactgttacaaatgccgtgtcttggcgttctgaagggatcaagtaccgaaagaatgaagtcttcctgga tgtcatagaatctgttaatcttttggttagtgccaatgggaacgtcctgcgcagtgaaattgttggatccatcaaaatga gggttttcttgtctggaatgccagagcttcgccttggcttgaatgacaaagtcctttttgataatactggccgcggcaag agcaaatctgtggaactggaagatgtgaaattccaccagtgtgttcgtctctctcgttttgaaaatgataggactatttc atttatcccacccgatggggaatttgagctcatgtcctatcgccttaatacccatgtaaagcctctaatttggattgagt cagttatagagaagcattcccatagtcgcatagagtacatgatcaaggccaagagtcagttcaagcgcagatctacagcc aataacgtggagattcacattcctgttcccaatgatgccgattcaccaaagttcaaaaccacagttgggaatgtcaagtg ggttcctgagaacagtgccattgtgtggtccatcaagtcttttccaggagggaaggagtacttgatgagggcccattttg ggctcccgagtgtggaagctgaggacaaagaagggaaacctcccatcagtgtgaagtttgaaatcccatatttcaccaca tctggaattcaggttcgttatttaaaaataattgagaagagtggctaccaggcattgccttgggtccgctacattaccca gaacggagattatcaacttcgaacacaataacgtcagctcatttactgcggccaagaaagtaatcaatatccctggtcag aaatgtttggtgcttgaaggcgtgggccaaggttgtcttgctggctggaagtggaatcaggctgtgtcccatatccagct gtacttggaccagtgtttagtgcagacgtcatgaatgttttttcttcttgttcgccccattcagtgttgtttttgttagg agtagctgttgccttgaaacaaggccaagagccaatcttgggaaaacttggctggtcttatttctttgcttcagaatttg ggggctattcgtcctcctttctgaagttctgtgagtattagctgagctcctcatgccaaccatttgcctgctgatgcgtc taaatgctagttaaactctggtg |
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Protein
| Protein ID | habu1_s2279_g08253.t1 |
|---|---|
| Definition | - |
>habu1_s2279_g08253.t1 MSASAVYVLDLKGKVLICRNYRGDVDMSEVEHFMPILMEKEEEGTLSPILAHGGVRFMWIKHNNLYLVATSKKNACVSLV FSFLYKVVQVFSEYFKELEEESIRDNFVIIYELLDELMDFGYPQTTDSKILQEYITQEGHKLETGAPRPPATVTNAVSWR SEGIKYRKNEVFLDVIESVNLLVSANGNVLRSEIVGSIKMRVFLSGMPELRLGLNDKVLFDNTGRGKSKSVELEDVKFHQ CVRLSRFENDRTISFIPPDGEFELMSYRLNTHVKPLIWIESVIEKHSHSRIEYMIKAKSQFKRRSTANNVEIHIPVPNDA DSPKFKTTVGNVKWVPENSAIVWSIKSFPGGKEYLMRAHFGLPSVEAEDKEGKPPISVKFEIPYFTTSGIQVRYLKIIEK SGYQALPWVRYITQNGDYQLRTQ |
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