Gene
| Gene Model ID | habu1_s2279_g08254 |
|---|---|
| Locus | habu1_scaffold2279 : 1032872 ... 1038618 : - |
| To GenomeBrowser | habu1_scaffold2279:1032872..1038618 |
| Genes list of scaffold | habu1_scaffold2279 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| dynein light chain axonemal | GO:0005875 GO:0007017 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2279_g08254.t3 | 1 | 1 | Dynein_light | 21 | 106 | 5.0e-29 | 100.1 | 1.2e-32 | 5.8e-29 | 99.9 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 10.5 |
| Venom grand-1 | 15.1 |
| Pit, infrared sensing | 10.0 |
| Nose | 22.3 |
| Brain-1 | 5.2 |
| Eye | 9.8 |
| fetal fibroblast | 7.3 |
| venom gland-2 | 5.8 |
| Brain-2 | 4.1 |
| Spleen | 2.7 |
| Lung | 9.8 |
| Liver | 5.4 |
| Kidney | 5.7 |
| Pancreas | 6.1 |
| Small intestine | 4.1 |
| Large intestine | 3.9 |
| Stomach | 4.8 |
| heart | 18.7 |
| ovary | 34.5 |
| cheek muscle | 9.2 |
Transcript
| Transcript ID | habu1_s2279_g08254.t1 |
|---|---|
| Definition | - |
>habu1_s2279_g08254.t1 cacgtttctttccttaacaacggcaaggaggctggctttgggggctcggggtcgaggtgacgcagcataaggtatttttt ccaaaactgacctgaattcacattgctagcctacacgtgactggtttccttcaaaatattctgcccccacttgaagtcac agtggacagataatggcagataccggggaggggaaaaaagaagaagcagattataagagacttcacagcttcccactgat taggcactcagacatgccggaagaaatgcgagtcgaggccatggaattatgtgtcactgcatgtgagaaatatgccacca acaatgagagcgctgccaagatgatcaaagagacaatggacaagaaatttggatcttcctggcatgtagtgattggggaa gggtttggcttcgaaatcacccacgaagtgaagaacttgctgtacatgttctttggaggcagtctagcagtttgtgtttg gaaatgctcctgacacatttttcactattgaagctcactgcaagcaggatacttttttcccagacttttgttttttgtac aatttaaagggcagctttatttttaataacaacaaatattgggctttttcttatttatatgcaagttttatgagatatat ttagtgtgtttatctgtaaatctgtttgagctacctaatccagctcatataagtgttttgattctgattttaccaatgtg tcttcttgcttagaggtgggattgtgcaagagcgattgggtttatgaagccatacattggaggttaggtgtgagaatttt aacccaagtttgctgctacttctccttgctatccttcccactttctgagagcagacctgaaaaagcagctttctttctgt ctggatggcagctgcatggttgagaaacctaagccggtggatggttgctaaaatgatttgcctcgccacctcactacacc taaagagcactgatataatttgtggagcatatggtgcagaaatagagaatattttgcctagcatggggatggggtgggag catcgtaccaatatgttcagaaactggtaatggaaagaacggacctgacctgccagtttcttatacttctaagtacaatt gtacttccattttgtaggctgatgccatcacagaggtgtttgattaacggaatgatcctaattgtattttctatatccct tgttagaatttggaatggaaaggggatttactttttgcaataaaacttttttaaaatgcacgcctg |
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| Transcript ID | habu1_s2279_g08254.t2 |
| Definition | - |
>habu1_s2279_g08254.t2 gaaattcggattttcacttaagcataaggtattttttccaaaactgacctgaattcacattgctagcctacacgtgactg gtttccttcaaaatattctgcccccacttgaagtcacagtggacagataatggcagataccggggaggggaaaaaagaag aagcagattataagagacttcacagcttcccactgattaggcactcagacatgccggaagaaatgcgagtcgaggccatg gaattatgtgtcactgcatgtgagaaatatgccaccaacaatgaggtactgacactaaaacctctgtatttggtgagaca ccagatatgcttcaattaatttttaaccatctctttctaaaaggaaagagcgctgccaagatgatcaaagagacaatgga caagaaatttggatcttcctggcatgtagtgattggggaagggtttggcttcgaaatcacccacgaagtgaagaacttgc tgtacatgttctttggaggcagtctagcagtttgtgtttggaaatgctcctgacacatttttcactattgaagctcactg caagcaggatacttttttcccagacttttgttttttgtacaatttaaagggcagctttatttttaataacaacaaatatt gggctttttcttatttatatgcaagttttatgagatatatttagtgtgtttatctgtaaatctgtttgagctacctaatc cagctcatataagtgttttgattctgattttaccaatgtgtcttcttgcttagaggtgggattgtgcaagagcgattggg tttatgaagccatacattggaggttaggtgtgagaattttaacccaagtttgctgctacttctccttgctatccttccca ctttctgagagcagacctgaaaaagcagctttctttctgtctggatggcagctgcatggttgagaaacctaagccggtgg atggttgctaaaatgatttgcctcgccacctcactacacctaaagagcactgatataatttgtggagcatatggtgcaga aatagagaatattttgcctagcatggggatggggtgggagcatcgtaccaatatgttcagaaactggtaatggaaagaac ggacctgacctgccagtttcttatacttctaagtacaattgtacttccattttgtaggctgatgccatcacagaggtgtt tgattaacggaatgatcctaattgtattttctatatcccttgttagaatttggaatggaaaggggatttactttttgcaa taaaacttttttaaaatgcacgcctg |
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| Transcript ID | habu1_s2279_g08254.t3 |
| Definition | - |
>habu1_s2279_g08254.t3 gaaattcggattttcacttaagcataaggtattttttccaaaactgacctgaattcacattgctagcctacacgtgactg gtttccttcaaaatattctgcccccacttgaagtcacagtggacagataatggcagataccggggaggggaaaaaagaag aagcagattataagagacttcacagcttcccactgattaggcactcagacatgccggaagaaatgcgagtcgaggccatg gaattatgtgtcactgcatgtgagaaatatgccaccaacaatgagagcgctgccaagatgatcaaagagacaatggacaa gaaatttggatcttcctggcatgtagtgattggggaagggtttggcttcgaaatcacccacgaagtgaagaacttgctgt acatgttctttggaggcagtctagcagtttgtgtttggaaatgctcctgacacatttttcactattgaagctcactgcaa gcaggatacttttttcccagacttttgttttttgtacaatttaaagggcagctttatttttaataacaacaaatattggg ctttttcttatttatatgcaagttttatgagatatatttagtgtgtttatctgtaaatctgtttgagctacctaatccag ctcatataagtgttttgattctgattttaccaatgtgtcttcttgcttagaggtgggattgtgcaagagcgattgggttt atgaagccatacattggaggttaggtgtgagaattttaacccaagtttgctgctacttctccttgctatccttcccactt tctgagagcagacctgaaaaagcagctttctttctgtctggatggcagctgcatggttgagaaacctaagccggtggatg gttgctaaaatgatttgcctcgccacctcactacacctaaagagcactgatataatttgtggagcatatggtgcagaaat agagaatattttgcctagcatggggatggggtgggagcatcgtaccaatatgttcagaaactggtaatggaaagaacgga cctgacctgccagtttcttatacttctaagtacaattgtacttccattttgtaggctgatgccatcacagaggtgtttga ttaacggaatgatcctaattgtattttctatatcccttgttagaatttggaatggaaaggggatttactttttgcaataa aacttttttaaaatgcacgcctg |
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Protein
| Protein ID | habu1_s2279_g08254.t1 |
|---|---|
| Definition | - |
>habu1_s2279_g08254.t1 MADTGEGKKEEADYKRLHSFPLIRHSDMPEEMRVEAMELCVTACEKYATNNESAAKMIKETMDKKFGSSWHVVIGEGFGF EITHEVKNLLYMFFGGSLAVCVWKCS |
|
| Protein ID | habu1_s2279_g08254.t2 |
| Definition | - |
>habu1_s2279_g08254.t2 MADTGEGKKEEADYKRLHSFPLIRHSDMPEEMRVEAMELCVTACEKYATNNEVLTLKPLYLVRHQICFN |
|
| Protein ID | habu1_s2279_g08254.t3 |
| Definition | - |
>habu1_s2279_g08254.t3 MADTGEGKKEEADYKRLHSFPLIRHSDMPEEMRVEAMELCVTACEKYATNNESAAKMIKETMDKKFGSSWHVVIGEGFGF EITHEVKNLLYMFFGGSLAVCVWKCS |
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