Gene
| Gene Model ID | habu1_s2279_g08256 |
|---|---|
| Locus | habu1_scaffold2279 : 1061129 ... 1074328 : - |
| To GenomeBrowser | habu1_scaffold2279:1061129..1074328 |
| Genes list of scaffold | habu1_scaffold2279 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2279_g08256.t1 | 1 | 1 | CwfJ_C_1 | 271 | 370 | 3.7e-32 | 110.5 | 9.4e-36 | 7.0e-32 | 109.6 |
| habu1_s2279_g08256.t1 | 1 | 1 | CwfJ_C_2 | 397 | 479 | 1.1e-24 | 86.7 | 2.9e-28 | 2.2e-24 | 85.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2279_g08256.t1 | gi|602654798|ref|XP_007433205.1| | PREDICTED: CWF19-like protein 1-like [Python bivittatus] | 0.0 |
| habu1_s2279_g08256.t1 | gi|557277727|ref|XP_006021950.1| | PREDICTED: CWF19-like protein 1 [Alligator sinensis] | 0.0 |
| habu1_s2279_g08256.t1 | gi|564256507|ref|XP_006267219.1| | PREDICTED: CWF19-like protein 1 [Alligator mississippiensis] | 0.0 |
| habu1_s2279_g08256.t1 | gi|641785396|ref|XP_008174932.1| | PREDICTED: CWF19-like protein 1 [Chrysemys picta bellii] | 0.0 |
| habu1_s2279_g08256.t1 | gi|591381969|ref|XP_007065516.1| | PREDICTED: LOW QUALITY PROTEIN: CWF19-like protein 1-like [Chelonia mydas] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 4.7 |
| Venom grand-1 | 3.7 |
| Pit, infrared sensing | 4.6 |
| Nose | 5.0 |
| Brain-1 | 6.9 |
| Eye | 5.0 |
| fetal fibroblast | 9.2 |
| venom gland-2 | 3.3 |
| Brain-2 | 4.9 |
| Spleen | 3.9 |
| Lung | 4.1 |
| Liver | 3.6 |
| Kidney | 3.7 |
| Pancreas | 3.4 |
| Small intestine | 4.0 |
| Large intestine | 3.8 |
| Stomach | 3.2 |
| heart | 3.9 |
| ovary | 12.7 |
| cheek muscle | 5.8 |
Transcript
| Transcript ID | habu1_s2279_g08256.t1 |
|---|---|
| Definition | - |
>habu1_s2279_g08256.t1 aatggcaaaacagtcccgatacatctcgcgatgtcacgtgacgttgcgactttgacatctcctatacagacatatgtgtt gggtgccaataatgctgaaacagtgcgttattttcctgatatcagcggatgtgaactagctgagaacatcacttatctag gacgcaaaggtatcttcagcggagcttcaggacttcagattgcttatctcagtggagctgaatccacagaagatccagct cctgcacattgttttcgtactaaggatgtgactgatctcaagacttccttgcaatccacctcagaattcaaaggtgtaga catcttgctcacctcttgttggcccaagggggtagagatctttggcaacagcccaggagatgtgaactctaagaaatgtg gttcagggttagtatctttactagctgcaagtttaaagcccagataccattttgctggtcttcagaaaatcaattatgaa aggcttccttataggaaccatgctattcttcaagaaaccgcacaacatgtcagcagattcatcgctctggctgatgttgg caacactgacaagagaaagtatctctacgcgttcagcattcttccaatgaattcaatggatcctgcagaactcatcaaac agccccaggataccaccgagaatccataccgaaagcctggggatggaggttttgcttatgagttaccagatacaaaggag gagcctgctagccaattttttttcgatttaagcaacaagcctaaaggaaagaaacgacctatgaaaggagaagacagaca gccacctaagcggtcacctttcaaggccccattgccgacagctgcctgctggttttgccttgccagcccagatgttgaga agcatttagtggtgaccattggcactcattgctaccttgcccttgccaaagggggcttgtcacctgatcatgtccttatt ttgcccattggacattatcagtcaatggtcgagcttggttcagaagcagtggaagaagttgatcagtacaagtctgtgct gaaaaaattcttcaaatccaaaggaaaaaggtgtgtgatttatgaaaggaattataggagtcaacacctccagctccagg ttgttcctgtacctgagacctgttgtgttactgaagacattaaggaagccttcataagccaagcagaggaacgtcacatt gagttattagagataccagaacattcagctctcaaacaaataattcagccagggacaccgtatttttatgttgaacttga taacggagagaaactcttccatcgtattagcaaaaactttcccttgcagtttggaagggaggtgctggccagtgaggcca tccttggcatgcctgagcgggcagactggagaagctgccagacaggacgggacgaagaaactgctgcagcccaagacttc cgtcaagcctttgagccctttgatttttcccagtcggattgagtatctgaatggaagtgggaaagctctcttgaacagct ttcctttgaagcttcctgtccagccagaggaagtttgcatgggttggagttcacctttcctgctggctaggtcatgaagg aaggccttttatatgacgggaaccagtgcttccaatgaagattatttatgaagtcttgctgggactcattttgtctgcac ttactgacctgtggcttccagaaggccttcagaagacatgcagaaggccttcagaagacatgcaaaagattttcttttgc agctgacctctctattccagccagtcagttcaggagctatgaatcctcctagattggggaggtagtttaaatcctctgac attggaggtaaatttgcacagtgtgcatcacacagtaccccaagttcttgtgctctggcagtaaatcactactatccagg tcatgcacaaaaagagaagaatacaatctttgaaagcagtggaagcctcggcactctgctgtataaatggagaggggggg ggtgagaaggctagtgctggttgcaaactgattgtgcaaaggggaaaaaacatgcacaggcaaggagcatttgacaatgt gttttatgaaaataagggaagtcagatgtgcagtgcagataagtaatcactgttgactcaagttttctgttcatttccaa atttaactgtcaggtggttgggattttaaataactacatatatattgggagagagagagagattgtgaatcgtaatgtca agcaagctactggcttaatgaacagacttggagagtggttaaaatattttaatggtttggtcaaatgaatatttttaatg agaatgattttttttatatgtgaaaagtatttttttttatatgtgaaatattttcttgtcatgagctgctggttagcttt atcagccgggaatacagtcatctatatgagctcagttaaacttttcaacaaatctgttacttttgaggaagtgatcgtga tttatggggaaattataagatctcatatattacagtaatagagtcatatgggtccgtttcttatggtttacttacaaatt ctcaaatatgacaaagcagccttttaatttacttctttcagtaatttccttggacaccttattcagcctaggaatccaaa ttaaagtttctccaataaatagcaatgtggtcttgtagcatccagtgaaggaacgcttctttctaattaattggtttcat tgttgaactgttcctaatgttaaagcattcagccaaaacgagcttatggacattgggggtgatatgctcatatttcaatt aggacagaagttaaaatgatctactcactggtcttctccgttttaatatatggctacaagaggtagactttgcacaaaag taaaagttttgaactatcatgctgaa |
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Protein
| Protein ID | habu1_s2279_g08256.t1 |
|---|---|
| Definition | - |
>habu1_s2279_g08256.t1 MSRDVATLTSPIQTYVLGANNAETVRYFPDISGCELAENITYLGRKGIFSGASGLQIAYLSGAESTEDPAPAHCFRTKDV TDLKTSLQSTSEFKGVDILLTSCWPKGVEIFGNSPGDVNSKKCGSGLVSLLAASLKPRYHFAGLQKINYERLPYRNHAIL QETAQHVSRFIALADVGNTDKRKYLYAFSILPMNSMDPAELIKQPQDTTENPYRKPGDGGFAYELPDTKEEPASQFFFDL SNKPKGKKRPMKGEDRQPPKRSPFKAPLPTAACWFCLASPDVEKHLVVTIGTHCYLALAKGGLSPDHVLILPIGHYQSMV ELGSEAVEEVDQYKSVLKKFFKSKGKRCVIYERNYRSQHLQLQVVPVPETCCVTEDIKEAFISQAEERHIELLEIPEHSA LKQIIQPGTPYFYVELDNGEKLFHRISKNFPLQFGREVLASEAILGMPERADWRSCQTGRDEETAAAQDFRQAFEPFDFS QSD |
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