Gene
| Gene Model ID | habu1_s2279_g08258 |
|---|---|
| Locus | habu1_scaffold2279 : 1077109 ... 1086807 : + |
| To GenomeBrowser | habu1_scaffold2279:1077109..1086807 |
| Genes list of scaffold | habu1_scaffold2279 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2279_g08258.t1 | 1 | 1 | Band_7 | 39 | 280 | 3.9e-12 | 46.4 | 9.5e-16 | 1.4e-11 | 44.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2279_g08258.t1 | gi|602654802|ref|XP_007433207.1| | PREDICTED: erlin-1-like isoform X1 [Python bivittatus] | 0.0 |
| habu1_s2279_g08258.t1 | gi|697031378|ref|XP_009577783.1| | PREDICTED: erlin-1 [Fulmarus glacialis] | 0.0 |
| habu1_s2279_g08258.t1 | gi|686594664|ref|XP_009273335.1| | PREDICTED: erlin-1 [Aptenodytes forsteri] | 0.0 |
| habu1_s2279_g08258.t1 | gi|705674542|ref|XP_010116335.1| | PREDICTED: erlin-1 [Chlamydotis macqueenii] | 0.0 |
| habu1_s2279_g08258.t1 | gi|719751034|ref|XP_010212968.1| | PREDICTED: erlin-1 [Tinamus guttatus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 17.6 |
| Venom grand-1 | 16.6 |
| Pit, infrared sensing | 14.1 |
| Nose | 14.2 |
| Brain-1 | 6.3 |
| Eye | 10.3 |
| fetal fibroblast | 22.3 |
| venom gland-2 | 18.7 |
| Brain-2 | 5.8 |
| Spleen | 9.9 |
| Lung | 12.9 |
| Liver | 40.3 |
| Kidney | 22.9 |
| Pancreas | 17.9 |
| Small intestine | 18.1 |
| Large intestine | 10.9 |
| Stomach | 9.0 |
| heart | 11.4 |
| ovary | 20.1 |
| cheek muscle | 19.9 |
Transcript
| Transcript ID | habu1_s2279_g08258.t1 |
|---|---|
| Definition | - |
>habu1_s2279_g08258.t1 ggccacttgcggggtgtgagcggcgggaggatgcctggaagcggcagcgagattctgaccaggagccggaggcgcggacc ggccgtttcagtagcagtgacggccggcctgttgctgtcgctggtgctctgggcctcggtccacaaggtggaggagggac acctggctgtctactacagaggaggtgcactgctctcttccctgagtggaccaggctatcacatcatgctcccaattctc acaacttacagaacagtacagacaacattgcacacagatgaagtgaaaaatgtgccttgtgggacaagtggtggtgtcat gatctatattgaccgaattgaggtgatgaatgtgctggcaccgtatgcagtttatgacactgtgaggaattatactgccg attatgacaaggcactcatcttcaataagatccatcatgaactcaaccagttttgcagcgtccatacgctgcaggaggtg tacattgacctctttgatcagattgatgaaaacctgaagctagcactacagcaggaactgaatagcatggcaccaggcct tatcatccaggtactacctatcacatgcctgctgcaaatctgtgtgagtgatgggaagagattgaaacagaacactggct gggaaggtcgcagatgggaagcagagaagactaaactcttgatagctacacagaagcagaaagtggtggaaaaggaggct gaaacggaaaagaggaaggcaattatagaagcagagaaaattgctgaagtggcaaagatacagtacaaacagaaggtcat ggagactttgacagagaaacgaatttctgagcttgaagatgctgcttatttagcaagacagaaagcaaaggctgatgcag aatactacacagcccaaaaagcagctgactcaaacaagctgaaactcacaccagcctacctggagctgatgaaataccaa gcaatcgctactaacagcaagctatactttggcagtagcctgccctctcacttgtttctaggttcctgggcgatcgaaca catgattgcaaggactgctaaagaaggtcatcttgtctcagaaacaaggaaacaccacctcagggctcaagaaagtgcta cttgatgctcgcaccatgtagcgtcattgatctgaacattaaagtaaccaactgctcaaaatcag |
|
Protein
| Protein ID | habu1_s2279_g08258.t1 |
|---|---|
| Definition | - |
>habu1_s2279_g08258.t1 MPGSGSEILTRSRRRGPAVSVAVTAGLLLSLVLWASVHKVEEGHLAVYYRGGALLSSLSGPGYHIMLPILTTYRTVQTTL HTDEVKNVPCGTSGGVMIYIDRIEVMNVLAPYAVYDTVRNYTADYDKALIFNKIHHELNQFCSVHTLQEVYIDLFDQIDE NLKLALQQELNSMAPGLIIQVLPITCLLQICVSDGKRLKQNTGWEGRRWEAEKTKLLIATQKQKVVEKEAETEKRKAIIE AEKIAEVAKIQYKQKVMETLTEKRISELEDAAYLARQKAKADAEYYTAQKAADSNKLKLTPAYLELMKYQAIATNSKLYF GSSLPSHLFLGSWAIEHMIARTAKEGHLVSETRKHHLRAQESAT |
|