Gene
| Gene Model ID | habu1_s2279_g08259 |
|---|---|
| Locus | habu1_scaffold2279 : 1090295 ... 1105238 : - |
| To GenomeBrowser | habu1_scaffold2279:1090295..1105238 |
| Genes list of scaffold | habu1_scaffold2279 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| gamma-tubulin complex component 2 | GO:0000226 GO:0000922 GO:0005813 GO:0016020 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2279_g08259.t1 | 1 | 1 | Spc97_Spc98 | 225 | 743 | 0.0 | 419.2 | 0.0 | 0.0 | 419.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2279_g08259.t1 | gi|602654808|ref|XP_007433209.1| | PREDICTED: gamma-tubulin complex component 2 [Python bivittatus] | 0.0 |
| habu1_s2279_g08259.t1 | gi|669278337|ref|XP_008631509.1| | PREDICTED: gamma-tubulin complex component 2 [Corvus brachyrhynchos] | 0.0 |
| habu1_s2279_g08259.t1 | gi|541991457|ref|XP_005446308.1| | PREDICTED: gamma-tubulin complex component 2 [Falco cherrug] | 0.0 |
| habu1_s2279_g08259.t1 | gi|558177160|ref|XP_006126422.1| | PREDICTED: gamma-tubulin complex component 2 isoform X4 [Pelodiscus sinensis] | 0.0 |
| habu1_s2279_g08259.t1 | gi|558177156|ref|XP_006126421.1| | PREDICTED: gamma-tubulin complex component 2 isoform X3 [Pelodiscus sinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 7.7 |
| Venom grand-1 | 4.7 |
| Pit, infrared sensing | 6.5 |
| Nose | 8.6 |
| Brain-1 | 9.6 |
| Eye | 7.6 |
| fetal fibroblast | 15.8 |
| venom gland-2 | 5.2 |
| Brain-2 | 9.4 |
| Spleen | 4.5 |
| Lung | 4.7 |
| Liver | 2.3 |
| Kidney | 5.5 |
| Pancreas | 3.3 |
| Small intestine | 2.9 |
| Large intestine | 3.9 |
| Stomach | 3.4 |
| heart | 10.9 |
| ovary | 53.5 |
| cheek muscle | 9.4 |
Transcript
| Transcript ID | habu1_s2279_g08259.t1 |
|---|---|
| Definition | - |
>habu1_s2279_g08259.t1 atggccctgccttgcagggttgttgttactgctctggtgaagccctgaatgccgctttctattcattatgagcgagtttc ggattcatcacgacgtgaacgagctcctgagcctgctgcgagtgcggggcggcggggaaggggcggaggtctacatcgac ctgctccagaagaaccgcgccccttatctcaccaccaccgcctcagccctcggagccaaggttaaaattgcagagttttc acggactccagaagatttcttaaacaaatatgatgaactaaaatcgaagaacacaagacatcttgattcacttgtgtatt tgctgtccaagcttacagaagacaaagagactttgcaatacttgcaacagaatgcaaaggaaagggcagaacttgcagca aatgcagcagccagtaacagtggtagcagcagcctcgctttctctgtcccctcaacaacttctaaaatgactgttcaaga actagaggagttacggaaacagctgggcactgtcacaactggctccagctcacagcagtctcttgaacttgtacgaaagg cactccgagaaaagcagaacaagaaaaactctggccagcctatcccatcattcccttcctgggtgtatgaaagaccagct cttattggagactttctctctagctctagtttaagtacagatacaactgtgccaataggtacattaccattggcagccca agagtctgcagttgtagaagacttgctatatgttttgataggtgtggacggcagatacatcacagcacaaccccttgttg gtcgagagaatcgtacttttctagtggatcccaatctagatatgtcagttaaggaactggtcactagaatcctccctgtt gctgcaagttactccataatatccaggtttgtagaagagaaatcgtcctttgaatacggacaagtaaatcatgcattggc agcagcaatgaggacccttattaaagagtacatgatcctgataacccaactggaacatctccagcgccaaggactcctct cattgcagaagctttggttttatatccagcccacaatgaggaccatggaaatcttggcttctcttgctacttcgatagac aagggcgaatgcatgggaggttcaaccctcagcctactccatgacaaaacattcaattatacaggggacagccaagccca ggagctgtgcctctatttaaccaaagctgccagtgttccatactttgaaatattggagaaatggatctacagaggcatca tcaacgatccttatagtgaattcatggtggaggaacatgaacttcaaaaggaaaagatccaggaggactataatgataag tactgggatcaaagatataccattgtccagcaacagattccctccttcctgcaaaaggttgctgataaaatacttagcac aggaaagtacttaaatgtggtccgggaatgtggccataatgttacttgcccagtggcaaaggaggtcgtttatactttga aggagcgtgaatatgtggaacagatagagaaggcctataattatgccagcaaagtcttgcttgatttcctgatggatgaa aaggagcttgtggcccacttaaggtccatcaaacactactttcttatggaccaaggtgacttttatgtccatttcatgga tttgacagaagaggagttgaaaaaacctgtagacgatatcattccgactagattggaagctcttctagaattagcattac gtatgagcacagctaacaccgacccatttaaagatgatttaaaggttgacttgatgccacatgatctcataactcaactc ttgcgagttctggccattgagacaaagcaggagaaggcaattatcaacgctgatccaacggagctctctctcagtggcct cgaagcattttcttttgattacattgtgaaatggccattgtctctcatcatcaacagaaaagccttaacacggtaccaga tgctcttcagacacatgttttattgtaaacatgtggagcggcagctgtgcaacgtctggatcagcagcaaaacagctaag cagtgttcactacattcatcaaaatggtttgcaggtgcttttactctgcgtcagcggatgctcaattttgtgcagaatat ccaatactatatgatgtttgaagtgatggaacccacatggcatattttggagaagaatctgaagttggcctccaatattg atgatgtcttgagccaccacacgagcttcttggataattgcttgaaggactgcatgcttaccaacccagagttactgaag attttttccaagctgatgtctgtgtgtgtcatgttcaccaattgcatgcagagattttcccacagcatgaagttagataa tgaaatggaccggctcaccgtagagcatgggactatgagaggcccacctactaaacaggaacgagtagaggaatccacaa gaaagcagcttgctaacaagcttttagcagagcaggcagattccttgcatgtaagttctggctttgaggcaacaataaac aagtttgatagcaatttctctgcacatctcctggacctcctggacaaactgagcatttacagtaccaatgactgtgagca cagcatgatcaatatcatctacagactggacttcaacggcttctacacagaacgcctggagcatatgtctgcagaaagga gccagaagactgtgttgcatgtggcccctcctcccagggttgctgtccccactcagtgaaaggccttgtctttatgaaag tcattttctcaaaagtgggaagagctgggggctgcgttgagaacgacatggtttcatcaacgcttgtgccgtgcaaaaaa ttgtaaacagcggtggaagcataaaatacagactctagcaacaacagtgtgtataaaggattgtgactctgaatgcttct atatttttaaatccaagcatttgaattctagattctctgtattataggtgaaaaatagtgtttctaaggagcatctttga tctttaaaaatgtacttttatatgttcgtgttttaagtcctggctaactaatgactgctcagttcagtcaaggaatagga ttgtgccatctattttgagaagatatcaacgatttggagtagaatcaatattattacatgaactttcatggacactgttc actgctactgaccaagttatgttagtatttgcatttttgtcgagagttaaccatctcctgttgtgtgcactccatttaga taaagcttcattaaatttaatcaattttgtctgggtt |
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Protein
| Protein ID | habu1_s2279_g08259.t1 |
|---|---|
| Definition | - |
>habu1_s2279_g08259.t1 MSEFRIHHDVNELLSLLRVRGGGEGAEVYIDLLQKNRAPYLTTTASALGAKVKIAEFSRTPEDFLNKYDELKSKNTRHLD SLVYLLSKLTEDKETLQYLQQNAKERAELAANAAASNSGSSSLAFSVPSTTSKMTVQELEELRKQLGTVTTGSSSQQSLE LVRKALREKQNKKNSGQPIPSFPSWVYERPALIGDFLSSSSLSTDTTVPIGTLPLAAQESAVVEDLLYVLIGVDGRYITA QPLVGRENRTFLVDPNLDMSVKELVTRILPVAASYSIISRFVEEKSSFEYGQVNHALAAAMRTLIKEYMILITQLEHLQR QGLLSLQKLWFYIQPTMRTMEILASLATSIDKGECMGGSTLSLLHDKTFNYTGDSQAQELCLYLTKAASVPYFEILEKWI YRGIINDPYSEFMVEEHELQKEKIQEDYNDKYWDQRYTIVQQQIPSFLQKVADKILSTGKYLNVVRECGHNVTCPVAKEV VYTLKEREYVEQIEKAYNYASKVLLDFLMDEKELVAHLRSIKHYFLMDQGDFYVHFMDLTEEELKKPVDDIIPTRLEALL ELALRMSTANTDPFKDDLKVDLMPHDLITQLLRVLAIETKQEKAIINADPTELSLSGLEAFSFDYIVKWPLSLIINRKAL TRYQMLFRHMFYCKHVERQLCNVWISSKTAKQCSLHSSKWFAGAFTLRQRMLNFVQNIQYYMMFEVMEPTWHILEKNLKL ASNIDDVLSHHTSFLDNCLKDCMLTNPELLKIFSKLMSVCVMFTNCMQRFSHSMKLDNEMDRLTVEHGTMRGPPTKQERV EESTRKQLANKLLAEQADSLHVSSGFEATINKFDSNFSAHLLDLLDKLSIYSTNDCEHSMINIIYRLDFNGFYTERLEHM SAERSQKTVLHVAPPPRVAVPTQ |
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