Gene
| Gene Model ID | habu1_s2279_g08260 |
|---|---|
| Locus | habu1_scaffold2279 : 1105629 ... 1110189 : + |
| To GenomeBrowser | habu1_scaffold2279:1105629..1110189 |
| Genes list of scaffold | habu1_scaffold2279 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| zinc finger protein 511 | GO:0046872 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2279_g08260.t1 | 2 | 1 | zf-C2H2 | 22 | 47 | 3.7e-08 | 33.2 | 6.5e-06 | 0.032 | 14.5 |
| habu1_s2279_g08260.t1 | 2 | 2 | zf-C2H2 | 50 | 72 | 3.7e-08 | 33.2 | 1.4e-06 | 0.007 | 16.6 |
| habu1_s2279_g08260.t1 | 1 | 1 | zf-C2H2_4 | 86 | 111 | 1.7e-08 | 34.2 | 6.7e-06 | 0.033 | 14.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2279_g08260.t1 | gi|602654812|ref|XP_007433210.1| | PREDICTED: zinc finger protein 511 [Python bivittatus] | 0.0 |
| habu1_s2279_g08260.t1 | gi|727056559|ref|XP_010406985.1| | PREDICTED: zinc finger protein 511 [Corvus cornix cornix] | 0.0 |
| habu1_s2279_g08260.t1 | gi|525000814|ref|XP_005048140.1| | PREDICTED: zinc finger protein 511 [Ficedula albicollis] | 0.0 |
| habu1_s2279_g08260.t1 | gi|669278363|ref|XP_008631524.1| | PREDICTED: zinc finger protein 511 [Corvus brachyrhynchos] | 0.0 |
| habu1_s2279_g08260.t1 | gi|700323338|ref|XP_009928242.1| | PREDICTED: zinc finger protein 511, partial [Haliaeetus albicilla] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 2.8 |
| Venom grand-1 | 3.2 |
| Pit, infrared sensing | 3.4 |
| Nose | 3.4 |
| Brain-1 | 3.2 |
| Eye | 2.7 |
| fetal fibroblast | 3.8 |
| venom gland-2 | 4.0 |
| Brain-2 | 3.5 |
| Spleen | 3.4 |
| Lung | 4.2 |
| Liver | 3.0 |
| Kidney | 3.7 |
| Pancreas | 1.4 |
| Small intestine | 3.3 |
| Large intestine | 3.5 |
| Stomach | 3.4 |
| heart | 7.4 |
| ovary | 7.3 |
| cheek muscle | 7.7 |
Transcript
| Transcript ID | habu1_s2279_g08260.t1 |
|---|---|
| Definition | - |
>habu1_s2279_g08260.t1 cgcagaccatcccttcttcgaggacggcgacgtccatcggcatatgtacctccaaggtctcctggagaacgtcgcgaggg acaccgaaaggcccagaacctctgaattttcttgtcaaattggtggatgcagccaggttttcaacaccttggagagctac gagcatcattacaacatgctgcacaggaatgtgtgttcttcttgcaaacgatccttcccttcaacacatttgttagatgt tcacattttggagtggcatgattccctcttccagataatggcagagaagcagaatatgtaccagtgcttggtagagagct gtccagagaaattcaaaagcagtaaagatcgcaaagatcacttaatcacagttcatcagtatccatctgattttcgcttt gataaatccctgaaagcacaaaggaaagagaaaatgaggccttcatcaaaagaaagcaacgtgccaatggatatgactgt ggaagacccagaacaattacatgtggaggccatggaaacaggtccagatgagagtgtaatggaaagtgacattcagtctg agactgagtgtacggtggactctccagcatttggaaaatggctctatagatcaagaattcctcccgctatttgttttggg caaggggctacccgggtcttcaaaggcagaaaaaagaaaagttgaatatgacaaccaggaggaatttcatcagcagaaaa gtgcctttaaaaaaaaaaaagttgataacacttttatttcagttcttagaagtattcctagttttaggcaccccttctca atttctgcacaacatcctccacatggctcaaattcagaaaaaaccccactacggactttgaataaagcagttgtttccaa ggtaaggg |
|
Protein
| Protein ID | habu1_s2279_g08260.t1 |
|---|---|
| Definition | - |
>habu1_s2279_g08260.t1 MYLQGLLENVARDTERPRTSEFSCQIGGCSQVFNTLESYEHHYNMLHRNVCSSCKRSFPSTHLLDVHILEWHDSLFQIMA EKQNMYQCLVESCPEKFKSSKDRKDHLITVHQYPSDFRFDKSLKAQRKEKMRPSSKESNVPMDMTVEDPEQLHVEAMETG PDESVMESDIQSETECTVDSPAFGKWLYRSRIPPAICFGQGATRVFKGRKKKS |
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