Gene
| Gene Model ID | habu1_s2279_g08262 |
|---|---|
| Locus | habu1_scaffold2279 : 1472649 ... 1589102 : + |
| To GenomeBrowser | habu1_scaffold2279:1472649..1589102 |
| Genes list of scaffold | habu1_scaffold2279 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2279_g08262.t1 | 5 | 1 | LRR_8 | 69 | 125 | 0.0 | 161.3 | 6.7e-14 | 7.1e-11 | 41.7 |
| habu1_s2279_g08262.t1 | 1 | 1 | LRR_5 | 78 | 208 | 1.3e-13 | 50.7 | 3.3e-16 | 3.5e-13 | 49.3 |
| habu1_s2279_g08262.t1 | 5 | 2 | LRR_8 | 113 | 173 | 0.0 | 161.3 | 5.3e-16 | 5.6e-13 | 48.4 |
| habu1_s2279_g08262.t1 | 3 | 1 | LRR_4 | 114 | 153 | 5.6e-20 | 70.5 | 2.2e-09 | 2.3e-06 | 27.0 |
| habu1_s2279_g08262.t1 | 5 | 3 | LRR_8 | 137 | 197 | 0.0 | 161.3 | 2.6e-16 | 2.7e-13 | 49.4 |
| habu1_s2279_g08262.t1 | 5 | 4 | LRR_8 | 163 | 221 | 0.0 | 161.3 | 5.6e-16 | 5.9e-13 | 48.3 |
| habu1_s2279_g08262.t1 | 3 | 2 | LRR_4 | 163 | 201 | 5.6e-20 | 70.5 | 2.1e-08 | 2.2e-05 | 23.9 |
| habu1_s2279_g08262.t1 | 5 | 5 | LRR_8 | 186 | 227 | 0.0 | 161.3 | 4.4e-10 | 4.6e-07 | 29.4 |
| habu1_s2279_g08262.t1 | 3 | 3 | LRR_4 | 186 | 226 | 5.6e-20 | 70.5 | 2.7e-08 | 2.9e-05 | 23.5 |
| habu1_s2279_g08262.t1 | 1 | 1 | Ig_3 | 301 | 375 | 7.2e-09 | 36.0 | 2.0e-11 | 2.1e-08 | 34.5 |
| habu1_s2279_g08262.t1 | 1 | 1 | I-set | 302 | 388 | 5.5e-15 | 54.9 | 1.1e-17 | 1.2e-14 | 53.9 |
| habu1_s2279_g08262.t1 | 1 | 1 | Ig_2 | 311 | 388 | 1.1e-08 | 35.0 | 2.6e-11 | 2.8e-08 | 33.7 |
| habu1_s2279_g08262.t1 | 1 | 1 | ig | 315 | 372 | 3.4e-06 | 27.0 | 9.5e-09 | 1.0e-05 | 25.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2279_g08262.t1 | gi|602654634|ref|XP_007433138.1| | PREDICTED: leucine-rich repeat and fibronectin type-III domain-containing protein 5-like [Python bivittatus] | 0.0 |
| habu1_s2279_g08262.t1 | gi|699705251|ref|XP_009892180.1| | PREDICTED: leucine-rich repeat and fibronectin type-III domain-containing protein 5 isoform X2 [Charadrius vociferus] | 0.0 |
| habu1_s2279_g08262.t1 | gi|729762118|ref|XP_010578033.1| | PREDICTED: leucine-rich repeat and fibronectin type-III domain-containing protein 5 isoform X2 [Haliaeetus leucocephalus] | 0.0 |
| habu1_s2279_g08262.t1 | gi|529431862|ref|XP_005235728.1| | PREDICTED: leucine-rich repeat and fibronectin type-III domain-containing protein 5-like isoform X2 [Falco peregrinus] | 0.0 |
| habu1_s2279_g08262.t1 | gi|557287166|ref|XP_006026308.1| | PREDICTED: leucine-rich repeat and fibronectin type-III domain-containing protein 5-like [Alligator sinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 1.1 |
| Venom grand-1 | 0.1 |
| Pit, infrared sensing | 0.8 |
| Nose | 1.5 |
| Brain-1 | 5.5 |
| Eye | 2.4 |
| fetal fibroblast | 1.9 |
| venom gland-2 | 0.0 |
| Brain-2 | 7.2 |
| Spleen | 0.8 |
| Lung | 0.2 |
| Liver | 0.0 |
| Kidney | 0.1 |
| Pancreas | 0.2 |
| Small intestine | 0.1 |
| Large intestine | 0.1 |
| Stomach | 0.2 |
| heart | 0.6 |
| ovary | 3.2 |
| cheek muscle | 0.0 |
Transcript
| Transcript ID | habu1_s2279_g08262.t1 |
|---|---|
| Definition | - |
>habu1_s2279_g08262.t1 gaccccaacattgctgaccggcgcctcttacctctaggatgcggcggcggctgctgctaagcgaagcactggagcaggga cgtggaaggcggccgtgggagaaggagctccccgggcggtcggattccccgggaggtagcaggatcctgaccctgttcta caatggaaaaactgcttctatatctgttcttcattggcttaggctattgtttgtccctcctgacattgataggaagacag tagagttgcggctggcagacaactttgttacaaatatcaagcggaaagatttcgccaacatgaccagcctggtcgacttg acactgtctaggaatacaattagtttcatcacccctcatgcatttgctgacttgcgcaacctgagggctttgcacttgaa cagtaaccgattgactaaaatcacccatgacatgctaagtgggctttccaatctgcatcatttgatattgaacaataacc agctgacaatgatctcttccactgcttttgacgacgtcttggctcttgaggagttggatttgtcctacaacaacctggag accatcccctgggatgctgttgagaagatgatcagcttgcacaccctcagtttggaccacaatatgatcaacaacattcc caaggggacgttctcccacctccacaagatgacccggctggacgtcacgtccaacaaactgcataagctgccgcctgacc ctctcttccagcgagctcaggttttagccacctcaggaatcatcagcccatccacatttgcactgagctttggagggaac cctcttcattgcaattgtgaacttttgtggctgagacgcctttccagggaggatgacctggagacatgtgcttcaccttc tgttctgtctggccgctatttctggtcggtccccgaggaggagttcctgtgtgaaccccccctcattactaggcacacgc atgagctcagagtgctagagggccaaagagccatcctgagatgtaaagcccgtggtgaccccgagcctgctatacattgg atttccccagaaggcaagctgatttctaatgcaacccggtctctggtgtatgacaacggaacacttgacattcatatcac gaccatgaaggatacaggctctttcacctgtattgcttccaacccagcgggggaagacacccagtctgtagatcttcaca taatcaaactgcctcacatagtaaacagcacaaaccacatccatgagccagatcctggctcctcggatatatcaacttcg accaaatctggctcaaatgcaagcagtagcaacggggaaacaaaaattagccaggacaagaaggtggtgatagcagaagc cacatcatccactgccctgcttaaatttaatttccaaaggaatatacccgggatacgtatgttccaaattcagtataatg gaacatatgatgattcgcttgtttacagaatgatacctcccatgagcaagaccttcctggtcaacaatttggctgcgggg acgatgtacgacttgtgtgtcttagcaatctatgacgatggcatcacctccttgacagctactcgtgtggtggggtgcac ccagttcacgacagagcaggactacgtgcgctgccatttcatgcagtcccagttcctgggtgggaccatgatcatcataa tcggagggattatcgtggcttctgtcctggtcttcatcatcatcctcatgattcgctataaggtgtgtaacaacggcggg caccacaaggtgaccaaggtcagcaacgtttactcccagaccaacggggctcaggcccaggggtgcagtggagccgtcat gccccagtctgggtccaagcaggccgtggggcgtgaggagagcctgcagtgctgcaaagtcagcaacgacagtgtggcac agtcgtcggaagcctgctgcagccaggactcctccactgctacctcctctttgcctcccatgtggactcctggccctccc acttcccaaaagctgaagcgtaagcccatgccaaagcccagcagtgatcctccaccgccgagcgaaggcgccgctaccag cctagaatcccagaacactaatcgcaacaactcaactgctctgcagttggctagccaaaccccagactatgccaaagggg gctcccagtacaaaagagcacaagccaagtcaaaagctggcagtagcctgaagagtgcttgcctgcctcctcagcctcct gaaaacgtggccactaatgtttgcacgcgacaaaaatccattcgatttcaactcaccgaagattgatagggccaaatttt gctccaccagcaggaacttcacacctggtgcctcaggcctgcttcgagaatccagagaccagagatgctggagtcttccc catttttctttgtggaattcctttcccccttttcctcttttcttttctccacccaaatcctcccagcaagtgtctttttc tggccttcaggactttttgggggcggggagggagtctggtgaagcaaacaacagagagagggagctgagctgaaccctga cctctgttttccatatttgtggtttctggtggtggtggtggttgaattcacaaactgtaaaatgctccattatgtcacac cacccctcaaaataaatgttttaatatgagcatttgca |
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Protein
| Protein ID | habu1_s2279_g08262.t1 |
|---|---|
| Definition | - |
>habu1_s2279_g08262.t1 MRRRLLLSEALEQGRGRRPWEKELPGRSDSPGGSRILTLFYNGKTASISVLHWLRLLFVPPDIDRKTVELRLADNFVTNI KRKDFANMTSLVDLTLSRNTISFITPHAFADLRNLRALHLNSNRLTKITHDMLSGLSNLHHLILNNNQLTMISSTAFDDV LALEELDLSYNNLETIPWDAVEKMISLHTLSLDHNMINNIPKGTFSHLHKMTRLDVTSNKLHKLPPDPLFQRAQVLATSG IISPSTFALSFGGNPLHCNCELLWLRRLSREDDLETCASPSVLSGRYFWSVPEEEFLCEPPLITRHTHELRVLEGQRAIL RCKARGDPEPAIHWISPEGKLISNATRSLVYDNGTLDIHITTMKDTGSFTCIASNPAGEDTQSVDLHIIKLPHIVNSTNH IHEPDPGSSDISTSTKSGSNASSSNGETKISQDKKVVIAEATSSTALLKFNFQRNIPGIRMFQIQYNGTYDDSLVYRMIP PMSKTFLVNNLAAGTMYDLCVLAIYDDGITSLTATRVVGCTQFTTEQDYVRCHFMQSQFLGGTMIIIIGGIIVASVLVFI IILMIRYKVCNNGGHHKVTKVSNVYSQTNGAQAQGCSGAVMPQSGSKQAVGREESLQCCKVSNDSVAQSSEACCSQDSST ATSSLPPMWTPGPPTSQKLKRKPMPKPSSDPPPPSEGAATSLESQNTNRNNSTALQLASQTPDYAKGGSQYKRAQAKSKA GSSLKSACLPPQPPENVATNVCTRQKSIRFQLTED |
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