Gene
| Gene Model ID | habu1_s2318_g08419 |
|---|---|
| Locus | habu1_scaffold2318 : 1790 ... 71395 : - |
| To GenomeBrowser | habu1_scaffold2318:1790..71395 |
| Genes list of scaffold | habu1_scaffold2318 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2318_g08419.t1 | 1 | 1 | NRDE | 87 | 160 | 4.5e-08 | 32.7 | 3.4e-12 | 5.0e-08 | 32.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2318_g08419.t1 | gi|602642017|ref|XP_007427804.1| | PREDICTED: transport and Golgi organization protein 2 homolog isoform X2 [Python bivittatus] | 2.0e-14 |
| habu1_s2318_g08419.t1 | gi|641704101|ref|XP_008140820.1| | PREDICTED: transport and Golgi organization protein 2 homolog isoform X3 [Eptesicus fuscus] | 2.0e-14 |
| habu1_s2318_g08419.t1 | gi|558210482|ref|XP_006107525.1| | PREDICTED: transport and Golgi organization protein 2 homolog isoform X3 [Myotis lucifugus] | 3.0e-14 |
| habu1_s2318_g08419.t1 | gi|602642015|ref|XP_007427803.1| | PREDICTED: transport and Golgi organization protein 2 homolog isoform X1 [Python bivittatus] | 3.0e-14 |
| habu1_s2318_g08419.t1 | gi|585675961|ref|XP_006890517.1| | PREDICTED: transport and Golgi organization protein 2 homolog isoform X3 [Elephantulus edwardii] | 6.0e-14 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.2 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.7 |
| Nose | 0.4 |
| Brain-1 | 0.5 |
| Eye | 0.8 |
| fetal fibroblast | 0.7 |
| venom gland-2 | 0.4 |
| Brain-2 | 0.2 |
| Spleen | 0.4 |
| Lung | 0.2 |
| Liver | 0.2 |
| Kidney | 0.7 |
| Pancreas | 0.9 |
| Small intestine | 0.6 |
| Large intestine | 0.5 |
| Stomach | 0.8 |
| heart | 1.2 |
| ovary | 0.3 |
| cheek muscle | 1.1 |
Transcript
| Transcript ID | habu1_s2318_g08419.t1 |
|---|---|
| Definition | - |
>habu1_s2318_g08419.t1 tgtcgaattcttcaaagccgaattcatcttcaaagtatcgattcagtttgactccgtcttcaaagttgccctctcctccg ttttctccctctttcctttgctgctacttgcccgcctgttgtacgtggcgcagaggttttccttgatgtgtccccctttt ttttgcttgtctcttattgggaggcaaaatgttcttcctggcgctgacaaacgtggtcccattgtgcaagcaaacatcgt tgttgaagaacaacagggcttctccgtcagcattggcggcttatgaacaatccgtggttaaggcatcaggccagaaagca aaagatcacgagttcaagtccggctttagccatgaaaccagctgggtgaccaatcaggagatgacacagagttctagtcc tgccttaggcatgaaagacaactgggtgactttgggccaatcaccaggagactggattcgtttaacgactgtggcaagaa agattgtaaaaaggggcaaaacgttctcagccactgcctctcttagcaacggaaatgtggggctcaaccgtcgtgccctg gtgaccaatttcttgacatcagaaatggacagctactcttatttgaagaaagtggcctcggaaggacacctttacaacgg ctttaatttgatcgcagcagacttaagacaaataaacagataaaaagaaaacaaacaaaatctcccaaggaattgtagga taactcatatgaacggctatgcagtgataccgcatctcaatccactggcaacgcctgtgatatattcattatttcgtgtt ttgtgtttcaaacttaaaattaacagactcagtttctgaggaattgctggtgtgtttttctttggggaaaaaaccaatct aaaaagaggaagctaaaaaatgattaatgcatgatgtacaaccgtgttctcttgggacttatatcatgcattttggaggg agaaaaggtattgaacttaaaggtgtttcagtctcgccggggaaaataaagtgataaatcagaactatattt |
|
Protein
| Protein ID | habu1_s2318_g08419.t1 |
|---|---|
| Definition | - |
>habu1_s2318_g08419.t1 MFFLALTNVVPLCKQTSLLKNNRASPSALAAYEQSVVKASGQKAKDHEFKSGFSHETSWVTNQEMTQSSSPALGMKDNWV TLGQSPGDWIRLTTVARKIVKRGKTFSATASLSNGNVGLNRRALVTNFLTSEMDSYSYLKKVASEGHLYNGFNLIAADLR QINR |
|