Gene
| Gene Model ID | habu1_s2347_g08522 |
|---|---|
| Locus | habu1_scaffold2347 : 568605 ... 611110 : - |
| To GenomeBrowser | habu1_scaffold2347:568605..611110 |
| Genes list of scaffold | habu1_scaffold2347 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2347_g08522.t1 | 1 | 1 | B12D | 16 | 78 | 5.8e-12 | 45.1 | 4.5e-16 | 6.6e-12 | 44.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2347_g08522.t1 | gi|557023544|ref|XP_006011985.1| | PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 4-like [Latimeria chalumnae] | 1.0e-15 |
| habu1_s2347_g08522.t1 | gi|449492994|ref|XP_004175434.1| | PREDICTED: cytochrome c oxidase subunit NDUFA4 [Taeniopygia guttata] | 1.0e-14 |
| habu1_s2347_g08522.t1 | gi|543253298|ref|XP_005418680.1| | PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 4 [Geospiza fortis] | 7.0e-14 |
| habu1_s2347_g08522.t1 | gi|350534630|ref|NP_001232158.1| | putative NADH dehydrogenase 1 alpha subcomplex 4 [Taeniopygia guttata] | 8.0e-14 |
| habu1_s2347_g08522.t1 | gi|543346401|ref|XP_005518888.1| | PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 4 [Pseudopodoces humilis] | 1.0e-13 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.1 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.0 |
| Nose | 0.0 |
| Brain-1 | 0.2 |
| Eye | 0.3 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.0 |
| Brain-2 | 0.3 |
| Spleen | 0.2 |
| Lung | 16.0 |
| Liver | 0.0 |
| Kidney | 0.0 |
| Pancreas | 0.0 |
| Small intestine | 0.0 |
| Large intestine | 0.0 |
| Stomach | 0.0 |
| heart | 0.3 |
| ovary | 0.2 |
| cheek muscle | 0.2 |
Transcript
| Transcript ID | habu1_s2347_g08522.t1 |
|---|---|
| Definition | - |
>habu1_s2347_g08522.t1 cctagaaggaaaggcgcgccgtcgaggaagatgtcccttcgactgagacaaatcacgcgggttccaacactctccttaat tctcatcaccggatttggacttgtgggcggtttttatatccttgcaaggaagaccttctttgttcctgaagtgagctggg agaagacaaaccaagaatcatggaataatcgggggcccagtgaccagtacaagttatttgccatgactatggactccaaa gacctgaagaaggatcgtccagactgctgaaagtgtcacattgagtcagttccctattcctgccacgttgaaggaaagtt gctggacttgtcattggcacagccgcatcttctgccctcttgtcaggcagaacatgtcagccttccaagcattctcgatt aagcttctgcctaagccaagataactttgcagctcttcttccctgcctctgcagtttgctggtgtcaactgcaaagatca cccatcaacatctgcagctcatccaccagaatcaaaagtgcacagtgacccgttctacctctgggaaatgcccctaaata ttgagctgacaaacaacttgtttataaaaaaaaacaaaaccaggagggcagggaggggggagagagggagagacaatgtg acacaaagcacattctttgtggtcccatttgtgcaaacttcttggttcagtatttttccttcccttcctacaaaaatcct tgaccttgatgtgtggtgtttcctgcctcccacgctcagttttaccattcccacagagacaggacagccccagcacctag atcagtggtggtgaaccttttgggtatggtgtgtacaaaatttgaaaaatgcctaatttgactcactacacacacacaca caccccagataaaagaaaagcaattctttacatat |
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Protein
| Protein ID | habu1_s2347_g08522.t1 |
|---|---|
| Definition | - |
>habu1_s2347_g08522.t1 MSLRLRQITRVPTLSLILITGFGLVGGFYILARKTFFVPEVSWEKTNQESWNNRGPSDQYKLFAMTMDSKDLKKDRPDC |
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